RNA–Protein interactions for RNA: ENST00000548363.1

TUBA1A-205, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-205ENST00000548363 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
TUBA1A-205ENST00000548363 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
TUBA1A-205ENST00000548363 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
TUBA1A-205ENST00000548363 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
TUBA1A-205ENST00000548363 ABCC9O60706 1549 aa19.8■□□□□ 0.76
TUBA1A-205ENST00000548363 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
TUBA1A-205ENST00000548363 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
TUBA1A-205ENST00000548363 DNAJC5Q9H3Z4 198 aa19.07■□□□□ 0.64
TUBA1A-205ENST00000548363 CCDC180Q9P1Z9 1646 aa18.68■□□□□ 0.58
TUBA1A-205ENST00000548363 FOXD1Q16676 465 aa18.66■□□□□ 0.58
TUBA1A-205ENST00000548363 POTEDQ86YR6 584 aa18.41■□□□□ 0.54
TUBA1A-205ENST00000548363 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
TUBA1A-205ENST00000548363 RB1CC1Q8TDY2 1594 aa18.28■□□□□ 0.52
TUBA1A-205ENST00000548363 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
TUBA1A-205ENST00000548363 NACADO15069 1562 aa17.87■□□□□ 0.45
TUBA1A-205ENST00000548363 UNC13AQ9UPW8 1703 aa17.81■□□□□ 0.44
TUBA1A-205ENST00000548363 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
TUBA1A-205ENST00000548363 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
TUBA1A-205ENST00000548363 MSH5O43196 834 aa17.75■□□□□ 0.43
TUBA1A-205ENST00000548363 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
TUBA1A-205ENST00000548363 DCAF8L2P0C7V8 631 aa17.64■□□□□ 0.41
TUBA1A-205ENST00000548363 CUX2O14529 1486 aa17.56■□□□□ 0.4
TUBA1A-205ENST00000548363 EIF4G1Q04637 1599 aaKnown RBP17.45■□□□□ 0.38
TUBA1A-205ENST00000548363 SHROOM4Q9ULL8 1493 aa17.42■□□□□ 0.38
TUBA1A-205ENST00000548363 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
TUBA1A-205ENST00000548363 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
TUBA1A-205ENST00000548363 PIAS4Q8N2W9 510 aaPredicted RBP17.35■□□□□ 0.37
TUBA1A-205ENST00000548363 DCAF1Q9Y4B6 1507 aa17.25■□□□□ 0.35
TUBA1A-205ENST00000548363 ERCC6Q03468 1493 aa17.18■□□□□ 0.34
TUBA1A-205ENST00000548363 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
TUBA1A-205ENST00000548363 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
TUBA1A-205ENST00000548363 ADRA2BP18089 450 aa16.9■□□□□ 0.3
TUBA1A-205ENST00000548363 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
TUBA1A-205ENST00000548363 OSCARQ8IYS5 282 aa16.67■□□□□ 0.26
TUBA1A-205ENST00000548363 THOC2Q8NI27 1593 aaKnown RBP16.66■□□□□ 0.26
TUBA1A-205ENST00000548363 NESP48681 1621 aa16.65■□□□□ 0.26
TUBA1A-205ENST00000548363 NCAPD3P42695 1498 aa16.56■□□□□ 0.24
TUBA1A-205ENST00000548363 TRHP20396 242 aaPredicted RBP16.56■□□□□ 0.24
TUBA1A-205ENST00000548363 ILDR1Q86SU0 546 aaPredicted RBP16.51■□□□□ 0.23
TUBA1A-205ENST00000548363 BAZ1AQ9NRL2 1556 aaPredicted RBP16.48■□□□□ 0.23
TUBA1A-205ENST00000548363 SMARCA2P51531 1590 aa16.46■□□□□ 0.23
TUBA1A-205ENST00000548363 RIMBP3CA6NJZ7 1639 aa16.45■□□□□ 0.22
TUBA1A-205ENST00000548363 RIMBP3BA6NNM3 1639 aa16.45■□□□□ 0.22
TUBA1A-205ENST00000548363 RIMBP3Q9UFD9 1639 aa16.45■□□□□ 0.22
TUBA1A-205ENST00000548363 CYB5RLQ6IPT4 315 aa16.35■□□□□ 0.21
TUBA1A-205ENST00000548363 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
TUBA1A-205ENST00000548363 PDS5BQ9NTI5 1447 aa16.33■□□□□ 0.2
TUBA1A-205ENST00000548363 LAMC3Q9Y6N6 1575 aa16.32■□□□□ 0.2
TUBA1A-205ENST00000548363 ATAD2BQ9ULI0 1458 aa16.3■□□□□ 0.2
TUBA1A-205ENST00000548363 ARHGEF11O15085 1522 aa16.29■□□□□ 0.2
TUBA1A-205ENST00000548363 SMARCA4P51532 1647 aa16.27■□□□□ 0.2
TUBA1A-205ENST00000548363 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
TUBA1A-205ENST00000548363 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
TUBA1A-205ENST00000548363 WDR62O43379 1518 aa16.19■□□□□ 0.18
TUBA1A-205ENST00000548363 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
TUBA1A-205ENST00000548363 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
TUBA1A-205ENST00000548363 BAZ1BQ9UIG0 1483 aaKnown RBP16.06■□□□□ 0.16
TUBA1A-205ENST00000548363 ARAP1Q96P48 1450 aa16.04■□□□□ 0.16
TUBA1A-205ENST00000548363 CADPSQ9ULU8 1353 aa16■□□□□ 0.15
TUBA1A-205ENST00000548363 WIZO95785 1651 aa15.95■□□□□ 0.14
TUBA1A-205ENST00000548363 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
TUBA1A-205ENST00000548363 RSF1Q96T23 1441 aaPredicted RBP15.83■□□□□ 0.12
TUBA1A-205ENST00000548363 FANCD2Q9BXW9 1451 aa15.78■□□□□ 0.12
TUBA1A-205ENST00000548363 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
TUBA1A-205ENST00000548363 KDM4FA0A1W2PPD8 638 aa15.74■□□□□ 0.11
TUBA1A-205ENST00000548363 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
TUBA1A-205ENST00000548363 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
TUBA1A-205ENST00000548363 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
TUBA1A-205ENST00000548363 CACNB1Q02641 598 aaPredicted RBP15.71■□□□□ 0.11
TUBA1A-205ENST00000548363 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
TUBA1A-205ENST00000548363 FBLN2P98095 1184 aa15.66■□□□□ 0.1
TUBA1A-205ENST00000548363 CHD1O14646 1710 aa15.65■□□□□ 0.1
TUBA1A-205ENST00000548363 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
TUBA1A-205ENST00000548363 FBXO41Q8TF61 875 aa15.64■□□□□ 0.09
TUBA1A-205ENST00000548363 CFTRP13569 1480 aa15.58■□□□□ 0.08
TUBA1A-205ENST00000548363 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
TUBA1A-205ENST00000548363 LMTK3Q96Q04 1460 aa15.56■□□□□ 0.08
TUBA1A-205ENST00000548363 CCDC88BA6NC98 1476 aa15.54■□□□□ 0.08
TUBA1A-205ENST00000548363 SOCS7O14512 581 aa15.54■□□□□ 0.08
TUBA1A-205ENST00000548363 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.08
TUBA1A-205ENST00000548363 EIF4G3O43432 1585 aaKnown RBP15.52■□□□□ 0.07
TUBA1A-205ENST00000548363 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
TUBA1A-205ENST00000548363 AQRO60306 1485 aaKnown RBP eCLIP15.47■□□□□ 0.07
TUBA1A-205ENST00000548363 CLASP1Q7Z460 1538 aa15.46■□□□□ 0.07
TUBA1A-205ENST00000548363 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
TUBA1A-205ENST00000548363 ILDR2Q71H61 639 aa15.4■□□□□ 0.06
TUBA1A-205ENST00000548363 HECW2Q9P2P5 1572 aa15.39■□□□□ 0.05
TUBA1A-205ENST00000548363 KIF13AQ9H1H9 1805 aa15.37■□□□□ 0.05
TUBA1A-205ENST00000548363 CHMP7Q8WUX9 453 aaPredicted RBP15.36■□□□□ 0.05
TUBA1A-205ENST00000548363 SYNJ1O43426 1573 aa15.35■□□□□ 0.05
TUBA1A-205ENST00000548363 TOPBP1Q92547 1522 aa15.33■□□□□ 0.05
TUBA1A-205ENST00000548363 SUPT5HO00267 1087 aaKnown RBP15.31■□□□□ 0.04
TUBA1A-205ENST00000548363 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
TUBA1A-205ENST00000548363 FAM69CQ0P6D2 419 aa15.28■□□□□ 0.04
TUBA1A-205ENST00000548363 TARBP1Q13395 1621 aaKnown RBP15.28■□□□□ 0.04
TUBA1A-205ENST00000548363 DNMBPQ6XZF7 1577 aa15.27■□□□□ 0.03
TUBA1A-205ENST00000548363 SYNJ2O15056 1496 aa15.27■□□□□ 0.03
TUBA1A-205ENST00000548363 ABCC8Q09428 1581 aa15.26■□□□□ 0.03
TUBA1A-205ENST00000548363 KDM6BO15054 1643 aa15.24■□□□□ 0.03
TUBA1A-205ENST00000548363 DISP3Q9P2K9 1392 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms