RNA–Protein interactions for RNA: ENST00000548511.5

C12orf29-204, Transcript of chromosome 12 open reading frame 29, humanhuman

TSL 2

Gene C12orf29, Length 3,079 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf29-204ENST00000548511 NISCHQ9Y2I1 1504 aa29.13■■■□□ 2.25
C12orf29-204ENST00000548511 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
C12orf29-204ENST00000548511 ZCCHC6Q5VYS8 1495 aaKnown RBP24.43■■□□□ 1.5
C12orf29-204ENST00000548511 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
C12orf29-204ENST00000548511 ABCC9O60706 1549 aa24.24■■□□□ 1.47
C12orf29-204ENST00000548511 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
C12orf29-204ENST00000548511 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
C12orf29-204ENST00000548511 MYO15BQ96JP2 1530 aa23.65■■□□□ 1.38
C12orf29-204ENST00000548511 NACADO15069 1562 aa23.62■■□□□ 1.37
C12orf29-204ENST00000548511 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
C12orf29-204ENST00000548511 SCRIBQ14160 1630 aa23.45■■□□□ 1.34
C12orf29-204ENST00000548511 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
C12orf29-204ENST00000548511 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.27
C12orf29-204ENST00000548511 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
C12orf29-204ENST00000548511 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
C12orf29-204ENST00000548511 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
C12orf29-204ENST00000548511 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
C12orf29-204ENST00000548511 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
C12orf29-204ENST00000548511 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
C12orf29-204ENST00000548511 SMARCA4P51532 1647 aa22.38■■□□□ 1.17
C12orf29-204ENST00000548511 WIZO95785 1651 aa22.36■■□□□ 1.17
C12orf29-204ENST00000548511 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
C12orf29-204ENST00000548511 ATAD2BQ9ULI0 1458 aa22.07■■□□□ 1.12
C12orf29-204ENST00000548511 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
C12orf29-204ENST00000548511 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
C12orf29-204ENST00000548511 SMARCA2P51531 1590 aa21.99■■□□□ 1.11
C12orf29-204ENST00000548511 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
C12orf29-204ENST00000548511 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
C12orf29-204ENST00000548511 CCDC88BA6NC98 1476 aa21.92■■□□□ 1.1
C12orf29-204ENST00000548511 NCAPD3P42695 1498 aa21.85■■□□□ 1.09
C12orf29-204ENST00000548511 CC2D2AQ9P2K1 1620 aa21.82■■□□□ 1.08
C12orf29-204ENST00000548511 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
C12orf29-204ENST00000548511 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
C12orf29-204ENST00000548511 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
C12orf29-204ENST00000548511 ABCC8Q09428 1581 aa21.49■■□□□ 1.03
C12orf29-204ENST00000548511 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
C12orf29-204ENST00000548511 CFTRP13569 1480 aa21.37■■□□□ 1.01
C12orf29-204ENST00000548511 CADPSQ9ULU8 1353 aa21.35■■□□□ 1.01
C12orf29-204ENST00000548511 WRNQ14191 1432 aaPredicted RBP eCLIP21.32■■□□□ 1
C12orf29-204ENST00000548511 NESP48681 1621 aa21.25■□□□□ 0.99
C12orf29-204ENST00000548511 LOC105371045A0A1W2PR82 267 aa21.24■□□□□ 0.99
C12orf29-204ENST00000548511 SYNJ1O43426 1573 aa21.21■□□□□ 0.99
C12orf29-204ENST00000548511 EHMT2Q96KQ7 1210 aa21.18■□□□□ 0.98
C12orf29-204ENST00000548511 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
C12orf29-204ENST00000548511 SOGA1O94964 1423 aa21.11■□□□□ 0.97
C12orf29-204ENST00000548511 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
C12orf29-204ENST00000548511 CUX1P39880 1505 aa21.08■□□□□ 0.96
C12orf29-204ENST00000548511 LAMC3Q9Y6N6 1575 aa21.08■□□□□ 0.96
C12orf29-204ENST00000548511 TOP2BQ02880 1626 aa21.06■□□□□ 0.96
C12orf29-204ENST00000548511 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
C12orf29-204ENST00000548511 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
C12orf29-204ENST00000548511 BIVM-ERCC5R4GMW8 1640 aa20.99■□□□□ 0.95
C12orf29-204ENST00000548511 CEP164Q9UPV0 1460 aa20.97■□□□□ 0.95
C12orf29-204ENST00000548511 CSRNP3Q8WYN3 585 aa20.93■□□□□ 0.94
C12orf29-204ENST00000548511 EEA1Q15075 1411 aa20.88■□□□□ 0.93
C12orf29-204ENST00000548511 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
C12orf29-204ENST00000548511 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
C12orf29-204ENST00000548511 TOPBP1Q92547 1522 aa20.86■□□□□ 0.93
C12orf29-204ENST00000548511 URB2Q14146 1524 aaKnown RBP20.85■□□□□ 0.93
C12orf29-204ENST00000548511 DNMBPQ6XZF7 1577 aa20.84■□□□□ 0.93
C12orf29-204ENST00000548511 POLA1P09884 1462 aaPredicted RBP20.78■□□□□ 0.92
C12orf29-204ENST00000548511 RAD54L2Q9Y4B4 1467 aa20.78■□□□□ 0.92
C12orf29-204ENST00000548511 KIF27Q86VH2 1401 aa20.77■□□□□ 0.92
C12orf29-204ENST00000548511 CUX2O14529 1486 aa20.77■□□□□ 0.92
C12orf29-204ENST00000548511 ERCC6Q03468 1493 aa20.76■□□□□ 0.91
C12orf29-204ENST00000548511 UBTFP17480 764 aaKnown RBP20.76■□□□□ 0.91
C12orf29-204ENST00000548511 MRC2Q9UBG0 1479 aa20.71■□□□□ 0.91
C12orf29-204ENST00000548511 GOLGA3Q08378 1498 aa20.67■□□□□ 0.9
C12orf29-204ENST00000548511 RAPGEF2Q9Y4G8 1499 aa20.64■□□□□ 0.9
C12orf29-204ENST00000548511 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
C12orf29-204ENST00000548511 TDRD9Q8NDG6 1382 aaKnown RBP20.62■□□□□ 0.89
C12orf29-204ENST00000548511 IGF1RP08069 1367 aa20.62■□□□□ 0.89
C12orf29-204ENST00000548511 KIF21BO75037 1637 aa20.6■□□□□ 0.89
C12orf29-204ENST00000548511 TNIKQ9UKE5 1360 aa20.59■□□□□ 0.89
C12orf29-204ENST00000548511 RANGAP1P46060 587 aaPredicted RBP20.59■□□□□ 0.89
C12orf29-204ENST00000548511 PRXQ9BXM0 1461 aa20.58■□□□□ 0.89
C12orf29-204ENST00000548511 WDR62O43379 1518 aa20.56■□□□□ 0.88
C12orf29-204ENST00000548511 CEP162Q5TB80 1403 aa20.53■□□□□ 0.88
C12orf29-204ENST00000548511 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
C12orf29-204ENST00000548511 THOC2Q8NI27 1593 aaKnown RBP20.5■□□□□ 0.87
C12orf29-204ENST00000548511 TARBP1Q13395 1621 aaKnown RBP20.5■□□□□ 0.87
C12orf29-204ENST00000548511 GAPVD1Q14C86 1478 aa20.49■□□□□ 0.87
C12orf29-204ENST00000548511 WDR97A6NE52 1622 aa20.48■□□□□ 0.87
C12orf29-204ENST00000548511 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
C12orf29-204ENST00000548511 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.87
C12orf29-204ENST00000548511 IFT140Q96RY7 1462 aa20.44■□□□□ 0.86
C12orf29-204ENST00000548511 ZNF608Q9ULD9 1512 aaPredicted RBP20.44■□□□□ 0.86
C12orf29-204ENST00000548511 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
C12orf29-204ENST00000548511 CLIP1P30622 1438 aa20.39■□□□□ 0.86
C12orf29-204ENST00000548511 PPARGC1BQ86YN6 1023 aaKnown RBP20.35■□□□□ 0.85
C12orf29-204ENST00000548511 CUL7Q14999 1698 aa20.32■□□□□ 0.84
C12orf29-204ENST00000548511 GRIN2BQ13224 1484 aa20.3■□□□□ 0.84
C12orf29-204ENST00000548511 PBRM1Q86U86 1689 aa20.28■□□□□ 0.84
C12orf29-204ENST00000548511 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
C12orf29-204ENST00000548511 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
C12orf29-204ENST00000548511 TTBK1Q5TCY1 1321 aaPredicted RBP20.23■□□□□ 0.83
C12orf29-204ENST00000548511 SNAPC4Q5SXM2 1469 aa20.22■□□□□ 0.83
C12orf29-204ENST00000548511 PCGF6Q9BYE7 350 aa20.22■□□□□ 0.83
C12orf29-204ENST00000548511 FBLN2P98095 1184 aa20.21■□□□□ 0.83
C12orf29-204ENST00000548511 P3H3Q8IVL6 736 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms