RNA–Protein interactions for RNA: ENST00000548908.2

PPP1R12A-210, Transcript of protein phosphatase 1 regulatory subunit 12A, humanhuman

TSL 5

Gene PPP1R12A, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R12A-210ENST00000548908 NISCHQ9Y2I1 1504 aa17.09■□□□□ 0.33
PPP1R12A-210ENST00000548908 CCDC180Q9P1Z9 1646 aa15.7■□□□□ 0.1
PPP1R12A-210ENST00000548908 MYO15BQ96JP2 1530 aa14.82□□□□□ -0.04
PPP1R12A-210ENST00000548908 DCAF1Q9Y4B6 1507 aa14.72□□□□□ -0.05
PPP1R12A-210ENST00000548908 AEBP2Q6ZN18 517 aaPredicted RBP14.46□□□□□ -0.09
PPP1R12A-210ENST00000548908 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
PPP1R12A-210ENST00000548908 NACADO15069 1562 aa14.43□□□□□ -0.1
PPP1R12A-210ENST00000548908 SHROOM4Q9ULL8 1493 aa14.26□□□□□ -0.13
PPP1R12A-210ENST00000548908 RB1CC1Q8TDY2 1594 aa14.24□□□□□ -0.13
PPP1R12A-210ENST00000548908 UNC13AQ9UPW8 1703 aa14.14□□□□□ -0.15
PPP1R12A-210ENST00000548908 ABCC9O60706 1549 aa13.93□□□□□ -0.18
PPP1R12A-210ENST00000548908 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
PPP1R12A-210ENST00000548908 BICRAQ9NZM4 1560 aa13.84□□□□□ -0.19
PPP1R12A-210ENST00000548908 HRCP23327 699 aa13.62□□□□□ -0.23
PPP1R12A-210ENST00000548908 SUPT5HO00267 1087 aaKnown RBP13.59□□□□□ -0.23
PPP1R12A-210ENST00000548908 PEG3Q9GZU2 1588 aa13.56□□□□□ -0.24
PPP1R12A-210ENST00000548908 SCRIBQ14160 1630 aa13.44□□□□□ -0.26
PPP1R12A-210ENST00000548908 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
PPP1R12A-210ENST00000548908 RSF1Q96T23 1441 aaPredicted RBP13.33□□□□□ -0.28
PPP1R12A-210ENST00000548908 EIF4G1Q04637 1599 aaKnown RBP13.32□□□□□ -0.28
PPP1R12A-210ENST00000548908 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
PPP1R12A-210ENST00000548908 SMARCA4P51532 1647 aa13.3□□□□□ -0.28
PPP1R12A-210ENST00000548908 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
PPP1R12A-210ENST00000548908 PRDM2Q13029 1718 aa13.2□□□□□ -0.3
PPP1R12A-210ENST00000548908 TRIM26Q12899 539 aaPredicted RBP13.16□□□□□ -0.3
PPP1R12A-210ENST00000548908 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
PPP1R12A-210ENST00000548908 NCAPD3P42695 1498 aa13.15□□□□□ -0.3
PPP1R12A-210ENST00000548908 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
PPP1R12A-210ENST00000548908 ZEB1P37275 1124 aaPredicted RBP13.07□□□□□ -0.32
PPP1R12A-210ENST00000548908 MROH2BQ7Z745 1585 aa13.05□□□□□ -0.32
PPP1R12A-210ENST00000548908 WIZO95785 1651 aa13.04□□□□□ -0.32
PPP1R12A-210ENST00000548908 TOP2AP11388 1531 aaKnown RBP13□□□□□ -0.33
PPP1R12A-210ENST00000548908 LOC105371045A0A1W2PR82 267 aa12.99□□□□□ -0.33
PPP1R12A-210ENST00000548908 ATAD2BQ9ULI0 1458 aa12.99□□□□□ -0.33
PPP1R12A-210ENST00000548908 PPARGC1BQ86YN6 1023 aaKnown RBP12.97□□□□□ -0.33
PPP1R12A-210ENST00000548908 DCAF8L2P0C7V8 631 aa12.97□□□□□ -0.33
PPP1R12A-210ENST00000548908 CECR2Q9BXF3 1484 aa12.95□□□□□ -0.34
PPP1R12A-210ENST00000548908 WRNQ14191 1432 aaPredicted RBP eCLIP12.93□□□□□ -0.34
PPP1R12A-210ENST00000548908 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
PPP1R12A-210ENST00000548908 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
PPP1R12A-210ENST00000548908 EEA1Q15075 1411 aa12.8□□□□□ -0.36
PPP1R12A-210ENST00000548908 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
PPP1R12A-210ENST00000548908 WDR97A6NE52 1622 aa12.77□□□□□ -0.37
PPP1R12A-210ENST00000548908 BAZ1BQ9UIG0 1483 aaKnown RBP12.76□□□□□ -0.37
PPP1R12A-210ENST00000548908 KIF21BO75037 1637 aa12.74□□□□□ -0.37
PPP1R12A-210ENST00000548908 CCDC88BA6NC98 1476 aa12.71□□□□□ -0.37
PPP1R12A-210ENST00000548908 TNIKQ9UKE5 1360 aa12.68□□□□□ -0.38
PPP1R12A-210ENST00000548908 ABCC8Q09428 1581 aa12.66□□□□□ -0.38
PPP1R12A-210ENST00000548908 CFTRP13569 1480 aa12.66□□□□□ -0.38
PPP1R12A-210ENST00000548908 PABPN1Q86U42 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
PPP1R12A-210ENST00000548908 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
PPP1R12A-210ENST00000548908 CEP162Q5TB80 1403 aa12.62□□□□□ -0.39
PPP1R12A-210ENST00000548908 PHF23Q9BUL5 403 aaPredicted RBP12.62□□□□□ -0.39
PPP1R12A-210ENST00000548908 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
PPP1R12A-210ENST00000548908 BIVM-ERCC5R4GMW8 1640 aa12.58□□□□□ -0.39
PPP1R12A-210ENST00000548908 WDR62O43379 1518 aa12.58□□□□□ -0.4
PPP1R12A-210ENST00000548908 SCAF1Q9H7N4 1312 aaKnown RBP12.57□□□□□ -0.4
PPP1R12A-210ENST00000548908 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
PPP1R12A-210ENST00000548908 SYNJ1O43426 1573 aa12.54□□□□□ -0.4
PPP1R12A-210ENST00000548908 CUX2O14529 1486 aa12.52□□□□□ -0.41
PPP1R12A-210ENST00000548908 CEP164Q9UPV0 1460 aa12.52□□□□□ -0.41
PPP1R12A-210ENST00000548908 TOP2BQ02880 1626 aa12.5□□□□□ -0.41
PPP1R12A-210ENST00000548908 SOGA1O94964 1423 aa12.5□□□□□ -0.41
PPP1R12A-210ENST00000548908 ERICH3Q5RHP9 1530 aa12.48□□□□□ -0.41
PPP1R12A-210ENST00000548908 CADPSQ9ULU8 1353 aa12.48□□□□□ -0.41
PPP1R12A-210ENST00000548908 DNAJC5BQ9UF47 199 aa12.47□□□□□ -0.41
PPP1R12A-210ENST00000548908 DNMBPQ6XZF7 1577 aa12.45□□□□□ -0.42
PPP1R12A-210ENST00000548908 ACIN1Q9UKV3 1341 aaKnown RBP12.44□□□□□ -0.42
PPP1R12A-210ENST00000548908 RUSC2Q8N2Y8 1516 aa12.44□□□□□ -0.42
PPP1R12A-210ENST00000548908 FAM9AQ8IZU1 332 aaPredicted RBP12.43□□□□□ -0.42
PPP1R12A-210ENST00000548908 VPS8Q8N3P4 1428 aa12.41□□□□□ -0.42
PPP1R12A-210ENST00000548908 PDS5BQ9NTI5 1447 aa12.41□□□□□ -0.42
PPP1R12A-210ENST00000548908 MRC2Q9UBG0 1479 aa12.38□□□□□ -0.43
PPP1R12A-210ENST00000548908 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
PPP1R12A-210ENST00000548908 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
PPP1R12A-210ENST00000548908 CCER1Q8TC90 406 aaPredicted RBP12.32□□□□□ -0.44
PPP1R12A-210ENST00000548908 CLIP1P30622 1438 aa12.32□□□□□ -0.44
PPP1R12A-210ENST00000548908 PRXQ9BXM0 1461 aa12.32□□□□□ -0.44
PPP1R12A-210ENST00000548908 CLSPNQ9HAW4 1339 aa12.31□□□□□ -0.44
PPP1R12A-210ENST00000548908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
PPP1R12A-210ENST00000548908 DIEXFQ68CQ4 756 aaKnown RBP12.3□□□□□ -0.44
PPP1R12A-210ENST00000548908 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
PPP1R12A-210ENST00000548908 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
PPP1R12A-210ENST00000548908 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
PPP1R12A-210ENST00000548908 MYT1Q01538 1121 aa12.29□□□□□ -0.44
PPP1R12A-210ENST00000548908 CENPBP07199 599 aaPredicted RBP12.28□□□□□ -0.44
PPP1R12A-210ENST00000548908 MAP3K1Q13233 1512 aa12.28□□□□□ -0.44
PPP1R12A-210ENST00000548908 ARAP1Q96P48 1450 aa12.26□□□□□ -0.45
PPP1R12A-210ENST00000548908 RAPGEF2Q9Y4G8 1499 aa12.26□□□□□ -0.45
PPP1R12A-210ENST00000548908 ZNF316A6NFI3 1004 aaPredicted RBP12.26□□□□□ -0.45
PPP1R12A-210ENST00000548908 URB2Q14146 1524 aaKnown RBP12.25□□□□□ -0.45
PPP1R12A-210ENST00000548908 RRBP1Q9P2E9 1410 aaKnown RBP12.25□□□□□ -0.45
PPP1R12A-210ENST00000548908 TOPBP1Q92547 1522 aa12.23□□□□□ -0.45
PPP1R12A-210ENST00000548908 PBRM1Q86U86 1689 aa12.22□□□□□ -0.45
PPP1R12A-210ENST00000548908 IFT140Q96RY7 1462 aa12.21□□□□□ -0.45
PPP1R12A-210ENST00000548908 CUX1P39880 1505 aa12.21□□□□□ -0.45
PPP1R12A-210ENST00000548908 CFAP43Q8NDM7 1665 aa12.21□□□□□ -0.46
PPP1R12A-210ENST00000548908 NESP48681 1621 aa12.2□□□□□ -0.46
PPP1R12A-210ENST00000548908 ABCA10Q8WWZ4 1543 aa12.2□□□□□ -0.46
PPP1R12A-210ENST00000548908 CUL7Q14999 1698 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms