RNA–Protein interactions for RNA: ENST00000547994.5

PAN2-208, Transcript of poly(A) specific ribonuclease subunit PAN2, humanhuman

TSL 1 (best)

Gene PAN2, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN2-208ENST00000547994 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
PAN2-208ENST00000547994 CCDC180Q9P1Z9 1646 aa20.61■□□□□ 0.89
PAN2-208ENST00000547994 DCAF8L2P0C7V8 631 aa20.09■□□□□ 0.81
PAN2-208ENST00000547994 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
PAN2-208ENST00000547994 ABCC9O60706 1549 aa19.87■□□□□ 0.77
PAN2-208ENST00000547994 SHROOM4Q9ULL8 1493 aa19.75■□□□□ 0.75
PAN2-208ENST00000547994 DCAF1Q9Y4B6 1507 aa19.58■□□□□ 0.72
PAN2-208ENST00000547994 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
PAN2-208ENST00000547994 NACADO15069 1562 aa19.3■□□□□ 0.68
PAN2-208ENST00000547994 SCRIBQ14160 1630 aa19.2■□□□□ 0.66
PAN2-208ENST00000547994 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
PAN2-208ENST00000547994 SUPT5HO00267 1087 aaKnown RBP19.01■□□□□ 0.63
PAN2-208ENST00000547994 PABPN1Q86U42 306 aaKnown RBP eCLIP18.87■□□□□ 0.61
PAN2-208ENST00000547994 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
PAN2-208ENST00000547994 CECR2Q9BXF3 1484 aa18.68■□□□□ 0.58
PAN2-208ENST00000547994 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
PAN2-208ENST00000547994 RSF1Q96T23 1441 aaPredicted RBP18.58■□□□□ 0.56
PAN2-208ENST00000547994 MROH2BQ7Z745 1585 aa18.5■□□□□ 0.55
PAN2-208ENST00000547994 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
PAN2-208ENST00000547994 WIZO95785 1651 aa18.32■□□□□ 0.52
PAN2-208ENST00000547994 SMARCA4P51532 1647 aa18.3■□□□□ 0.52
PAN2-208ENST00000547994 EIF4G1Q04637 1599 aaKnown RBP18.09■□□□□ 0.49
PAN2-208ENST00000547994 ATAD2BQ9ULI0 1458 aa18.09■□□□□ 0.49
PAN2-208ENST00000547994 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
PAN2-208ENST00000547994 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
PAN2-208ENST00000547994 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
PAN2-208ENST00000547994 CCDC88BA6NC98 1476 aa17.98■□□□□ 0.47
PAN2-208ENST00000547994 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
PAN2-208ENST00000547994 BAZ1BQ9UIG0 1483 aaKnown RBP17.97■□□□□ 0.47
PAN2-208ENST00000547994 NCAPD3P42695 1498 aa17.89■□□□□ 0.46
PAN2-208ENST00000547994 CC2D2AQ9P2K1 1620 aa17.85■□□□□ 0.45
PAN2-208ENST00000547994 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
PAN2-208ENST00000547994 HMGXB3Q12766 1538 aa17.77■□□□□ 0.44
PAN2-208ENST00000547994 DNAJC5BQ9UF47 199 aa17.73■□□□□ 0.43
PAN2-208ENST00000547994 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
PAN2-208ENST00000547994 FAM9AQ8IZU1 332 aaPredicted RBP17.6■□□□□ 0.41
PAN2-208ENST00000547994 LOC105371045A0A1W2PR82 267 aa17.52■□□□□ 0.4
PAN2-208ENST00000547994 CFTRP13569 1480 aa17.5■□□□□ 0.39
PAN2-208ENST00000547994 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
PAN2-208ENST00000547994 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.39
PAN2-208ENST00000547994 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
PAN2-208ENST00000547994 NESP48681 1621 aa17.44■□□□□ 0.38
PAN2-208ENST00000547994 SYNJ1O43426 1573 aa17.37■□□□□ 0.37
PAN2-208ENST00000547994 SOGA1O94964 1423 aa17.34■□□□□ 0.37
PAN2-208ENST00000547994 FANCD2Q9BXW9 1451 aa17.3■□□□□ 0.36
PAN2-208ENST00000547994 RUSC2Q8N2Y8 1516 aa17.3■□□□□ 0.36
PAN2-208ENST00000547994 CUX1P39880 1505 aa17.27■□□□□ 0.36
PAN2-208ENST00000547994 TOP2BQ02880 1626 aa17.23■□□□□ 0.35
PAN2-208ENST00000547994 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
PAN2-208ENST00000547994 CSRNP3Q8WYN3 585 aa17.2■□□□□ 0.34
PAN2-208ENST00000547994 PDS5BQ9NTI5 1447 aa17.18■□□□□ 0.34
PAN2-208ENST00000547994 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
PAN2-208ENST00000547994 BIVM-ERCC5R4GMW8 1640 aa17.16■□□□□ 0.34
PAN2-208ENST00000547994 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
PAN2-208ENST00000547994 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
PAN2-208ENST00000547994 EEA1Q15075 1411 aa17.09■□□□□ 0.33
PAN2-208ENST00000547994 URB2Q14146 1524 aaKnown RBP17.08■□□□□ 0.33
PAN2-208ENST00000547994 TOPBP1Q92547 1522 aa17.08■□□□□ 0.33
PAN2-208ENST00000547994 KIF21AQ7Z4S6 1674 aa17.06■□□□□ 0.32
PAN2-208ENST00000547994 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
PAN2-208ENST00000547994 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
PAN2-208ENST00000547994 DNMBPQ6XZF7 1577 aa17.04■□□□□ 0.32
PAN2-208ENST00000547994 CUX2O14529 1486 aa17.03■□□□□ 0.32
PAN2-208ENST00000547994 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.32
PAN2-208ENST00000547994 KIF27Q86VH2 1401 aa17.01■□□□□ 0.31
PAN2-208ENST00000547994 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
PAN2-208ENST00000547994 RANGAP1P46060 587 aaPredicted RBP16.95■□□□□ 0.3
PAN2-208ENST00000547994 RAPGEF2Q9Y4G8 1499 aa16.94■□□□□ 0.3
PAN2-208ENST00000547994 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
PAN2-208ENST00000547994 MRC2Q9UBG0 1479 aa16.94■□□□□ 0.3
PAN2-208ENST00000547994 IGF1RP08069 1367 aa16.93■□□□□ 0.3
PAN2-208ENST00000547994 GOLGA3Q08378 1498 aa16.92■□□□□ 0.3
PAN2-208ENST00000547994 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.3
PAN2-208ENST00000547994 ABCA10Q8WWZ4 1543 aa16.89■□□□□ 0.29
PAN2-208ENST00000547994 PRXQ9BXM0 1461 aa16.87■□□□□ 0.29
PAN2-208ENST00000547994 KIF21BO75037 1637 aa16.85■□□□□ 0.29
PAN2-208ENST00000547994 CEP162Q5TB80 1403 aa16.84■□□□□ 0.29
PAN2-208ENST00000547994 CARMIL1Q5VZK9 1371 aa16.84■□□□□ 0.29
PAN2-208ENST00000547994 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.281e-8■■■□□ 16.5
PAN2-208ENST00000547994 WDR62O43379 1518 aa16.8■□□□□ 0.28
PAN2-208ENST00000547994 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
PAN2-208ENST00000547994 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
PAN2-208ENST00000547994 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
PAN2-208ENST00000547994 ZNF608Q9ULD9 1512 aaPredicted RBP16.76■□□□□ 0.27
PAN2-208ENST00000547994 THOC2Q8NI27 1593 aaKnown RBP16.75■□□□□ 0.27
PAN2-208ENST00000547994 ERICH3Q5RHP9 1530 aa16.74■□□□□ 0.27
PAN2-208ENST00000547994 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
PAN2-208ENST00000547994 CLIP1P30622 1438 aa16.72■□□□□ 0.27
PAN2-208ENST00000547994 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
PAN2-208ENST00000547994 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
PAN2-208ENST00000547994 TTBK1Q5TCY1 1321 aaPredicted RBP16.67■□□□□ 0.26
PAN2-208ENST00000547994 PCGF6Q9BYE7 350 aa16.66■□□□□ 0.26
PAN2-208ENST00000547994 P3H3Q8IVL6 736 aa16.63■□□□□ 0.25
PAN2-208ENST00000547994 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
PAN2-208ENST00000547994 FBLN2P98095 1184 aa16.6■□□□□ 0.25
PAN2-208ENST00000547994 CUL7Q14999 1698 aa16.59■□□□□ 0.25
PAN2-208ENST00000547994 EIF4G3O43432 1585 aaKnown RBP16.57■□□□□ 0.24
PAN2-208ENST00000547994 FHAD1B1AJZ9 1412 aa16.57■□□□□ 0.24
PAN2-208ENST00000547994 SNAPC4Q5SXM2 1469 aa16.56■□□□□ 0.24
PAN2-208ENST00000547994 PBRM1Q86U86 1689 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms