RNA–Protein interactions for RNA: ENST00000548288.5

PFKM-211, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-211ENST00000548288 NISCHQ9Y2I1 1504 aa18.77■□□□□ 0.6
PFKM-211ENST00000548288 CCDC180Q9P1Z9 1646 aa16.61■□□□□ 0.25
PFKM-211ENST00000548288 ABCC9O60706 1549 aa16.01■□□□□ 0.15
PFKM-211ENST00000548288 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
PFKM-211ENST00000548288 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
PFKM-211ENST00000548288 NACADO15069 1562 aa15.61■□□□□ 0.09
PFKM-211ENST00000548288 MYO15BQ96JP2 1530 aa15.59■□□□□ 0.09
PFKM-211ENST00000548288 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.09
PFKM-211ENST00000548288 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.08
PFKM-211ENST00000548288 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
PFKM-211ENST00000548288 UNC13AQ9UPW8 1703 aa15.08■□□□□ 0
PFKM-211ENST00000548288 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
PFKM-211ENST00000548288 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
PFKM-211ENST00000548288 BICRAQ9NZM4 1560 aa14.96□□□□□ -0.01
PFKM-211ENST00000548288 EIF4G1Q04637 1599 aaKnown RBP14.62□□□□□ -0.07
PFKM-211ENST00000548288 BAZ1AQ9NRL2 1556 aaPredicted RBP14.57□□□□□ -0.08
PFKM-211ENST00000548288 CECR2Q9BXF3 1484 aa14.52□□□□□ -0.08
PFKM-211ENST00000548288 SMARCA4P51532 1647 aa14.49□□□□□ -0.09
PFKM-211ENST00000548288 CC2D2AQ9P2K1 1620 aa14.49□□□□□ -0.09
PFKM-211ENST00000548288 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
PFKM-211ENST00000548288 SMARCA2P51531 1590 aa14.44□□□□□ -0.1
PFKM-211ENST00000548288 MROH2BQ7Z745 1585 aa14.41□□□□□ -0.1
PFKM-211ENST00000548288 ATAD2BQ9ULI0 1458 aa14.39□□□□□ -0.11
PFKM-211ENST00000548288 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
PFKM-211ENST00000548288 PEG3Q9GZU2 1588 aa14.38□□□□□ -0.11
PFKM-211ENST00000548288 RSF1Q96T23 1441 aaPredicted RBP14.37□□□□□ -0.11
PFKM-211ENST00000548288 BAZ1BQ9UIG0 1483 aaKnown RBP14.32□□□□□ -0.12
PFKM-211ENST00000548288 HMGXB3Q12766 1538 aa14.32□□□□□ -0.12
PFKM-211ENST00000548288 WIZO95785 1651 aa14.25□□□□□ -0.13
PFKM-211ENST00000548288 SUPT5HO00267 1087 aaKnown RBP14.21□□□□□ -0.13
PFKM-211ENST00000548288 TOP2AP11388 1531 aaKnown RBP14.18□□□□□ -0.14
PFKM-211ENST00000548288 AEBP2Q6ZN18 517 aaPredicted RBP14.07□□□□□ -0.16
PFKM-211ENST00000548288 CCDC88BA6NC98 1476 aa14□□□□□ -0.17
PFKM-211ENST00000548288 CADPSQ9ULU8 1353 aa13.99□□□□□ -0.17
PFKM-211ENST00000548288 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
PFKM-211ENST00000548288 PDS5BQ9NTI5 1447 aa13.94□□□□□ -0.18
PFKM-211ENST00000548288 CFTRP13569 1480 aa13.93□□□□□ -0.18
PFKM-211ENST00000548288 ERCC6Q03468 1493 aa13.88□□□□□ -0.19
PFKM-211ENST00000548288 NESP48681 1621 aa13.86□□□□□ -0.19
PFKM-211ENST00000548288 FANCD2Q9BXW9 1451 aa13.8□□□□□ -0.2
PFKM-211ENST00000548288 PRDM2Q13029 1718 aa13.8□□□□□ -0.2
PFKM-211ENST00000548288 CEP164Q9UPV0 1460 aa13.79□□□□□ -0.2
PFKM-211ENST00000548288 ABCC8Q09428 1581 aa13.72□□□□□ -0.21
PFKM-211ENST00000548288 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
PFKM-211ENST00000548288 MRC2Q9UBG0 1479 aa13.71□□□□□ -0.21
PFKM-211ENST00000548288 CUX2O14529 1486 aa13.65□□□□□ -0.22
PFKM-211ENST00000548288 THOC2Q8NI27 1593 aaKnown RBP13.62□□□□□ -0.23
PFKM-211ENST00000548288 WDR62O43379 1518 aa13.62□□□□□ -0.23
PFKM-211ENST00000548288 DNMBPQ6XZF7 1577 aa13.6□□□□□ -0.23
PFKM-211ENST00000548288 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
PFKM-211ENST00000548288 WRNQ14191 1432 aaPredicted RBP eCLIP13.58□□□□□ -0.24
PFKM-211ENST00000548288 TOPBP1Q92547 1522 aa13.58□□□□□ -0.24
PFKM-211ENST00000548288 CUX1P39880 1505 aa13.52□□□□□ -0.25
PFKM-211ENST00000548288 IFT140Q96RY7 1462 aa13.5□□□□□ -0.25
PFKM-211ENST00000548288 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
PFKM-211ENST00000548288 TRIM41Q8WV44 630 aa13.48□□□□□ -0.25
PFKM-211ENST00000548288 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
PFKM-211ENST00000548288 SOGA1O94964 1423 aa13.47□□□□□ -0.25
PFKM-211ENST00000548288 BIVM-ERCC5R4GMW8 1640 aa13.47□□□□□ -0.25
PFKM-211ENST00000548288 FGD5Q6ZNL6 1462 aa13.47□□□□□ -0.25
PFKM-211ENST00000548288 SYNJ1O43426 1573 aa13.44□□□□□ -0.26
PFKM-211ENST00000548288 WDR97A6NE52 1622 aa13.4□□□□□ -0.26
PFKM-211ENST00000548288 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
PFKM-211ENST00000548288 RAD54L2Q9Y4B4 1467 aa13.38□□□□□ -0.27
PFKM-211ENST00000548288 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
PFKM-211ENST00000548288 CHIC1Q5VXU3 224 aa13.36□□□□□ -0.27
PFKM-211ENST00000548288 TDRD9Q8NDG6 1382 aaKnown RBP13.33□□□□□ -0.27
PFKM-211ENST00000548288 KIF27Q86VH2 1401 aa13.33□□□□□ -0.28
PFKM-211ENST00000548288 GAPVD1Q14C86 1478 aa13.32□□□□□ -0.28
PFKM-211ENST00000548288 ZNF608Q9ULD9 1512 aaPredicted RBP13.32□□□□□ -0.28
PFKM-211ENST00000548288 AQRO60306 1485 aaKnown RBP eCLIP13.31□□□□□ -0.28
PFKM-211ENST00000548288 GRIN2BQ13224 1484 aa13.3□□□□□ -0.28
PFKM-211ENST00000548288 EIF4G3O43432 1585 aaKnown RBP13.29□□□□□ -0.28
PFKM-211ENST00000548288 ABCA5Q8WWZ7 1642 aa13.25□□□□□ -0.29
PFKM-211ENST00000548288 ERICH3Q5RHP9 1530 aa13.25□□□□□ -0.29
PFKM-211ENST00000548288 MAGI1Q96QZ7 1491 aaPredicted RBP13.25□□□□□ -0.29
PFKM-211ENST00000548288 EEA1Q15075 1411 aa13.25□□□□□ -0.29
PFKM-211ENST00000548288 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
PFKM-211ENST00000548288 FBLN2P98095 1184 aa13.21□□□□□ -0.29
PFKM-211ENST00000548288 PBRM1Q86U86 1689 aa13.21□□□□□ -0.3
PFKM-211ENST00000548288 SNAPC4Q5SXM2 1469 aa13.2□□□□□ -0.3
PFKM-211ENST00000548288 IGF1RP08069 1367 aa13.2□□□□□ -0.3
PFKM-211ENST00000548288 FHAD1B1AJZ9 1412 aa13.19□□□□□ -0.3
PFKM-211ENST00000548288 SYNJ2O15056 1496 aa13.18□□□□□ -0.3
PFKM-211ENST00000548288 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
PFKM-211ENST00000548288 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
PFKM-211ENST00000548288 CUL7Q14999 1698 aa13.16□□□□□ -0.3
PFKM-211ENST00000548288 CARMIL1Q5VZK9 1371 aa13.16□□□□□ -0.3
PFKM-211ENST00000548288 ADAMTS12P58397 1594 aa13.12□□□□□ -0.31
PFKM-211ENST00000548288 RUSC2Q8N2Y8 1516 aa13.1□□□□□ -0.31
PFKM-211ENST00000548288 FAM9AQ8IZU1 332 aaPredicted RBP13.1□□□□□ -0.31
PFKM-211ENST00000548288 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
PFKM-211ENST00000548288 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
PFKM-211ENST00000548288 CHD1O14646 1710 aa13.07□□□□□ -0.32
PFKM-211ENST00000548288 PRXQ9BXM0 1461 aa13.05□□□□□ -0.32
PFKM-211ENST00000548288 NUP160Q12769 1436 aa13.03□□□□□ -0.32
PFKM-211ENST00000548288 KIF21BO75037 1637 aa12.99□□□□□ -0.33
PFKM-211ENST00000548288 KIAA0586Q9BVV6 1533 aa12.99□□□□□ -0.33
PFKM-211ENST00000548288 DNAJC5Q9H3Z4 198 aa12.99□□□□□ -0.33
PFKM-211ENST00000548288 UBTFP17480 764 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms