RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 NISCHQ9Y2I1 1504 aa49.9■■■■■ 5.58
GPN3-205ENST00000547323 CCDC180Q9P1Z9 1646 aa44.12■■■■■ 4.65
GPN3-205ENST00000547323 ABCC9O60706 1549 aa42.9■■■■■ 4.46
GPN3-205ENST00000547323 DCAF8L2P0C7V8 631 aa41.66■■■■■ 4.26
GPN3-205ENST00000547323 ZCCHC6Q5VYS8 1495 aaKnown RBP41.64■■■■■ 4.26
GPN3-205ENST00000547323 NACADO15069 1562 aa41.39■■■■■ 4.22
GPN3-205ENST00000547323 RB1CC1Q8TDY2 1594 aa41.34■■■■■ 4.21
GPN3-205ENST00000547323 DCAF1Q9Y4B6 1507 aa41.23■■■■■ 4.19
GPN3-205ENST00000547323 MYO15BQ96JP2 1530 aa41.22■■■■■ 4.19
GPN3-205ENST00000547323 UNC13AQ9UPW8 1703 aa40.52■■■■■ 4.08
GPN3-205ENST00000547323 SCRIBQ14160 1630 aa40.39■■■■■ 4.06
GPN3-205ENST00000547323 PABPN1Q86U42 306 aaKnown RBP eCLIP40.22■■■■■ 4.03
GPN3-205ENST00000547323 BICRAQ9NZM4 1560 aa40.16■■■■■ 4.02
GPN3-205ENST00000547323 SHROOM4Q9ULL8 1493 aa39.81■■■■□ 3.96
GPN3-205ENST00000547323 DNAJC5BQ9UF47 199 aa39.09■■■■□ 3.85
GPN3-205ENST00000547323 EIF4G1Q04637 1599 aaKnown RBP39.02■■■■□ 3.84
GPN3-205ENST00000547323 CECR2Q9BXF3 1484 aa38.92■■■■□ 3.82
GPN3-205ENST00000547323 CC2D2AQ9P2K1 1620 aa38.79■■■■□ 3.8
GPN3-205ENST00000547323 SMARCA4P51532 1647 aa38.63■■■■□ 3.78
GPN3-205ENST00000547323 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
GPN3-205ENST00000547323 MROH2BQ7Z745 1585 aa38.53■■■■□ 3.76
GPN3-205ENST00000547323 ATAD2BQ9ULI0 1458 aa38.33■■■■□ 3.73
GPN3-205ENST00000547323 SMARCA2P51531 1590 aa38.25■■■■□ 3.71
GPN3-205ENST00000547323 NCAPD3P42695 1498 aa38.22■■■■□ 3.71
GPN3-205ENST00000547323 RSF1Q96T23 1441 aaPredicted RBP38.21■■■■□ 3.71
GPN3-205ENST00000547323 PEG3Q9GZU2 1588 aa38.2■■■■□ 3.71
GPN3-205ENST00000547323 WIZO95785 1651 aa38.15■■■■□ 3.7
GPN3-205ENST00000547323 HMGXB3Q12766 1538 aa38.02■■■■□ 3.68
GPN3-205ENST00000547323 BAZ1BQ9UIG0 1483 aaKnown RBP38.02■■■■□ 3.68
GPN3-205ENST00000547323 TOP2AP11388 1531 aaKnown RBP37.68■■■■□ 3.62
GPN3-205ENST00000547323 SUPT5HO00267 1087 aaKnown RBP37.66■■■■□ 3.62
GPN3-205ENST00000547323 CCDC88BA6NC98 1476 aa37.31■■■■□ 3.56
GPN3-205ENST00000547323 NESP48681 1621 aa37.27■■■■□ 3.56
GPN3-205ENST00000547323 CADPSQ9ULU8 1353 aa37.14■■■■□ 3.54
GPN3-205ENST00000547323 LAMC3Q9Y6N6 1575 aa37.11■■■■□ 3.53
GPN3-205ENST00000547323 CFTRP13569 1480 aa37■■■■□ 3.51
GPN3-205ENST00000547323 ERCC6Q03468 1493 aa36.88■■■■□ 3.49
GPN3-205ENST00000547323 PDS5BQ9NTI5 1447 aa36.85■■■■□ 3.49
GPN3-205ENST00000547323 KIF21AQ7Z4S6 1674 aa36.81■■■■□ 3.48
GPN3-205ENST00000547323 PRDM2Q13029 1718 aa36.75■■■■□ 3.47
GPN3-205ENST00000547323 FANCD2Q9BXW9 1451 aa36.72■■■■□ 3.47
GPN3-205ENST00000547323 CEP164Q9UPV0 1460 aa36.61■■■■□ 3.45
GPN3-205ENST00000547323 THOC2Q8NI27 1593 aaKnown RBP36.53■■■■□ 3.44
GPN3-205ENST00000547323 MRC2Q9UBG0 1479 aa36.47■■■■□ 3.43
GPN3-205ENST00000547323 URB2Q14146 1524 aaKnown RBP36.36■■■■□ 3.41
GPN3-205ENST00000547323 WDR62O43379 1518 aa36.33■■■■□ 3.41
GPN3-205ENST00000547323 CUX2O14529 1486 aa36.28■■■■□ 3.4
GPN3-205ENST00000547323 TOPBP1Q92547 1522 aa36.19■■■■□ 3.38
GPN3-205ENST00000547323 DNMBPQ6XZF7 1577 aa36.15■■■■□ 3.38
GPN3-205ENST00000547323 ABCC8Q09428 1581 aa36.13■■■■□ 3.37
GPN3-205ENST00000547323 CUX1P39880 1505 aa36.1■■■■□ 3.37
GPN3-205ENST00000547323 WRNQ14191 1432 aaPredicted RBP eCLIP35.99■■■■□ 3.35
GPN3-205ENST00000547323 SYNJ1O43426 1573 aa35.92■■■■□ 3.34
GPN3-205ENST00000547323 POLA1P09884 1462 aaPredicted RBP35.91■■■■□ 3.34
GPN3-205ENST00000547323 FGD5Q6ZNL6 1462 aa35.9■■■■□ 3.34
GPN3-205ENST00000547323 TOP2BQ02880 1626 aa35.86■■■■□ 3.33
GPN3-205ENST00000547323 BIVM-ERCC5R4GMW8 1640 aa35.85■■■■□ 3.33
GPN3-205ENST00000547323 IFT140Q96RY7 1462 aa35.81■■■■□ 3.32
GPN3-205ENST00000547323 RAD54L2Q9Y4B4 1467 aa35.81■■■■□ 3.32
GPN3-205ENST00000547323 SOGA1O94964 1423 aa35.79■■■■□ 3.32
GPN3-205ENST00000547323 TARBP1Q13395 1621 aaKnown RBP35.77■■■■□ 3.32
GPN3-205ENST00000547323 ZNF608Q9ULD9 1512 aaPredicted RBP35.71■■■■□ 3.31
GPN3-205ENST00000547323 AQRO60306 1485 aaKnown RBP eCLIP35.57■■■■□ 3.28
GPN3-205ENST00000547323 TDRD9Q8NDG6 1382 aaKnown RBP35.57■■■■□ 3.28
GPN3-205ENST00000547323 WDR97A6NE52 1622 aa35.56■■■■□ 3.28
GPN3-205ENST00000547323 ABCA10Q8WWZ4 1543 aa35.53■■■■□ 3.28
GPN3-205ENST00000547323 EIF4G3O43432 1585 aaKnown RBP35.52■■■■□ 3.28
GPN3-205ENST00000547323 TRIM41Q8WV44 630 aa35.49■■■■□ 3.27
GPN3-205ENST00000547323 CHIC1Q5VXU3 224 aa35.38■■■■□ 3.25
GPN3-205ENST00000547323 GAPVD1Q14C86 1478 aa35.36■■■■□ 3.25
GPN3-205ENST00000547323 ABCA5Q8WWZ7 1642 aa35.36■■■■□ 3.25
GPN3-205ENST00000547323 GRIN2BQ13224 1484 aa35.28■■■■□ 3.24
GPN3-205ENST00000547323 PBRM1Q86U86 1689 aa35.27■■■■□ 3.24
GPN3-205ENST00000547323 SNAPC4Q5SXM2 1469 aa35.2■■■■□ 3.23
GPN3-205ENST00000547323 KIF27Q86VH2 1401 aa35.19■■■■□ 3.22
GPN3-205ENST00000547323 RUSC2Q8N2Y8 1516 aa35.14■■■■□ 3.22
GPN3-205ENST00000547323 DNAJC5Q9H3Z4 198 aa35.13■■■■□ 3.21
GPN3-205ENST00000547323 MAGI1Q96QZ7 1491 aaPredicted RBP35.1■■■■□ 3.21
GPN3-205ENST00000547323 ERICH3Q5RHP9 1530 aa35.09■■■■□ 3.21
GPN3-205ENST00000547323 FBLN2P98095 1184 aa35.08■■■■□ 3.21
GPN3-205ENST00000547323 IGF1RP08069 1367 aa35.06■■■■□ 3.2
GPN3-205ENST00000547323 CHD1O14646 1710 aa35.04■■■■□ 3.2
GPN3-205ENST00000547323 CHMP7Q8WUX9 453 aaPredicted RBP35■■■■□ 3.19
GPN3-205ENST00000547323 SYNJ2O15056 1496 aa34.99■■■■□ 3.19
GPN3-205ENST00000547323 ADAMTS12P58397 1594 aa34.99■■■■□ 3.19
GPN3-205ENST00000547323 OSCARQ8IYS5 282 aa34.94■■■■□ 3.18
GPN3-205ENST00000547323 FHAD1B1AJZ9 1412 aa34.94■■■■□ 3.18
GPN3-205ENST00000547323 CUL7Q14999 1698 aa34.85■■■■□ 3.17
GPN3-205ENST00000547323 FAM9AQ8IZU1 332 aaPredicted RBP34.84■■■■□ 3.17
GPN3-205ENST00000547323 CARMIL1Q5VZK9 1371 aa34.84■■■■□ 3.17
GPN3-205ENST00000547323 GRIN2AQ12879 1464 aa34.84■■■■□ 3.17
GPN3-205ENST00000547323 CSRNP3Q8WYN3 585 aa34.75■■■■□ 3.15
GPN3-205ENST00000547323 EEA1Q15075 1411 aa34.73■■■■□ 3.15
GPN3-205ENST00000547323 CEP170Q5SW79 1584 aa34.68■■■■□ 3.14
GPN3-205ENST00000547323 NUP160Q12769 1436 aa34.65■■■■□ 3.14
GPN3-205ENST00000547323 RAPGEF2Q9Y4G8 1499 aa34.65■■■■□ 3.14
GPN3-205ENST00000547323 PRXQ9BXM0 1461 aa34.64■■■■□ 3.14
GPN3-205ENST00000547323 CLASP1Q7Z460 1538 aa34.62■■■■□ 3.13
GPN3-205ENST00000547323 KIAA0586Q9BVV6 1533 aa34.43■■■■□ 3.1
GPN3-205ENST00000547323 EHMT2Q96KQ7 1210 aa34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms