RNA–Protein interactions for RNA: ENST00000549404.5

PMEL-209, Transcript of premelanosome protein, humanhuman

APPRIS ALT2 TSL 5

Gene PMEL, Length 1,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-209ENST00000549404 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.85
PMEL-209ENST00000549404 CCDC180Q9P1Z9 1646 aa28.69■■■□□ 2.18
PMEL-209ENST00000549404 ABCC9O60706 1549 aa28.52■■■□□ 2.16
PMEL-209ENST00000549404 ZCCHC6Q5VYS8 1495 aaKnown RBP27.52■■■□□ 2
PMEL-209ENST00000549404 DCAF1Q9Y4B6 1507 aa27.2■■□□□ 1.95
PMEL-209ENST00000549404 RB1CC1Q8TDY2 1594 aa27.19■■□□□ 1.94
PMEL-209ENST00000549404 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
PMEL-209ENST00000549404 NACADO15069 1562 aa27.05■■□□□ 1.92
PMEL-209ENST00000549404 MYO15BQ96JP2 1530 aa26.99■■□□□ 1.91
PMEL-209ENST00000549404 DNAJC5BQ9UF47 199 aa26.9■■□□□ 1.9
PMEL-209ENST00000549404 PABPN1Q86U42 306 aaKnown RBP eCLIP26.58■■□□□ 1.84
PMEL-209ENST00000549404 UNC13AQ9UPW8 1703 aa26.54■■□□□ 1.84
PMEL-209ENST00000549404 SHROOM4Q9ULL8 1493 aa26.52■■□□□ 1.84
PMEL-209ENST00000549404 BICRAQ9NZM4 1560 aa26.45■■□□□ 1.83
PMEL-209ENST00000549404 SCRIBQ14160 1630 aa26.27■■□□□ 1.8
PMEL-209ENST00000549404 CC2D2AQ9P2K1 1620 aa25.79■■□□□ 1.72
PMEL-209ENST00000549404 EIF4G1Q04637 1599 aaKnown RBP25.76■■□□□ 1.71
PMEL-209ENST00000549404 CECR2Q9BXF3 1484 aa25.73■■□□□ 1.71
PMEL-209ENST00000549404 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
PMEL-209ENST00000549404 RSF1Q96T23 1441 aaPredicted RBP25.4■■□□□ 1.66
PMEL-209ENST00000549404 BAZ1AQ9NRL2 1556 aaPredicted RBP25.37■■□□□ 1.65
PMEL-209ENST00000549404 MROH2BQ7Z745 1585 aa25.3■■□□□ 1.64
PMEL-209ENST00000549404 SMARCA4P51532 1647 aa25.22■■□□□ 1.63
PMEL-209ENST00000549404 NCAPD3P42695 1498 aa25.04■■□□□ 1.6
PMEL-209ENST00000549404 WIZO95785 1651 aa25.03■■□□□ 1.6
PMEL-209ENST00000549404 PEG3Q9GZU2 1588 aa24.98■■□□□ 1.59
PMEL-209ENST00000549404 ATAD2BQ9ULI0 1458 aa24.92■■□□□ 1.58
PMEL-209ENST00000549404 SMARCA2P51531 1590 aa24.91■■□□□ 1.58
PMEL-209ENST00000549404 TOP2AP11388 1531 aaKnown RBP24.85■■□□□ 1.57
PMEL-209ENST00000549404 HMGXB3Q12766 1538 aa24.78■■□□□ 1.56
PMEL-209ENST00000549404 BAZ1BQ9UIG0 1483 aaKnown RBP24.75■■□□□ 1.55
PMEL-209ENST00000549404 DNAJC5Q9H3Z4 198 aa24.73■■□□□ 1.55
PMEL-209ENST00000549404 CUX2O14529 1486 aa24.66■■□□□ 1.54
PMEL-209ENST00000549404 CCDC88BA6NC98 1476 aa24.6■■□□□ 1.53
PMEL-209ENST00000549404 ERCC6Q03468 1493 aa24.59■■□□□ 1.53
PMEL-209ENST00000549404 NESP48681 1621 aa24.53■■□□□ 1.52
PMEL-209ENST00000549404 LAMC3Q9Y6N6 1575 aa24.39■■□□□ 1.49
PMEL-209ENST00000549404 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
PMEL-209ENST00000549404 THOC2Q8NI27 1593 aaKnown RBP24.28■■□□□ 1.48
PMEL-209ENST00000549404 PDS5BQ9NTI5 1447 aa24.26■■□□□ 1.47
PMEL-209ENST00000549404 CADPSQ9ULU8 1353 aa24.24■■□□□ 1.47
PMEL-209ENST00000549404 CFTRP13569 1480 aa24.16■■□□□ 1.46
PMEL-209ENST00000549404 KIF21AQ7Z4S6 1674 aa24.15■■□□□ 1.46
PMEL-209ENST00000549404 TRIM41Q8WV44 630 aa24.05■■□□□ 1.44
PMEL-209ENST00000549404 MRC2Q9UBG0 1479 aa24.01■■□□□ 1.43
PMEL-209ENST00000549404 WDR62O43379 1518 aa23.98■■□□□ 1.43
PMEL-209ENST00000549404 ABCC8Q09428 1581 aa23.92■■□□□ 1.42
PMEL-209ENST00000549404 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
PMEL-209ENST00000549404 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
PMEL-209ENST00000549404 CEP164Q9UPV0 1460 aa23.9■■□□□ 1.42
PMEL-209ENST00000549404 PRDM2Q13029 1718 aa23.86■■□□□ 1.41
PMEL-209ENST00000549404 SYNJ1O43426 1573 aa23.73■■□□□ 1.39
PMEL-209ENST00000549404 URB2Q14146 1524 aaKnown RBP23.72■■□□□ 1.39
PMEL-209ENST00000549404 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
PMEL-209ENST00000549404 CUX1P39880 1505 aa23.68■■□□□ 1.38
PMEL-209ENST00000549404 BIVM-ERCC5R4GMW8 1640 aa23.66■■□□□ 1.38
PMEL-209ENST00000549404 OSCARQ8IYS5 282 aa23.55■■□□□ 1.36
PMEL-209ENST00000549404 DNMBPQ6XZF7 1577 aa23.55■■□□□ 1.36
PMEL-209ENST00000549404 EEA1Q15075 1411 aa23.54■■□□□ 1.36
PMEL-209ENST00000549404 TOPBP1Q92547 1522 aa23.52■■□□□ 1.36
PMEL-209ENST00000549404 FAM9AQ8IZU1 332 aaPredicted RBP23.52■■□□□ 1.36
PMEL-209ENST00000549404 SOGA1O94964 1423 aa23.5■■□□□ 1.35
PMEL-209ENST00000549404 FGD5Q6ZNL6 1462 aa23.46■■□□□ 1.35
PMEL-209ENST00000549404 IFT140Q96RY7 1462 aa23.46■■□□□ 1.35
PMEL-209ENST00000549404 CSRNP3Q8WYN3 585 aa23.42■■□□□ 1.34
PMEL-209ENST00000549404 ZNF608Q9ULD9 1512 aaPredicted RBP23.41■■□□□ 1.34
PMEL-209ENST00000549404 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.33
PMEL-209ENST00000549404 POLA1P09884 1462 aaPredicted RBP23.38■■□□□ 1.33
PMEL-209ENST00000549404 KIF27Q86VH2 1401 aa23.36■■□□□ 1.33
PMEL-209ENST00000549404 LOC105371045A0A1W2PR82 267 aa23.36■■□□□ 1.33
PMEL-209ENST00000549404 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
PMEL-209ENST00000549404 RAD54L2Q9Y4B4 1467 aa23.28■■□□□ 1.32
PMEL-209ENST00000549404 TARBP1Q13395 1621 aaKnown RBP23.27■■□□□ 1.32
PMEL-209ENST00000549404 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
PMEL-209ENST00000549404 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.31
PMEL-209ENST00000549404 IGF1RP08069 1367 aa23.17■■□□□ 1.3
PMEL-209ENST00000549404 RIMBP3CA6NJZ7 1639 aa23.17■■□□□ 1.3
PMEL-209ENST00000549404 RIMBP3BA6NNM3 1639 aa23.17■■□□□ 1.3
PMEL-209ENST00000549404 RIMBP3Q9UFD9 1639 aa23.17■■□□□ 1.3
PMEL-209ENST00000549404 KIF21BO75037 1637 aa23.14■■□□□ 1.29
PMEL-209ENST00000549404 GOLGA3Q08378 1498 aa23.12■■□□□ 1.29
PMEL-209ENST00000549404 PRXQ9BXM0 1461 aa23.12■■□□□ 1.29
PMEL-209ENST00000549404 WDR97A6NE52 1622 aa23.12■■□□□ 1.29
PMEL-209ENST00000549404 ARHGEF11O15085 1522 aa23.12■■□□□ 1.29
PMEL-209ENST00000549404 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
PMEL-209ENST00000549404 EHMT2Q96KQ7 1210 aa23.11■■□□□ 1.29
PMEL-209ENST00000549404 GAPVD1Q14C86 1478 aa23.08■■□□□ 1.29
PMEL-209ENST00000549404 TNIKQ9UKE5 1360 aa23.07■■□□□ 1.28
PMEL-209ENST00000549404 UBTFP17480 764 aaKnown RBP23.06■■□□□ 1.28
PMEL-209ENST00000549404 ERICH3Q5RHP9 1530 aa23.06■■□□□ 1.28
PMEL-209ENST00000549404 CARMIL1Q5VZK9 1371 aa23.05■■□□□ 1.28
PMEL-209ENST00000549404 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
PMEL-209ENST00000549404 CHD1O14646 1710 aa23.03■■□□□ 1.28
PMEL-209ENST00000549404 RAPGEF2Q9Y4G8 1499 aa23.03■■□□□ 1.28
PMEL-209ENST00000549404 FBLN2P98095 1184 aa22.97■■□□□ 1.27
PMEL-209ENST00000549404 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
PMEL-209ENST00000549404 CYB5RLQ6IPT4 315 aa22.95■■□□□ 1.26
PMEL-209ENST00000549404 CUL7Q14999 1698 aa22.94■■□□□ 1.26
PMEL-209ENST00000549404 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
PMEL-209ENST00000549404 MAGI1Q96QZ7 1491 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms