RNA–Protein interactions for RNA: ENST00000547190.5

GPD1-202, Transcript of glycerol-3-phosphate dehydrogenase 1, humanhuman

TSL 5

Gene GPD1, Length 740 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1-202ENST00000547190 NISCHQ9Y2I1 1504 aa30.46■■■□□ 2.47
GPD1-202ENST00000547190 CCDC180Q9P1Z9 1646 aa26.88■■□□□ 1.89
GPD1-202ENST00000547190 ABCC9O60706 1549 aa26.19■■□□□ 1.78
GPD1-202ENST00000547190 DCAF8L2P0C7V8 631 aa25.5■■□□□ 1.67
GPD1-202ENST00000547190 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
GPD1-202ENST00000547190 NACADO15069 1562 aa25.23■■□□□ 1.63
GPD1-202ENST00000547190 RB1CC1Q8TDY2 1594 aa25.21■■□□□ 1.63
GPD1-202ENST00000547190 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
GPD1-202ENST00000547190 MYO15BQ96JP2 1530 aa25.11■■□□□ 1.61
GPD1-202ENST00000547190 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
GPD1-202ENST00000547190 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
GPD1-202ENST00000547190 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
GPD1-202ENST00000547190 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
GPD1-202ENST00000547190 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
GPD1-202ENST00000547190 DNAJC5BQ9UF47 199 aa23.89■■□□□ 1.41
GPD1-202ENST00000547190 EIF4G1Q04637 1599 aaKnown RBP23.8■■□□□ 1.4
GPD1-202ENST00000547190 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
GPD1-202ENST00000547190 CC2D2AQ9P2K1 1620 aa23.66■■□□□ 1.38
GPD1-202ENST00000547190 SMARCA4P51532 1647 aa23.58■■□□□ 1.36
GPD1-202ENST00000547190 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
GPD1-202ENST00000547190 MROH2BQ7Z745 1585 aa23.53■■□□□ 1.36
GPD1-202ENST00000547190 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.34
GPD1-202ENST00000547190 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
GPD1-202ENST00000547190 SMARCA2P51531 1590 aa23.32■■□□□ 1.32
GPD1-202ENST00000547190 WIZO95785 1651 aa23.31■■□□□ 1.32
GPD1-202ENST00000547190 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
GPD1-202ENST00000547190 PEG3Q9GZU2 1588 aa23.27■■□□□ 1.32
GPD1-202ENST00000547190 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
GPD1-202ENST00000547190 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
GPD1-202ENST00000547190 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
GPD1-202ENST00000547190 TOP2AP11388 1531 aaKnown RBP22.99■■□□□ 1.27
GPD1-202ENST00000547190 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
GPD1-202ENST00000547190 NESP48681 1621 aa22.78■■□□□ 1.24
GPD1-202ENST00000547190 CADPSQ9ULU8 1353 aa22.66■■□□□ 1.22
GPD1-202ENST00000547190 LAMC3Q9Y6N6 1575 aa22.62■■□□□ 1.21
GPD1-202ENST00000547190 CFTRP13569 1480 aa22.57■■□□□ 1.2
GPD1-202ENST00000547190 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
GPD1-202ENST00000547190 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
GPD1-202ENST00000547190 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
GPD1-202ENST00000547190 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
GPD1-202ENST00000547190 PRDM2Q13029 1718 aa22.4■■□□□ 1.18
GPD1-202ENST00000547190 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
GPD1-202ENST00000547190 THOC2Q8NI27 1593 aaKnown RBP22.27■■□□□ 1.16
GPD1-202ENST00000547190 MRC2Q9UBG0 1479 aa22.25■■□□□ 1.15
GPD1-202ENST00000547190 URB2Q14146 1524 aaKnown RBP22.2■■□□□ 1.14
GPD1-202ENST00000547190 WDR62O43379 1518 aa22.15■■□□□ 1.14
GPD1-202ENST00000547190 CUX2O14529 1486 aa22.1■■□□□ 1.13
GPD1-202ENST00000547190 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
GPD1-202ENST00000547190 ABCC8Q09428 1581 aa22.07■■□□□ 1.12
GPD1-202ENST00000547190 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
GPD1-202ENST00000547190 CUX1P39880 1505 aa22.05■■□□□ 1.12
GPD1-202ENST00000547190 WRNQ14191 1432 aaPredicted RBP eCLIP21.98■■□□□ 1.11
GPD1-202ENST00000547190 SYNJ1O43426 1573 aa21.95■■□□□ 1.1
GPD1-202ENST00000547190 FGD5Q6ZNL6 1462 aa21.92■■□□□ 1.1
GPD1-202ENST00000547190 POLA1P09884 1462 aaPredicted RBP21.91■■□□□ 1.1
GPD1-202ENST00000547190 RAD54L2Q9Y4B4 1467 aa21.89■■□□□ 1.09
GPD1-202ENST00000547190 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
GPD1-202ENST00000547190 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
GPD1-202ENST00000547190 SOGA1O94964 1423 aa21.86■■□□□ 1.09
GPD1-202ENST00000547190 IFT140Q96RY7 1462 aa21.85■■□□□ 1.09
GPD1-202ENST00000547190 TARBP1Q13395 1621 aaKnown RBP21.82■■□□□ 1.08
GPD1-202ENST00000547190 ZNF608Q9ULD9 1512 aaPredicted RBP21.81■■□□□ 1.08
GPD1-202ENST00000547190 TDRD9Q8NDG6 1382 aaKnown RBP21.74■■□□□ 1.07
GPD1-202ENST00000547190 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.07
GPD1-202ENST00000547190 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
GPD1-202ENST00000547190 WDR97A6NE52 1622 aa21.69■■□□□ 1.06
GPD1-202ENST00000547190 ABCA10Q8WWZ4 1543 aa21.68■■□□□ 1.06
GPD1-202ENST00000547190 EIF4G3O43432 1585 aaKnown RBP21.67■■□□□ 1.06
GPD1-202ENST00000547190 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
GPD1-202ENST00000547190 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.05
GPD1-202ENST00000547190 ABCA5Q8WWZ7 1642 aa21.57■■□□□ 1.04
GPD1-202ENST00000547190 GRIN2BQ13224 1484 aa21.52■■□□□ 1.04
GPD1-202ENST00000547190 PBRM1Q86U86 1689 aa21.52■■□□□ 1.04
GPD1-202ENST00000547190 SNAPC4Q5SXM2 1469 aa21.5■■□□□ 1.03
GPD1-202ENST00000547190 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
GPD1-202ENST00000547190 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
GPD1-202ENST00000547190 FBLN2P98095 1184 aa21.45■■□□□ 1.02
GPD1-202ENST00000547190 MAGI1Q96QZ7 1491 aaPredicted RBP21.41■■□□□ 1.02
GPD1-202ENST00000547190 IGF1RP08069 1367 aa21.41■■□□□ 1.02
GPD1-202ENST00000547190 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
GPD1-202ENST00000547190 CHD1O14646 1710 aa21.39■■□□□ 1.01
GPD1-202ENST00000547190 CHMP7Q8WUX9 453 aaPredicted RBP21.39■■□□□ 1.01
GPD1-202ENST00000547190 FAM9AQ8IZU1 332 aaPredicted RBP21.36■■□□□ 1.01
GPD1-202ENST00000547190 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
GPD1-202ENST00000547190 SYNJ2O15056 1496 aa21.34■■□□□ 1.01
GPD1-202ENST00000547190 FHAD1B1AJZ9 1412 aa21.33■■□□□ 1.01
GPD1-202ENST00000547190 OSCARQ8IYS5 282 aa21.33■■□□□ 1.01
GPD1-202ENST00000547190 CARMIL1Q5VZK9 1371 aa21.29■■□□□ 1
GPD1-202ENST00000547190 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
GPD1-202ENST00000547190 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
GPD1-202ENST00000547190 CUL7Q14999 1698 aa21.25■□□□□ 0.99
GPD1-202ENST00000547190 DNAJC5Q9H3Z4 198 aa21.21■□□□□ 0.99
GPD1-202ENST00000547190 EEA1Q15075 1411 aa21.21■□□□□ 0.99
GPD1-202ENST00000547190 CEP170Q5SW79 1584 aa21.17■□□□□ 0.98
GPD1-202ENST00000547190 RAPGEF2Q9Y4G8 1499 aa21.15■□□□□ 0.98
GPD1-202ENST00000547190 PRXQ9BXM0 1461 aa21.14■□□□□ 0.98
GPD1-202ENST00000547190 NUP160Q12769 1436 aa21.14■□□□□ 0.98
GPD1-202ENST00000547190 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
GPD1-202ENST00000547190 CLASP1Q7Z460 1538 aa21.11■□□□□ 0.97
GPD1-202ENST00000547190 KIAA0586Q9BVV6 1533 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms