RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 NISCHQ9Y2I1 1504 aa49.4■■■■■ 5.5
C12orf49-203ENST00000547630 CCDC180Q9P1Z9 1646 aa43.77■■■■■ 4.6
C12orf49-203ENST00000547630 ABCC9O60706 1549 aa42.66■■■■■ 4.42
C12orf49-203ENST00000547630 DCAF8L2P0C7V8 631 aa41.26■■■■■ 4.2
C12orf49-203ENST00000547630 ZCCHC6Q5VYS8 1495 aaKnown RBP41.2■■■■■ 4.19
C12orf49-203ENST00000547630 NACADO15069 1562 aa41.1■■■■■ 4.17
C12orf49-203ENST00000547630 RB1CC1Q8TDY2 1594 aa41.1■■■■■ 4.17
C12orf49-203ENST00000547630 MYO15BQ96JP2 1530 aa40.9■■■■■ 4.14
C12orf49-203ENST00000547630 DCAF1Q9Y4B6 1507 aa40.85■■■■■ 4.13
C12orf49-203ENST00000547630 UNC13AQ9UPW8 1703 aa40.18■■■■■ 4.02
C12orf49-203ENST00000547630 SCRIBQ14160 1630 aa40.02■■■■■ 4
C12orf49-203ENST00000547630 PABPN1Q86U42 306 aaKnown RBP eCLIP39.94■■■■□ 3.98
C12orf49-203ENST00000547630 BICRAQ9NZM4 1560 aa39.86■■■■□ 3.97
C12orf49-203ENST00000547630 SHROOM4Q9ULL8 1493 aa39.4■■■■□ 3.9
C12orf49-203ENST00000547630 DNAJC5BQ9UF47 199 aa38.94■■■■□ 3.82
C12orf49-203ENST00000547630 EIF4G1Q04637 1599 aaKnown RBP38.79■■■■□ 3.8
C12orf49-203ENST00000547630 CC2D2AQ9P2K1 1620 aa38.57■■■■□ 3.77
C12orf49-203ENST00000547630 CECR2Q9BXF3 1484 aa38.49■■■■□ 3.75
C12orf49-203ENST00000547630 SMARCA4P51532 1647 aa38.28■■■■□ 3.72
C12orf49-203ENST00000547630 BAZ1AQ9NRL2 1556 aaPredicted RBP38.26■■■■□ 3.72
C12orf49-203ENST00000547630 MROH2BQ7Z745 1585 aa38.1■■■■□ 3.69
C12orf49-203ENST00000547630 ATAD2BQ9ULI0 1458 aa38.01■■■■□ 3.68
C12orf49-203ENST00000547630 SMARCA2P51531 1590 aa37.96■■■■□ 3.67
C12orf49-203ENST00000547630 NCAPD3P42695 1498 aa37.93■■■■□ 3.66
C12orf49-203ENST00000547630 PEG3Q9GZU2 1588 aa37.86■■■■□ 3.65
C12orf49-203ENST00000547630 HMGXB3Q12766 1538 aa37.76■■■■□ 3.64
C12orf49-203ENST00000547630 RSF1Q96T23 1441 aaPredicted RBP37.75■■■■□ 3.63
C12orf49-203ENST00000547630 WIZO95785 1651 aa37.71■■■■□ 3.63
C12orf49-203ENST00000547630 BAZ1BQ9UIG0 1483 aaKnown RBP37.71■■■■□ 3.63
C12orf49-203ENST00000547630 TOP2AP11388 1531 aaKnown RBP37.3■■■■□ 3.56
C12orf49-203ENST00000547630 SUPT5HO00267 1087 aaKnown RBP37.06■■■■□ 3.52
C12orf49-203ENST00000547630 NESP48681 1621 aa37■■■■□ 3.51
C12orf49-203ENST00000547630 LAMC3Q9Y6N6 1575 aa36.89■■■■□ 3.5
C12orf49-203ENST00000547630 CCDC88BA6NC98 1476 aa36.88■■■■□ 3.49
C12orf49-203ENST00000547630 CADPSQ9ULU8 1353 aa36.86■■■■□ 3.49
C12orf49-203ENST00000547630 ERCC6Q03468 1493 aa36.73■■■■□ 3.47
C12orf49-203ENST00000547630 CFTRP13569 1480 aa36.69■■■■□ 3.46
C12orf49-203ENST00000547630 PDS5BQ9NTI5 1447 aa36.65■■■■□ 3.46
C12orf49-203ENST00000547630 KIF21AQ7Z4S6 1674 aa36.55■■■■□ 3.44
C12orf49-203ENST00000547630 FANCD2Q9BXW9 1451 aa36.45■■■■□ 3.42
C12orf49-203ENST00000547630 PRDM2Q13029 1718 aa36.41■■■■□ 3.42
C12orf49-203ENST00000547630 CEP164Q9UPV0 1460 aa36.37■■■■□ 3.41
C12orf49-203ENST00000547630 THOC2Q8NI27 1593 aaKnown RBP36.34■■■■□ 3.41
C12orf49-203ENST00000547630 MRC2Q9UBG0 1479 aa36.26■■■■□ 3.4
C12orf49-203ENST00000547630 CUX2O14529 1486 aa36.21■■■■□ 3.39
C12orf49-203ENST00000547630 WDR62O43379 1518 aa36.11■■■■□ 3.37
C12orf49-203ENST00000547630 URB2Q14146 1524 aaKnown RBP36.07■■■■□ 3.36
C12orf49-203ENST00000547630 TOPBP1Q92547 1522 aa35.89■■■■□ 3.34
C12orf49-203ENST00000547630 ABCC8Q09428 1581 aa35.87■■■■□ 3.33
C12orf49-203ENST00000547630 DNMBPQ6XZF7 1577 aa35.86■■■■□ 3.33
C12orf49-203ENST00000547630 CUX1P39880 1505 aa35.72■■■■□ 3.31
C12orf49-203ENST00000547630 POLA1P09884 1462 aaPredicted RBP35.6■■■■□ 3.29
C12orf49-203ENST00000547630 WRNQ14191 1432 aaPredicted RBP eCLIP35.59■■■■□ 3.29
C12orf49-203ENST00000547630 IFT140Q96RY7 1462 aa35.59■■■■□ 3.29
C12orf49-203ENST00000547630 FGD5Q6ZNL6 1462 aa35.56■■■■□ 3.28
C12orf49-203ENST00000547630 SYNJ1O43426 1573 aa35.49■■■■□ 3.27
C12orf49-203ENST00000547630 SOGA1O94964 1423 aa35.48■■■■□ 3.27
C12orf49-203ENST00000547630 RAD54L2Q9Y4B4 1467 aa35.48■■■■□ 3.27
C12orf49-203ENST00000547630 TOP2BQ02880 1626 aa35.47■■■■□ 3.27
C12orf49-203ENST00000547630 TARBP1Q13395 1621 aaKnown RBP35.47■■■■□ 3.27
C12orf49-203ENST00000547630 BIVM-ERCC5R4GMW8 1640 aa35.46■■■■□ 3.27
C12orf49-203ENST00000547630 ZNF608Q9ULD9 1512 aaPredicted RBP35.44■■■■□ 3.26
C12orf49-203ENST00000547630 EIF4G3O43432 1585 aaKnown RBP35.29■■■■□ 3.24
C12orf49-203ENST00000547630 AQRO60306 1485 aaKnown RBP eCLIP35.28■■■■□ 3.24
C12orf49-203ENST00000547630 TDRD9Q8NDG6 1382 aaKnown RBP35.26■■■■□ 3.24
C12orf49-203ENST00000547630 WDR97A6NE52 1622 aa35.24■■■■□ 3.23
C12orf49-203ENST00000547630 ABCA10Q8WWZ4 1543 aa35.21■■■■□ 3.23
C12orf49-203ENST00000547630 GAPVD1Q14C86 1478 aa35.06■■■■□ 3.2
C12orf49-203ENST00000547630 ABCA5Q8WWZ7 1642 aa35.05■■■■□ 3.2
C12orf49-203ENST00000547630 GRIN2BQ13224 1484 aa35.01■■■■□ 3.2
C12orf49-203ENST00000547630 PBRM1Q86U86 1689 aa34.97■■■■□ 3.19
C12orf49-203ENST00000547630 TRIM41Q8WV44 630 aa34.96■■■■□ 3.19
C12orf49-203ENST00000547630 SNAPC4Q5SXM2 1469 aa34.95■■■■□ 3.19
C12orf49-203ENST00000547630 MAGI1Q96QZ7 1491 aaPredicted RBP34.88■■■■□ 3.17
C12orf49-203ENST00000547630 FBLN2P98095 1184 aa34.84■■■■□ 3.17
C12orf49-203ENST00000547630 DNAJC5Q9H3Z4 198 aa34.83■■■■□ 3.17
C12orf49-203ENST00000547630 KIF27Q86VH2 1401 aa34.82■■■■□ 3.16
C12orf49-203ENST00000547630 CHD1O14646 1710 aa34.8■■■■□ 3.16
C12orf49-203ENST00000547630 OSCARQ8IYS5 282 aa34.8■■■■□ 3.16
C12orf49-203ENST00000547630 ERICH3Q5RHP9 1530 aa34.79■■■■□ 3.16
C12orf49-203ENST00000547630 CHMP7Q8WUX9 453 aaPredicted RBP34.75■■■■□ 3.15
C12orf49-203ENST00000547630 SYNJ2O15056 1496 aa34.75■■■■□ 3.15
C12orf49-203ENST00000547630 CHIC1Q5VXU3 224 aa34.72■■■■□ 3.15
C12orf49-203ENST00000547630 ADAMTS12P58397 1594 aa34.7■■■■□ 3.14
C12orf49-203ENST00000547630 IGF1RP08069 1367 aa34.66■■■■□ 3.14
C12orf49-203ENST00000547630 FHAD1B1AJZ9 1412 aa34.66■■■■□ 3.14
C12orf49-203ENST00000547630 RUSC2Q8N2Y8 1516 aa34.63■■■■□ 3.13
C12orf49-203ENST00000547630 GRIN2AQ12879 1464 aa34.56■■■■□ 3.12
C12orf49-203ENST00000547630 CUL7Q14999 1698 aa34.52■■■■□ 3.12
C12orf49-203ENST00000547630 CARMIL1Q5VZK9 1371 aa34.47■■■■□ 3.11
C12orf49-203ENST00000547630 CLASP1Q7Z460 1538 aa34.41■■■■□ 3.1
C12orf49-203ENST00000547630 CEP170Q5SW79 1584 aa34.39■■■■□ 3.1
C12orf49-203ENST00000547630 NUP160Q12769 1436 aa34.39■■■■□ 3.1
C12orf49-203ENST00000547630 EEA1Q15075 1411 aa34.3■■■■□ 3.08
C12orf49-203ENST00000547630 FAM9AQ8IZU1 332 aaPredicted RBP34.28■■■■□ 3.08
C12orf49-203ENST00000547630 RAPGEF2Q9Y4G8 1499 aa34.27■■■■□ 3.08
C12orf49-203ENST00000547630 CSRNP3Q8WYN3 585 aa34.27■■■■□ 3.08
C12orf49-203ENST00000547630 ARHGEF11O15085 1522 aa34.23■■■■□ 3.07
C12orf49-203ENST00000547630 PRXQ9BXM0 1461 aa34.21■■■■□ 3.07
C12orf49-203ENST00000547630 RIMBP3CA6NJZ7 1639 aa34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms