RNA–Protein interactions for RNA: ENST00000547134.5

CPM-205, Transcript of carboxypeptidase M, humanhuman

TSL 4

Gene CPM, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-205ENST00000547134 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
CPM-205ENST00000547134 CCDC180Q9P1Z9 1646 aa19.63■□□□□ 0.73
CPM-205ENST00000547134 ABCC9O60706 1549 aa19.08■□□□□ 0.64
CPM-205ENST00000547134 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
CPM-205ENST00000547134 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
CPM-205ENST00000547134 NACADO15069 1562 aa18.5■□□□□ 0.55
CPM-205ENST00000547134 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
CPM-205ENST00000547134 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
CPM-205ENST00000547134 RB1CC1Q8TDY2 1594 aa18.44■□□□□ 0.54
CPM-205ENST00000547134 UNC13AQ9UPW8 1703 aa17.94■□□□□ 0.46
CPM-205ENST00000547134 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
CPM-205ENST00000547134 BICRAQ9NZM4 1560 aa17.89■□□□□ 0.45
CPM-205ENST00000547134 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
CPM-205ENST00000547134 SHROOM4Q9ULL8 1493 aa17.78■□□□□ 0.44
CPM-205ENST00000547134 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
CPM-205ENST00000547134 EIF4G1Q04637 1599 aaKnown RBP17.39■□□□□ 0.37
CPM-205ENST00000547134 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
CPM-205ENST00000547134 CC2D2AQ9P2K1 1620 aa17.27■□□□□ 0.36
CPM-205ENST00000547134 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
CPM-205ENST00000547134 SMARCA4P51532 1647 aa17.16■□□□□ 0.34
CPM-205ENST00000547134 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
CPM-205ENST00000547134 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
CPM-205ENST00000547134 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
CPM-205ENST00000547134 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
CPM-205ENST00000547134 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
CPM-205ENST00000547134 RSF1Q96T23 1441 aaPredicted RBP17.02■□□□□ 0.31
CPM-205ENST00000547134 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
CPM-205ENST00000547134 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
CPM-205ENST00000547134 WIZO95785 1651 aa16.88■□□□□ 0.29
CPM-205ENST00000547134 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
CPM-205ENST00000547134 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
CPM-205ENST00000547134 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
CPM-205ENST00000547134 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
CPM-205ENST00000547134 NESP48681 1621 aa16.56■□□□□ 0.24
CPM-205ENST00000547134 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
CPM-205ENST00000547134 AEBP2Q6ZN18 517 aaPredicted RBP16.56■□□□□ 0.24
CPM-205ENST00000547134 CFTRP13569 1480 aa16.54■□□□□ 0.24
CPM-205ENST00000547134 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
CPM-205ENST00000547134 ERCC6Q03468 1493 aa16.44■□□□□ 0.22
CPM-205ENST00000547134 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
CPM-205ENST00000547134 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
CPM-205ENST00000547134 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
CPM-205ENST00000547134 CHIC1Q5VXU3 224 aa16.27■□□□□ 0.2
CPM-205ENST00000547134 CUX2O14529 1486 aa16.27■□□□□ 0.19
CPM-205ENST00000547134 MRC2Q9UBG0 1479 aa16.27■□□□□ 0.19
CPM-205ENST00000547134 PRDM2Q13029 1718 aa16.26■□□□□ 0.19
CPM-205ENST00000547134 THOC2Q8NI27 1593 aaKnown RBP16.25■□□□□ 0.19
CPM-205ENST00000547134 WDR62O43379 1518 aa16.21■□□□□ 0.19
CPM-205ENST00000547134 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
CPM-205ENST00000547134 ABCC8Q09428 1581 aa16.18■□□□□ 0.18
CPM-205ENST00000547134 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
CPM-205ENST00000547134 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
CPM-205ENST00000547134 CUX1P39880 1505 aa16.03■□□□□ 0.16
CPM-205ENST00000547134 IFT140Q96RY7 1462 aa16.01■□□□□ 0.15
CPM-205ENST00000547134 WRNQ14191 1432 aaPredicted RBP eCLIP16.01■□□□□ 0.15
CPM-205ENST00000547134 POLA1P09884 1462 aaPredicted RBP15.99■□□□□ 0.15
CPM-205ENST00000547134 SOGA1O94964 1423 aa15.96■□□□□ 0.15
CPM-205ENST00000547134 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
CPM-205ENST00000547134 TOP2BQ02880 1626 aa15.93■□□□□ 0.14
CPM-205ENST00000547134 TARBP1Q13395 1621 aaKnown RBP15.91■□□□□ 0.14
CPM-205ENST00000547134 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
CPM-205ENST00000547134 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
CPM-205ENST00000547134 SYNJ1O43426 1573 aa15.89■□□□□ 0.13
CPM-205ENST00000547134 ZNF608Q9ULD9 1512 aaPredicted RBP15.89■□□□□ 0.13
CPM-205ENST00000547134 TDRD9Q8NDG6 1382 aaKnown RBP15.85■□□□□ 0.13
CPM-205ENST00000547134 ABCA10Q8WWZ4 1543 aa15.84■□□□□ 0.13
CPM-205ENST00000547134 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.13
CPM-205ENST00000547134 WDR97A6NE52 1622 aa15.82■□□□□ 0.12
CPM-205ENST00000547134 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
CPM-205ENST00000547134 GAPVD1Q14C86 1478 aa15.76■□□□□ 0.11
CPM-205ENST00000547134 TRIM41Q8WV44 630 aa15.75■□□□□ 0.11
CPM-205ENST00000547134 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
CPM-205ENST00000547134 ABCA5Q8WWZ7 1642 aa15.7■□□□□ 0.1
CPM-205ENST00000547134 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
CPM-205ENST00000547134 DNAJC5Q9H3Z4 198 aa15.7■□□□□ 0.1
CPM-205ENST00000547134 KIF27Q86VH2 1401 aa15.68■□□□□ 0.1
CPM-205ENST00000547134 MAGI1Q96QZ7 1491 aaPredicted RBP15.68■□□□□ 0.1
CPM-205ENST00000547134 IGF1RP08069 1367 aa15.65■□□□□ 0.1
CPM-205ENST00000547134 ERICH3Q5RHP9 1530 aa15.65■□□□□ 0.1
CPM-205ENST00000547134 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
CPM-205ENST00000547134 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
CPM-205ENST00000547134 SYNJ2O15056 1496 aa15.62■□□□□ 0.09
CPM-205ENST00000547134 FBLN2P98095 1184 aa15.61■□□□□ 0.09
CPM-205ENST00000547134 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
CPM-205ENST00000547134 PBRM1Q86U86 1689 aa15.59■□□□□ 0.09
CPM-205ENST00000547134 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
CPM-205ENST00000547134 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
CPM-205ENST00000547134 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
CPM-205ENST00000547134 GRIN2AQ12879 1464 aa15.52■□□□□ 0.07
CPM-205ENST00000547134 CHD1O14646 1710 aa15.51■□□□□ 0.07
CPM-205ENST00000547134 NUP160Q12769 1436 aa15.49■□□□□ 0.07
CPM-205ENST00000547134 EEA1Q15075 1411 aa15.49■□□□□ 0.07
CPM-205ENST00000547134 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
CPM-205ENST00000547134 CUL7Q14999 1698 aa15.48■□□□□ 0.07
CPM-205ENST00000547134 CLASP1Q7Z460 1538 aa15.43■□□□□ 0.06
CPM-205ENST00000547134 PRXQ9BXM0 1461 aa15.43■□□□□ 0.06
CPM-205ENST00000547134 RAPGEF2Q9Y4G8 1499 aa15.42■□□□□ 0.06
CPM-205ENST00000547134 CEP170Q5SW79 1584 aa15.4■□□□□ 0.06
CPM-205ENST00000547134 KIAA0586Q9BVV6 1533 aa15.38■□□□□ 0.05
CPM-205ENST00000547134 JPH4Q96JJ6 628 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms