RNA–Protein interactions for RNA: ENST00000547738.5

KIRREL3-208, Transcript of kirre like nephrin family adhesion molecule 3, humanhuman

TSL 2

Gene KIRREL3, Length 2,019 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIRREL3-208ENST00000547738 NISCHQ9Y2I1 1504 aa28.74■■■□□ 2.19
KIRREL3-208ENST00000547738 CCDC180Q9P1Z9 1646 aa25.18■■□□□ 1.62
KIRREL3-208ENST00000547738 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
KIRREL3-208ENST00000547738 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.4
KIRREL3-208ENST00000547738 ABCC9O60706 1549 aa23.75■■□□□ 1.39
KIRREL3-208ENST00000547738 DCAF8L2P0C7V8 631 aa23.65■■□□□ 1.38
KIRREL3-208ENST00000547738 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
KIRREL3-208ENST00000547738 NACADO15069 1562 aa23.45■■□□□ 1.34
KIRREL3-208ENST00000547738 RB1CC1Q8TDY2 1594 aa23.26■■□□□ 1.31
KIRREL3-208ENST00000547738 SHROOM4Q9ULL8 1493 aa23.25■■□□□ 1.31
KIRREL3-208ENST00000547738 SCRIBQ14160 1630 aa23.03■■□□□ 1.28
KIRREL3-208ENST00000547738 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.24
KIRREL3-208ENST00000547738 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
KIRREL3-208ENST00000547738 SUPT5HO00267 1087 aaKnown RBP22.34■■□□□ 1.17
KIRREL3-208ENST00000547738 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
KIRREL3-208ENST00000547738 CECR2Q9BXF3 1484 aa22.27■■□□□ 1.15
KIRREL3-208ENST00000547738 RSF1Q96T23 1441 aaPredicted RBP22.22■■□□□ 1.15
KIRREL3-208ENST00000547738 BAZ1AQ9NRL2 1556 aaPredicted RBP22.22■■□□□ 1.15
KIRREL3-208ENST00000547738 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
KIRREL3-208ENST00000547738 SMARCA4P51532 1647 aa22.12■■□□□ 1.13
KIRREL3-208ENST00000547738 WIZO95785 1651 aa21.98■■□□□ 1.11
KIRREL3-208ENST00000547738 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.1
KIRREL3-208ENST00000547738 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
KIRREL3-208ENST00000547738 SMARCA2P51531 1590 aa21.79■■□□□ 1.08
KIRREL3-208ENST00000547738 TOP2AP11388 1531 aaKnown RBP21.79■■□□□ 1.08
KIRREL3-208ENST00000547738 ATAD2BQ9ULI0 1458 aa21.75■■□□□ 1.07
KIRREL3-208ENST00000547738 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.05
KIRREL3-208ENST00000547738 NCAPD3P42695 1498 aa21.61■■□□□ 1.05
KIRREL3-208ENST00000547738 HMGXB3Q12766 1538 aa21.6■■□□□ 1.05
KIRREL3-208ENST00000547738 PELP1Q8IZL8 1130 aaKnown RBP21.6■■□□□ 1.05
KIRREL3-208ENST00000547738 CC2D2AQ9P2K1 1620 aa21.54■■□□□ 1.04
KIRREL3-208ENST00000547738 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
KIRREL3-208ENST00000547738 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
KIRREL3-208ENST00000547738 MYT1Q01538 1121 aa21.17■□□□□ 0.98
KIRREL3-208ENST00000547738 CFTRP13569 1480 aa21.1■□□□□ 0.97
KIRREL3-208ENST00000547738 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
KIRREL3-208ENST00000547738 PRDM2Q13029 1718 aa21.05■□□□□ 0.96
KIRREL3-208ENST00000547738 CADPSQ9ULU8 1353 aa21.04■□□□□ 0.96
KIRREL3-208ENST00000547738 ABCC8Q09428 1581 aa21.01■□□□□ 0.95
KIRREL3-208ENST00000547738 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
KIRREL3-208ENST00000547738 WRNQ14191 1432 aaPredicted RBP eCLIP20.94■□□□□ 0.94
KIRREL3-208ENST00000547738 LAMC3Q9Y6N6 1575 aa20.92■□□□□ 0.94
KIRREL3-208ENST00000547738 SYNJ1O43426 1573 aa20.84■□□□□ 0.93
KIRREL3-208ENST00000547738 NESP48681 1621 aa20.82■□□□□ 0.92
KIRREL3-208ENST00000547738 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
KIRREL3-208ENST00000547738 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
KIRREL3-208ENST00000547738 FANCD2Q9BXW9 1451 aa20.8■□□□□ 0.92
KIRREL3-208ENST00000547738 PDS5BQ9NTI5 1447 aa20.74■□□□□ 0.91
KIRREL3-208ENST00000547738 HRCP23327 699 aa20.74■□□□□ 0.91
KIRREL3-208ENST00000547738 CUX1P39880 1505 aa20.74■□□□□ 0.91
KIRREL3-208ENST00000547738 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
KIRREL3-208ENST00000547738 EEA1Q15075 1411 aa20.65■□□□□ 0.9
KIRREL3-208ENST00000547738 KIF21AQ7Z4S6 1674 aa20.63■□□□□ 0.89
KIRREL3-208ENST00000547738 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
KIRREL3-208ENST00000547738 FAM9AQ8IZU1 332 aaPredicted RBP20.6■□□□□ 0.89
KIRREL3-208ENST00000547738 SOGA1O94964 1423 aa20.59■□□□□ 0.89
KIRREL3-208ENST00000547738 TOPBP1Q92547 1522 aa20.56■□□□□ 0.88
KIRREL3-208ENST00000547738 URB2Q14146 1524 aaKnown RBP20.52■□□□□ 0.88
KIRREL3-208ENST00000547738 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
KIRREL3-208ENST00000547738 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
KIRREL3-208ENST00000547738 LOC105371045A0A1W2PR82 267 aa20.49■□□□□ 0.87
KIRREL3-208ENST00000547738 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
KIRREL3-208ENST00000547738 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
KIRREL3-208ENST00000547738 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
KIRREL3-208ENST00000547738 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
KIRREL3-208ENST00000547738 ERCC6Q03468 1493 aa20.42■□□□□ 0.86
KIRREL3-208ENST00000547738 ABCA10Q8WWZ4 1543 aa20.38■□□□□ 0.85
KIRREL3-208ENST00000547738 WDR62O43379 1518 aa20.37■□□□□ 0.85
KIRREL3-208ENST00000547738 CUX2O14529 1486 aa20.37■□□□□ 0.85
KIRREL3-208ENST00000547738 KIF21BO75037 1637 aa20.37■□□□□ 0.85
KIRREL3-208ENST00000547738 RAD54L2Q9Y4B4 1467 aa20.34■□□□□ 0.85
KIRREL3-208ENST00000547738 WDR97A6NE52 1622 aa20.33■□□□□ 0.85
KIRREL3-208ENST00000547738 GOLGA3Q08378 1498 aa20.32■□□□□ 0.84
KIRREL3-208ENST00000547738 THOC2Q8NI27 1593 aaKnown RBP20.32■□□□□ 0.84
KIRREL3-208ENST00000547738 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.84
KIRREL3-208ENST00000547738 PRXQ9BXM0 1461 aa20.26■□□□□ 0.83
KIRREL3-208ENST00000547738 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
KIRREL3-208ENST00000547738 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
KIRREL3-208ENST00000547738 TTBK1Q5TCY1 1321 aaPredicted RBP20.24■□□□□ 0.83
KIRREL3-208ENST00000547738 IGF1RP08069 1367 aa20.23■□□□□ 0.83
KIRREL3-208ENST00000547738 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
KIRREL3-208ENST00000547738 ABCA5Q8WWZ7 1642 aa20.22■□□□□ 0.83
KIRREL3-208ENST00000547738 IFT140Q96RY7 1462 aa20.21■□□□□ 0.83
KIRREL3-208ENST00000547738 RAPGEF2Q9Y4G8 1499 aa20.2■□□□□ 0.82
KIRREL3-208ENST00000547738 UBTFP17480 764 aaKnown RBP20.18■□□□□ 0.82
KIRREL3-208ENST00000547738 GAPVD1Q14C86 1478 aa20.16■□□□□ 0.82
KIRREL3-208ENST00000547738 CUL7Q14999 1698 aa20.16■□□□□ 0.82
KIRREL3-208ENST00000547738 TDRD9Q8NDG6 1382 aaKnown RBP20.15■□□□□ 0.82
KIRREL3-208ENST00000547738 CARMIL1Q5VZK9 1371 aa20.14■□□□□ 0.81
KIRREL3-208ENST00000547738 CEP162Q5TB80 1403 aa20.09■□□□□ 0.81
KIRREL3-208ENST00000547738 PBRM1Q86U86 1689 aa20.09■□□□□ 0.81
KIRREL3-208ENST00000547738 AQRO60306 1485 aaKnown RBP eCLIP20.04■□□□□ 0.8
KIRREL3-208ENST00000547738 GRIN2BQ13224 1484 aa20.04■□□□□ 0.8
KIRREL3-208ENST00000547738 ZNF608Q9ULD9 1512 aaPredicted RBP20.04■□□□□ 0.8
KIRREL3-208ENST00000547738 EIF4G3O43432 1585 aaKnown RBP20.02■□□□□ 0.8
KIRREL3-208ENST00000547738 CLIP1P30622 1438 aa19.97■□□□□ 0.79
KIRREL3-208ENST00000547738 FHAD1B1AJZ9 1412 aa19.96■□□□□ 0.79
KIRREL3-208ENST00000547738 ADAMTS12P58397 1594 aa19.95■□□□□ 0.78
KIRREL3-208ENST00000547738 CTTNBP2Q8WZ74 1663 aa19.91■□□□□ 0.78
KIRREL3-208ENST00000547738 MAGI1Q96QZ7 1491 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms