RNA–Protein interactions for RNA: ENST00000548251.5

LETMD1-214, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-214ENST00000548251 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
LETMD1-214ENST00000548251 ABCC9O60706 1549 aa18.81■□□□□ 0.6
LETMD1-214ENST00000548251 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
LETMD1-214ENST00000548251 CCDC180Q9P1Z9 1646 aa17.7■□□□□ 0.42
LETMD1-214ENST00000548251 DNAJC5Q9H3Z4 198 aa17.7■□□□□ 0.42
LETMD1-214ENST00000548251 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
LETMD1-214ENST00000548251 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
LETMD1-214ENST00000548251 DCAF8L2P0C7V8 631 aa17.03■□□□□ 0.32
LETMD1-214ENST00000548251 NACADO15069 1562 aa17.02■□□□□ 0.32
LETMD1-214ENST00000548251 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
LETMD1-214ENST00000548251 UNC13AQ9UPW8 1703 aa16.98■□□□□ 0.31
LETMD1-214ENST00000548251 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
LETMD1-214ENST00000548251 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
LETMD1-214ENST00000548251 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
LETMD1-214ENST00000548251 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
LETMD1-214ENST00000548251 CUX2O14529 1486 aa16.48■□□□□ 0.23
LETMD1-214ENST00000548251 SHROOM4Q9ULL8 1493 aa16.48■□□□□ 0.23
LETMD1-214ENST00000548251 MYO15BQ96JP2 1530 aa16.46■□□□□ 0.23
LETMD1-214ENST00000548251 ERCC6Q03468 1493 aa16.24■□□□□ 0.19
LETMD1-214ENST00000548251 SCRIBQ14160 1630 aa16.22■□□□□ 0.19
LETMD1-214ENST00000548251 ZCCHC6Q5VYS8 1495 aaKnown RBP15.95■□□□□ 0.14
LETMD1-214ENST00000548251 NESP48681 1621 aa15.93■□□□□ 0.14
LETMD1-214ENST00000548251 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
LETMD1-214ENST00000548251 NCAPD3P42695 1498 aa15.81■□□□□ 0.12
LETMD1-214ENST00000548251 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
LETMD1-214ENST00000548251 AEBP2Q6ZN18 517 aaPredicted RBP15.76■□□□□ 0.11
LETMD1-214ENST00000548251 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
LETMD1-214ENST00000548251 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
LETMD1-214ENST00000548251 ATAD2BQ9ULI0 1458 aa15.64■□□□□ 0.09
LETMD1-214ENST00000548251 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
LETMD1-214ENST00000548251 BAZ1AQ9NRL2 1556 aaPredicted RBP15.56■□□□□ 0.08
LETMD1-214ENST00000548251 KIF21AQ7Z4S6 1674 aa15.56■□□□□ 0.08
LETMD1-214ENST00000548251 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
LETMD1-214ENST00000548251 LAMC3Q9Y6N6 1575 aa15.51■□□□□ 0.07
LETMD1-214ENST00000548251 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
LETMD1-214ENST00000548251 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
LETMD1-214ENST00000548251 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
LETMD1-214ENST00000548251 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
LETMD1-214ENST00000548251 CYB5RLQ6IPT4 315 aa15.47■□□□□ 0.07
LETMD1-214ENST00000548251 MRC2Q9UBG0 1479 aa15.42■□□□□ 0.06
LETMD1-214ENST00000548251 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
LETMD1-214ENST00000548251 WDR62O43379 1518 aa15.38■□□□□ 0.05
LETMD1-214ENST00000548251 ARHGEF11O15085 1522 aa15.38■□□□□ 0.05
LETMD1-214ENST00000548251 SMARCA4P51532 1647 aa15.32■□□□□ 0.04
LETMD1-214ENST00000548251 CADPSQ9ULU8 1353 aa15.32■□□□□ 0.04
LETMD1-214ENST00000548251 ILDR1Q86SU0 546 aaPredicted RBP15.31■□□□□ 0.04
LETMD1-214ENST00000548251 ARAP1Q96P48 1450 aa15.19■□□□□ 0.02
LETMD1-214ENST00000548251 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
LETMD1-214ENST00000548251 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
LETMD1-214ENST00000548251 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
LETMD1-214ENST00000548251 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
LETMD1-214ENST00000548251 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
LETMD1-214ENST00000548251 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
LETMD1-214ENST00000548251 FBLN2P98095 1184 aa14.97□□□□□ -0.01
LETMD1-214ENST00000548251 RSF1Q96T23 1441 aaPredicted RBP14.95□□□□□ -0.02
LETMD1-214ENST00000548251 CFTRP13569 1480 aa14.91□□□□□ -0.02
LETMD1-214ENST00000548251 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
LETMD1-214ENST00000548251 CHD1O14646 1710 aa14.88□□□□□ -0.03
LETMD1-214ENST00000548251 AQRO60306 1485 aaKnown RBP eCLIP14.84□□□□□ -0.039e-11■□□□□ 10.1
LETMD1-214ENST00000548251 KDM4FA0A1W2PPD8 638 aa14.83□□□□□ -0.04
LETMD1-214ENST00000548251 EIF4G3O43432 1585 aaKnown RBP14.81□□□□□ -0.04
LETMD1-214ENST00000548251 WIZO95785 1651 aa14.77□□□□□ -0.04
LETMD1-214ENST00000548251 TOPBP1Q92547 1522 aa14.71□□□□□ -0.05
LETMD1-214ENST00000548251 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
LETMD1-214ENST00000548251 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
LETMD1-214ENST00000548251 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
LETMD1-214ENST00000548251 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
LETMD1-214ENST00000548251 TDRD9Q8NDG6 1382 aaKnown RBP14.63□□□□□ -0.07
LETMD1-214ENST00000548251 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
LETMD1-214ENST00000548251 SYNJ1O43426 1573 aa14.57□□□□□ -0.08
LETMD1-214ENST00000548251 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
LETMD1-214ENST00000548251 RAD54L2Q9Y4B4 1467 aa14.55□□□□□ -0.08
LETMD1-214ENST00000548251 FBXO41Q8TF61 875 aa14.54□□□□□ -0.08
LETMD1-214ENST00000548251 KIF13AQ9H1H9 1805 aa14.54□□□□□ -0.08
LETMD1-214ENST00000548251 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.08
LETMD1-214ENST00000548251 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
LETMD1-214ENST00000548251 FAM69CQ0P6D2 419 aa14.51□□□□□ -0.09
LETMD1-214ENST00000548251 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
LETMD1-214ENST00000548251 ERCC6L2Q5T890 1561 aa14.51□□□□□ -0.09
LETMD1-214ENST00000548251 SOGA1O94964 1423 aa14.49□□□□□ -0.09
LETMD1-214ENST00000548251 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
LETMD1-214ENST00000548251 SYNJ2O15056 1496 aa14.44□□□□□ -0.1
LETMD1-214ENST00000548251 MAGI1Q96QZ7 1491 aaPredicted RBP14.44□□□□□ -0.1
LETMD1-214ENST00000548251 HECW2Q9P2P5 1572 aa14.43□□□□□ -0.1
LETMD1-214ENST00000548251 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
LETMD1-214ENST00000548251 GRIN2BQ13224 1484 aa14.39□□□□□ -0.11
LETMD1-214ENST00000548251 LMTK3Q96Q04 1460 aa14.39□□□□□ -0.11
LETMD1-214ENST00000548251 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
LETMD1-214ENST00000548251 ILDR2Q71H61 639 aa14.37□□□□□ -0.11
LETMD1-214ENST00000548251 KDM6BO15054 1643 aa14.37□□□□□ -0.11
LETMD1-214ENST00000548251 SOCS7O14512 581 aa14.35□□□□□ -0.11
LETMD1-214ENST00000548251 ADGRL1O94910 1474 aa14.35□□□□□ -0.11
LETMD1-214ENST00000548251 CEP170Q5SW79 1584 aa14.32□□□□□ -0.12
LETMD1-214ENST00000548251 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
LETMD1-214ENST00000548251 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
LETMD1-214ENST00000548251 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
LETMD1-214ENST00000548251 TSPOAP1O95153 1857 aa14.26□□□□□ -0.13
LETMD1-214ENST00000548251 DIP2BQ9P265 1576 aa14.26□□□□□ -0.13
LETMD1-214ENST00000548251 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
LETMD1-214ENST00000548251 NUP160Q12769 1436 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms