RNA–Protein interactions for RNA: ENST00000548123.1

RDH5-205, Transcript of retinol dehydrogenase 5, humanhuman

TSL 3

Gene RDH5, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH5-205ENST00000548123 NISCHQ9Y2I1 1504 aa36.16■■■■□ 3.38
RDH5-205ENST00000548123 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
RDH5-205ENST00000548123 ABCC9O60706 1549 aa31.1■■■□□ 2.57
RDH5-205ENST00000548123 ZCCHC6Q5VYS8 1495 aaKnown RBP30.17■■■□□ 2.42
RDH5-205ENST00000548123 NACADO15069 1562 aa30.1■■■□□ 2.41
RDH5-205ENST00000548123 RB1CC1Q8TDY2 1594 aa30.06■■■□□ 2.4
RDH5-205ENST00000548123 DCAF8L2P0C7V8 631 aa30.04■■■□□ 2.4
RDH5-205ENST00000548123 MYO15BQ96JP2 1530 aa30.01■■■□□ 2.4
RDH5-205ENST00000548123 DCAF1Q9Y4B6 1507 aa29.96■■■□□ 2.39
RDH5-205ENST00000548123 UNC13AQ9UPW8 1703 aa29.44■■■□□ 2.3
RDH5-205ENST00000548123 SCRIBQ14160 1630 aa29.23■■■□□ 2.27
RDH5-205ENST00000548123 BICRAQ9NZM4 1560 aa29.16■■■□□ 2.26
RDH5-205ENST00000548123 PABPN1Q86U42 306 aaKnown RBP eCLIP29.08■■■□□ 2.25
RDH5-205ENST00000548123 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
RDH5-205ENST00000548123 EIF4G1Q04637 1599 aaKnown RBP28.35■■■□□ 2.13
RDH5-205ENST00000548123 DNAJC5BQ9UF47 199 aa28.34■■■□□ 2.13
RDH5-205ENST00000548123 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
RDH5-205ENST00000548123 CECR2Q9BXF3 1484 aa28.12■■■□□ 2.09
RDH5-205ENST00000548123 SMARCA4P51532 1647 aa28.02■■■□□ 2.08
RDH5-205ENST00000548123 BAZ1AQ9NRL2 1556 aaPredicted RBP28.01■■■□□ 2.07
RDH5-205ENST00000548123 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
RDH5-205ENST00000548123 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
RDH5-205ENST00000548123 ATAD2BQ9ULI0 1458 aa27.79■■■□□ 2.04
RDH5-205ENST00000548123 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
RDH5-205ENST00000548123 NCAPD3P42695 1498 aa27.76■■■□□ 2.03
RDH5-205ENST00000548123 HMGXB3Q12766 1538 aa27.65■■■□□ 2.02
RDH5-205ENST00000548123 RSF1Q96T23 1441 aaPredicted RBP27.62■■■□□ 2.01
RDH5-205ENST00000548123 WIZO95785 1651 aa27.59■■■□□ 2.01
RDH5-205ENST00000548123 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
RDH5-205ENST00000548123 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
RDH5-205ENST00000548123 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
RDH5-205ENST00000548123 LAMC3Q9Y6N6 1575 aa27■■□□□ 1.91
RDH5-205ENST00000548123 NESP48681 1621 aa26.99■■□□□ 1.91
RDH5-205ENST00000548123 CCDC88BA6NC98 1476 aa26.97■■□□□ 1.91
RDH5-205ENST00000548123 CADPSQ9ULU8 1353 aa26.95■■□□□ 1.9
RDH5-205ENST00000548123 CFTRP13569 1480 aa26.85■■□□□ 1.89
RDH5-205ENST00000548123 ERCC6Q03468 1493 aa26.79■■□□□ 1.88
RDH5-205ENST00000548123 PDS5BQ9NTI5 1447 aa26.78■■□□□ 1.88
RDH5-205ENST00000548123 PRDM2Q13029 1718 aa26.73■■□□□ 1.87
RDH5-205ENST00000548123 KIF21AQ7Z4S6 1674 aa26.72■■□□□ 1.87
RDH5-205ENST00000548123 FANCD2Q9BXW9 1451 aa26.63■■□□□ 1.85
RDH5-205ENST00000548123 CEP164Q9UPV0 1460 aa26.57■■□□□ 1.84
RDH5-205ENST00000548123 THOC2Q8NI27 1593 aaKnown RBP26.57■■□□□ 1.84
RDH5-205ENST00000548123 MRC2Q9UBG0 1479 aa26.49■■□□□ 1.83
RDH5-205ENST00000548123 CUX2O14529 1486 aa26.46■■□□□ 1.83
RDH5-205ENST00000548123 WDR62O43379 1518 aa26.41■■□□□ 1.82
RDH5-205ENST00000548123 URB2Q14146 1524 aaKnown RBP26.35■■□□□ 1.81
RDH5-205ENST00000548123 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
RDH5-205ENST00000548123 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
RDH5-205ENST00000548123 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
RDH5-205ENST00000548123 CUX1P39880 1505 aa26.13■■□□□ 1.77
RDH5-205ENST00000548123 WRNQ14191 1432 aaPredicted RBP eCLIP26.04■■□□□ 1.76
RDH5-205ENST00000548123 POLA1P09884 1462 aaPredicted RBP26.03■■□□□ 1.76
RDH5-205ENST00000548123 IFT140Q96RY7 1462 aa26.01■■□□□ 1.75
RDH5-205ENST00000548123 FGD5Q6ZNL6 1462 aa25.99■■□□□ 1.75
RDH5-205ENST00000548123 BIVM-ERCC5R4GMW8 1640 aa25.99■■□□□ 1.75
RDH5-205ENST00000548123 TOP2BQ02880 1626 aa25.98■■□□□ 1.75
RDH5-205ENST00000548123 SYNJ1O43426 1573 aa25.96■■□□□ 1.75
RDH5-205ENST00000548123 TARBP1Q13395 1621 aaKnown RBP25.96■■□□□ 1.75
RDH5-205ENST00000548123 SOGA1O94964 1423 aa25.92■■□□□ 1.74
RDH5-205ENST00000548123 RAD54L2Q9Y4B4 1467 aa25.9■■□□□ 1.74
RDH5-205ENST00000548123 ZNF608Q9ULD9 1512 aaPredicted RBP25.86■■□□□ 1.73
RDH5-205ENST00000548123 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
RDH5-205ENST00000548123 EIF4G3O43432 1585 aaKnown RBP25.79■■□□□ 1.72
RDH5-205ENST00000548123 ABCA10Q8WWZ4 1543 aa25.77■■□□□ 1.72
RDH5-205ENST00000548123 AQRO60306 1485 aaKnown RBP eCLIP25.74■■□□□ 1.71
RDH5-205ENST00000548123 TDRD9Q8NDG6 1382 aaKnown RBP25.73■■□□□ 1.71
RDH5-205ENST00000548123 ABCA5Q8WWZ7 1642 aa25.66■■□□□ 1.7
RDH5-205ENST00000548123 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
RDH5-205ENST00000548123 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
RDH5-205ENST00000548123 PBRM1Q86U86 1689 aa25.59■■□□□ 1.69
RDH5-205ENST00000548123 TRIM41Q8WV44 630 aa25.55■■□□□ 1.68
RDH5-205ENST00000548123 MAGI1Q96QZ7 1491 aaPredicted RBP25.52■■□□□ 1.68
RDH5-205ENST00000548123 SNAPC4Q5SXM2 1469 aa25.51■■□□□ 1.67
RDH5-205ENST00000548123 ERICH3Q5RHP9 1530 aa25.47■■□□□ 1.67
RDH5-205ENST00000548123 KIF27Q86VH2 1401 aa25.47■■□□□ 1.67
RDH5-205ENST00000548123 CHD1O14646 1710 aa25.45■■□□□ 1.66
RDH5-205ENST00000548123 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
RDH5-205ENST00000548123 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
RDH5-205ENST00000548123 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
RDH5-205ENST00000548123 ADAMTS12P58397 1594 aa25.38■■□□□ 1.65
RDH5-205ENST00000548123 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
RDH5-205ENST00000548123 FBLN2P98095 1184 aa25.35■■□□□ 1.65
RDH5-205ENST00000548123 CHMP7Q8WUX9 453 aaPredicted RBP25.35■■□□□ 1.65
RDH5-205ENST00000548123 IGF1RP08069 1367 aa25.34■■□□□ 1.65
RDH5-205ENST00000548123 FHAD1B1AJZ9 1412 aa25.34■■□□□ 1.65
RDH5-205ENST00000548123 RUSC2Q8N2Y8 1516 aa25.3■■□□□ 1.64
RDH5-205ENST00000548123 CUL7Q14999 1698 aa25.29■■□□□ 1.64
RDH5-205ENST00000548123 GRIN2AQ12879 1464 aa25.27■■□□□ 1.64
RDH5-205ENST00000548123 CARMIL1Q5VZK9 1371 aa25.19■■□□□ 1.62
RDH5-205ENST00000548123 NUP160Q12769 1436 aa25.16■■□□□ 1.62
RDH5-205ENST00000548123 CLASP1Q7Z460 1538 aa25.16■■□□□ 1.62
RDH5-205ENST00000548123 EEA1Q15075 1411 aa25.15■■□□□ 1.62
RDH5-205ENST00000548123 CEP170Q5SW79 1584 aa25.14■■□□□ 1.61
RDH5-205ENST00000548123 RAPGEF2Q9Y4G8 1499 aa25.08■■□□□ 1.6
RDH5-205ENST00000548123 CSRNP3Q8WYN3 585 aa25.07■■□□□ 1.6
RDH5-205ENST00000548123 PRXQ9BXM0 1461 aa25.06■■□□□ 1.6
RDH5-205ENST00000548123 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
RDH5-205ENST00000548123 FAM9AQ8IZU1 332 aaPredicted RBP24.98■■□□□ 1.59
RDH5-205ENST00000548123 KIAA0586Q9BVV6 1533 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms