RNA–Protein interactions for RNA: ENST00000548496.1

KRT18-205, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-205ENST00000548496 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.23
KRT18-205ENST00000548496 CCDC180Q9P1Z9 1646 aa25.57■■□□□ 1.68
KRT18-205ENST00000548496 ABCC9O60706 1549 aa25.03■■□□□ 1.6
KRT18-205ENST00000548496 DCAF8L2P0C7V8 631 aa24.36■■□□□ 1.49
KRT18-205ENST00000548496 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
KRT18-205ENST00000548496 RB1CC1Q8TDY2 1594 aa24.02■■□□□ 1.44
KRT18-205ENST00000548496 NACADO15069 1562 aa24.01■■□□□ 1.43
KRT18-205ENST00000548496 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
KRT18-205ENST00000548496 MYO15BQ96JP2 1530 aa23.83■■□□□ 1.41
KRT18-205ENST00000548496 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
KRT18-205ENST00000548496 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
KRT18-205ENST00000548496 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
KRT18-205ENST00000548496 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
KRT18-205ENST00000548496 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
KRT18-205ENST00000548496 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
KRT18-205ENST00000548496 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
KRT18-205ENST00000548496 CECR2Q9BXF3 1484 aa22.64■■□□□ 1.21
KRT18-205ENST00000548496 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
KRT18-205ENST00000548496 SMARCA4P51532 1647 aa22.43■■□□□ 1.18
KRT18-205ENST00000548496 BAZ1AQ9NRL2 1556 aaPredicted RBP22.39■■□□□ 1.18
KRT18-205ENST00000548496 MROH2BQ7Z745 1585 aa22.38■■□□□ 1.17
KRT18-205ENST00000548496 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
KRT18-205ENST00000548496 SMARCA2P51531 1590 aa22.19■■□□□ 1.14
KRT18-205ENST00000548496 WIZO95785 1651 aa22.19■■□□□ 1.14
KRT18-205ENST00000548496 NCAPD3P42695 1498 aa22.17■■□□□ 1.14
KRT18-205ENST00000548496 RSF1Q96T23 1441 aaPredicted RBP22.17■■□□□ 1.14
KRT18-205ENST00000548496 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
KRT18-205ENST00000548496 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
KRT18-205ENST00000548496 HMGXB3Q12766 1538 aa22.04■■□□□ 1.12
KRT18-205ENST00000548496 SUPT5HO00267 1087 aaKnown RBP21.94■■□□□ 1.1
KRT18-205ENST00000548496 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
KRT18-205ENST00000548496 NESP48681 1621 aa21.73■■□□□ 1.07
KRT18-205ENST00000548496 CCDC88BA6NC98 1476 aa21.67■■□□□ 1.06
KRT18-205ENST00000548496 CADPSQ9ULU8 1353 aa21.58■■□□□ 1.04
KRT18-205ENST00000548496 LAMC3Q9Y6N6 1575 aa21.54■■□□□ 1.04
KRT18-205ENST00000548496 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
KRT18-205ENST00000548496 CFTRP13569 1480 aa21.46■■□□□ 1.03
KRT18-205ENST00000548496 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
KRT18-205ENST00000548496 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
KRT18-205ENST00000548496 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
KRT18-205ENST00000548496 PRDM2Q13029 1718 aa21.32■■□□□ 1
KRT18-205ENST00000548496 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
KRT18-205ENST00000548496 THOC2Q8NI27 1593 aaKnown RBP21.25■□□□□ 0.99
KRT18-205ENST00000548496 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
KRT18-205ENST00000548496 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.98
KRT18-205ENST00000548496 WDR62O43379 1518 aa21.1■□□□□ 0.97
KRT18-205ENST00000548496 CUX2O14529 1486 aa21.09■□□□□ 0.97
KRT18-205ENST00000548496 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
KRT18-205ENST00000548496 ABCC8Q09428 1581 aa20.99■□□□□ 0.95
KRT18-205ENST00000548496 DNMBPQ6XZF7 1577 aa20.99■□□□□ 0.95
KRT18-205ENST00000548496 CUX1P39880 1505 aa20.97■□□□□ 0.95
KRT18-205ENST00000548496 WRNQ14191 1432 aaPredicted RBP eCLIP20.88■□□□□ 0.93
KRT18-205ENST00000548496 FGD5Q6ZNL6 1462 aa20.87■□□□□ 0.93
KRT18-205ENST00000548496 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
KRT18-205ENST00000548496 RAD54L2Q9Y4B4 1467 aa20.86■□□□□ 0.93
KRT18-205ENST00000548496 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
KRT18-205ENST00000548496 SOGA1O94964 1423 aa20.81■□□□□ 0.92
KRT18-205ENST00000548496 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
KRT18-205ENST00000548496 ZNF608Q9ULD9 1512 aaPredicted RBP20.8■□□□□ 0.92
KRT18-205ENST00000548496 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
KRT18-205ENST00000548496 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
KRT18-205ENST00000548496 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
KRT18-205ENST00000548496 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
KRT18-205ENST00000548496 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.916e-10■■■■■ 31.6
KRT18-205ENST00000548496 EIF4G3O43432 1585 aaKnown RBP20.66■□□□□ 0.9
KRT18-205ENST00000548496 WDR97A6NE52 1622 aa20.64■□□□□ 0.89
KRT18-205ENST00000548496 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
KRT18-205ENST00000548496 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
KRT18-205ENST00000548496 GAPVD1Q14C86 1478 aa20.55■□□□□ 0.88
KRT18-205ENST00000548496 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
KRT18-205ENST00000548496 ABCA5Q8WWZ7 1642 aa20.52■□□□□ 0.88
KRT18-205ENST00000548496 FBLN2P98095 1184 aa20.51■□□□□ 0.87
KRT18-205ENST00000548496 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
KRT18-205ENST00000548496 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
KRT18-205ENST00000548496 SNAPC4Q5SXM2 1469 aa20.48■□□□□ 0.87
KRT18-205ENST00000548496 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
KRT18-205ENST00000548496 CHD1O14646 1710 aa20.42■□□□□ 0.86
KRT18-205ENST00000548496 KIF27Q86VH2 1401 aa20.42■□□□□ 0.86
KRT18-205ENST00000548496 CHMP7Q8WUX9 453 aaPredicted RBP20.39■□□□□ 0.85
KRT18-205ENST00000548496 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
KRT18-205ENST00000548496 OSCARQ8IYS5 282 aa20.37■□□□□ 0.85
KRT18-205ENST00000548496 IGF1RP08069 1367 aa20.35■□□□□ 0.85
KRT18-205ENST00000548496 ERICH3Q5RHP9 1530 aa20.34■□□□□ 0.85
KRT18-205ENST00000548496 DNAJC5Q9H3Z4 198 aa20.34■□□□□ 0.85
KRT18-205ENST00000548496 FAM9AQ8IZU1 332 aaPredicted RBP20.33■□□□□ 0.85
KRT18-205ENST00000548496 SYNJ2O15056 1496 aa20.32■□□□□ 0.84
KRT18-205ENST00000548496 ADAMTS12P58397 1594 aa20.32■□□□□ 0.84
KRT18-205ENST00000548496 FHAD1B1AJZ9 1412 aa20.28■□□□□ 0.84
KRT18-205ENST00000548496 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
KRT18-205ENST00000548496 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
KRT18-205ENST00000548496 CUL7Q14999 1698 aa20.2■□□□□ 0.82
KRT18-205ENST00000548496 CSRNP3Q8WYN3 585 aa20.18■□□□□ 0.82
KRT18-205ENST00000548496 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
KRT18-205ENST00000548496 EHMT2Q96KQ7 1210 aa20.14■□□□□ 0.81
KRT18-205ENST00000548496 CLASP1Q7Z460 1538 aa20.12■□□□□ 0.81
KRT18-205ENST00000548496 NUP160Q12769 1436 aa20.11■□□□□ 0.81
KRT18-205ENST00000548496 RAPGEF2Q9Y4G8 1499 aa20.11■□□□□ 0.81
KRT18-205ENST00000548496 EEA1Q15075 1411 aa20.08■□□□□ 0.8
KRT18-205ENST00000548496 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
KRT18-205ENST00000548496 RIMBP3CA6NJZ7 1639 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms