RNA–Protein interactions for RNA: ENST00000547587.5

PFKM-210, Transcript of phosphofructokinase, muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFKM, Length 2,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-210ENST00000547587 NISCHQ9Y2I1 1504 aa20.64■□□□□ 0.89
PFKM-210ENST00000547587 CCDC180Q9P1Z9 1646 aa18.03■□□□□ 0.48
PFKM-210ENST00000547587 ZCCHC6Q5VYS8 1495 aaKnown RBP17.33■□□□□ 0.36
PFKM-210ENST00000547587 ABCC9O60706 1549 aa17.11■□□□□ 0.33
PFKM-210ENST00000547587 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
PFKM-210ENST00000547587 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
PFKM-210ENST00000547587 MYO15BQ96JP2 1530 aa16.9■□□□□ 0.3
PFKM-210ENST00000547587 NACADO15069 1562 aa16.81■□□□□ 0.28
PFKM-210ENST00000547587 SHROOM4Q9ULL8 1493 aa16.77■□□□□ 0.28
PFKM-210ENST00000547587 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
PFKM-210ENST00000547587 SCRIBQ14160 1630 aa16.57■□□□□ 0.24
PFKM-210ENST00000547587 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.2
PFKM-210ENST00000547587 BICRAQ9NZM4 1560 aa16.18■□□□□ 0.18
PFKM-210ENST00000547587 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
PFKM-210ENST00000547587 SUPT5HO00267 1087 aaKnown RBP16.1■□□□□ 0.17
PFKM-210ENST00000547587 CECR2Q9BXF3 1484 aa16.04■□□□□ 0.16
PFKM-210ENST00000547587 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
PFKM-210ENST00000547587 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
PFKM-210ENST00000547587 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
PFKM-210ENST00000547587 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
PFKM-210ENST00000547587 WIZO95785 1651 aa15.8■□□□□ 0.12
PFKM-210ENST00000547587 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
PFKM-210ENST00000547587 PEG3Q9GZU2 1588 aa15.7■□□□□ 0.1
PFKM-210ENST00000547587 TOP2AP11388 1531 aaKnown RBP15.65■□□□□ 0.1
PFKM-210ENST00000547587 ATAD2BQ9ULI0 1458 aa15.64■□□□□ 0.09
PFKM-210ENST00000547587 SMARCA2P51531 1590 aa15.63■□□□□ 0.09
PFKM-210ENST00000547587 BAZ1BQ9UIG0 1483 aaKnown RBP15.55■□□□□ 0.08
PFKM-210ENST00000547587 NCAPD3P42695 1498 aa15.52■□□□□ 0.08
PFKM-210ENST00000547587 HMGXB3Q12766 1538 aa15.49■□□□□ 0.07
PFKM-210ENST00000547587 CC2D2AQ9P2K1 1620 aa15.48■□□□□ 0.07
PFKM-210ENST00000547587 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
PFKM-210ENST00000547587 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
PFKM-210ENST00000547587 HRCP23327 699 aa15.26■□□□□ 0.03
PFKM-210ENST00000547587 CFTRP13569 1480 aa15.15■□□□□ 0.02
PFKM-210ENST00000547587 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
PFKM-210ENST00000547587 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
PFKM-210ENST00000547587 ABCC8Q09428 1581 aa15.12■□□□□ 0.01
PFKM-210ENST00000547587 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
PFKM-210ENST00000547587 PRDM2Q13029 1718 aa15.07■□□□□ 0
PFKM-210ENST00000547587 WRNQ14191 1432 aaPredicted RBP eCLIP15.05■□□□□ -0
PFKM-210ENST00000547587 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
PFKM-210ENST00000547587 NESP48681 1621 aa15□□□□□ -0.01
PFKM-210ENST00000547587 SYNJ1O43426 1573 aa14.98□□□□□ -0.01
PFKM-210ENST00000547587 PCGF6Q9BYE7 350 aa14.95□□□□□ -0.02
PFKM-210ENST00000547587 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
PFKM-210ENST00000547587 TOP2BQ02880 1626 aa14.93□□□□□ -0.02
PFKM-210ENST00000547587 BIVM-ERCC5R4GMW8 1640 aa14.92□□□□□ -0.02
PFKM-210ENST00000547587 CUX1P39880 1505 aa14.91□□□□□ -0.02
PFKM-210ENST00000547587 PDS5BQ9NTI5 1447 aa14.88□□□□□ -0.03
PFKM-210ENST00000547587 CEP164Q9UPV0 1460 aa14.86□□□□□ -0.03
PFKM-210ENST00000547587 FAM9AQ8IZU1 332 aaPredicted RBP14.86□□□□□ -0.03
PFKM-210ENST00000547587 LOC105371045A0A1W2PR82 267 aa14.84□□□□□ -0.03
PFKM-210ENST00000547587 SOGA1O94964 1423 aa14.83□□□□□ -0.04
PFKM-210ENST00000547587 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
PFKM-210ENST00000547587 DNMBPQ6XZF7 1577 aa14.8□□□□□ -0.04
PFKM-210ENST00000547587 EEA1Q15075 1411 aa14.8□□□□□ -0.04
PFKM-210ENST00000547587 PPARGC1BQ86YN6 1023 aaKnown RBP14.8□□□□□ -0.04
PFKM-210ENST00000547587 TOPBP1Q92547 1522 aa14.78□□□□□ -0.04
PFKM-210ENST00000547587 RUSC2Q8N2Y8 1516 aa14.78□□□□□ -0.04
PFKM-210ENST00000547587 URB2Q14146 1524 aaKnown RBP14.76□□□□□ -0.05
PFKM-210ENST00000547587 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
PFKM-210ENST00000547587 CSRNP3Q8WYN3 585 aa14.71□□□□□ -0.05
PFKM-210ENST00000547587 TRIM26Q12899 539 aaPredicted RBP14.71□□□□□ -0.05
PFKM-210ENST00000547587 MRC2Q9UBG0 1479 aa14.71□□□□□ -0.06
PFKM-210ENST00000547587 POLA1P09884 1462 aaPredicted RBP14.7□□□□□ -0.06
PFKM-210ENST00000547587 ERCC6Q03468 1493 aa14.68□□□□□ -0.06
PFKM-210ENST00000547587 KIF27Q86VH2 1401 aa14.68□□□□□ -0.06
PFKM-210ENST00000547587 CUX2O14529 1486 aa14.65□□□□□ -0.06
PFKM-210ENST00000547587 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
PFKM-210ENST00000547587 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
PFKM-210ENST00000547587 ABCA10Q8WWZ4 1543 aa14.63□□□□□ -0.07
PFKM-210ENST00000547587 WDR62O43379 1518 aa14.63□□□□□ -0.07
PFKM-210ENST00000547587 KIF21BO75037 1637 aa14.61□□□□□ -0.07
PFKM-210ENST00000547587 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
PFKM-210ENST00000547587 GOLGA3Q08378 1498 aa14.59□□□□□ -0.07
PFKM-210ENST00000547587 WDR97A6NE52 1622 aa14.59□□□□□ -0.07
PFKM-210ENST00000547587 PRXQ9BXM0 1461 aa14.56□□□□□ -0.08
PFKM-210ENST00000547587 TARBP1Q13395 1621 aaKnown RBP14.56□□□□□ -0.08
PFKM-210ENST00000547587 IGF1RP08069 1367 aa14.55□□□□□ -0.08
PFKM-210ENST00000547587 RAPGEF2Q9Y4G8 1499 aa14.54□□□□□ -0.08
PFKM-210ENST00000547587 TNIKQ9UKE5 1360 aa14.53□□□□□ -0.08
PFKM-210ENST00000547587 ERICH3Q5RHP9 1530 aa14.53□□□□□ -0.08
PFKM-210ENST00000547587 ZEB1P37275 1124 aaPredicted RBP14.52□□□□□ -0.09
PFKM-210ENST00000547587 ABCA5Q8WWZ7 1642 aa14.52□□□□□ -0.09
PFKM-210ENST00000547587 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
PFKM-210ENST00000547587 IFT140Q96RY7 1462 aa14.51□□□□□ -0.09
PFKM-210ENST00000547587 TDRD9Q8NDG6 1382 aaKnown RBP14.51□□□□□ -0.09
PFKM-210ENST00000547587 GAPVD1Q14C86 1478 aa14.49□□□□□ -0.09
PFKM-210ENST00000547587 CARMIL1Q5VZK9 1371 aa14.48□□□□□ -0.09
PFKM-210ENST00000547587 CEP162Q5TB80 1403 aa14.45□□□□□ -0.1
PFKM-210ENST00000547587 CUL7Q14999 1698 aa14.44□□□□□ -0.1
PFKM-210ENST00000547587 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.11e-6■■■■■ 33.8
PFKM-210ENST00000547587 ZNF608Q9ULD9 1512 aaPredicted RBP14.43□□□□□ -0.1
PFKM-210ENST00000547587 PBRM1Q86U86 1689 aa14.4□□□□□ -0.1
PFKM-210ENST00000547587 GRIN2BQ13224 1484 aa14.39□□□□□ -0.11
PFKM-210ENST00000547587 EIF4G3O43432 1585 aaKnown RBP14.38□□□□□ -0.11
PFKM-210ENST00000547587 PELP1Q8IZL8 1130 aaKnown RBP14.37□□□□□ -0.11
PFKM-210ENST00000547587 CLIP1P30622 1438 aa14.35□□□□□ -0.11
PFKM-210ENST00000547587 FHAD1B1AJZ9 1412 aa14.34□□□□□ -0.11
PFKM-210ENST00000547587 ADAMTS12P58397 1594 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms