RNA–Protein interactions for RNA: ENST00000547085.1

HECTD4-203, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 5

Gene HECTD4, Length 1,868 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-203ENST00000547085 NISCHQ9Y2I1 1504 aa44.48■■■■■ 4.71
HECTD4-203ENST00000547085 CCDC180Q9P1Z9 1646 aa38.36■■■■□ 3.73
HECTD4-203ENST00000547085 ZCCHC6Q5VYS8 1495 aaKnown RBP37.6■■■■□ 3.61
HECTD4-203ENST00000547085 SHROOM4Q9ULL8 1493 aa36.95■■■■□ 3.51
HECTD4-203ENST00000547085 DCAF1Q9Y4B6 1507 aa36.81■■■■□ 3.48
HECTD4-203ENST00000547085 DCAF8L2P0C7V8 631 aa36.33■■■■□ 3.41
HECTD4-203ENST00000547085 SUPT5HO00267 1087 aaKnown RBP36.03■■■■□ 3.36
HECTD4-203ENST00000547085 MYO15BQ96JP2 1530 aa36■■■■□ 3.35
HECTD4-203ENST00000547085 NACADO15069 1562 aa35.47■■■■□ 3.27
HECTD4-203ENST00000547085 ABCC9O60706 1549 aa35.41■■■■□ 3.26
HECTD4-203ENST00000547085 SCRIBQ14160 1630 aa35.4■■■■□ 3.26
HECTD4-203ENST00000547085 CHIC1Q5VXU3 224 aa35.04■■■■□ 3.2
HECTD4-203ENST00000547085 RB1CC1Q8TDY2 1594 aa34.93■■■■□ 3.18
HECTD4-203ENST00000547085 RSF1Q96T23 1441 aaPredicted RBP34.88■■■■□ 3.17
HECTD4-203ENST00000547085 CECR2Q9BXF3 1484 aa34.46■■■■□ 3.11
HECTD4-203ENST00000547085 MROH2BQ7Z745 1585 aa34.4■■■■□ 3.1
HECTD4-203ENST00000547085 UNC13AQ9UPW8 1703 aa34.3■■■■□ 3.08
HECTD4-203ENST00000547085 BAZ1AQ9NRL2 1556 aaPredicted RBP34.29■■■■□ 3.08
HECTD4-203ENST00000547085 WIZO95785 1651 aa34.19■■■■□ 3.06
HECTD4-203ENST00000547085 SMARCA4P51532 1647 aa34.01■■■■□ 3.03
HECTD4-203ENST00000547085 TOP2AP11388 1531 aaKnown RBP33.87■■■■□ 3.01
HECTD4-203ENST00000547085 BICRAQ9NZM4 1560 aa33.86■■■■□ 3.01
HECTD4-203ENST00000547085 TRIM41Q8WV44 630 aa33.82■■■■□ 3.01
HECTD4-203ENST00000547085 EIF4G1Q04637 1599 aaKnown RBP33.75■■■□□ 2.99
HECTD4-203ENST00000547085 LOC105371045A0A1W2PR82 267 aa33.7■■■□□ 2.99
HECTD4-203ENST00000547085 SMARCA2P51531 1590 aa33.58■■■□□ 2.97
HECTD4-203ENST00000547085 PEG3Q9GZU2 1588 aa33.56■■■□□ 2.96
HECTD4-203ENST00000547085 CCDC88BA6NC98 1476 aa33.51■■■□□ 2.95
HECTD4-203ENST00000547085 PABPN1Q86U42 306 aaKnown RBP eCLIP33.47■■■□□ 2.95
HECTD4-203ENST00000547085 PCGF6Q9BYE7 350 aa33.25■■■□□ 2.91
HECTD4-203ENST00000547085 FAM9AQ8IZU1 332 aaPredicted RBP33.2■■■□□ 2.91
HECTD4-203ENST00000547085 ATAD2BQ9ULI0 1458 aa33.18■■■□□ 2.9
HECTD4-203ENST00000547085 ABCC8Q09428 1581 aa33.14■■■□□ 2.9
HECTD4-203ENST00000547085 HRCP23327 699 aa33.14■■■□□ 2.9
HECTD4-203ENST00000547085 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
HECTD4-203ENST00000547085 TRIM26Q12899 539 aaPredicted RBP33.02■■■□□ 2.88
HECTD4-203ENST00000547085 EEA1Q15075 1411 aa32.9■■■□□ 2.86
HECTD4-203ENST00000547085 WRNQ14191 1432 aaPredicted RBP eCLIP32.82■■■□□ 2.84
HECTD4-203ENST00000547085 HMGXB3Q12766 1538 aa32.79■■■□□ 2.84
HECTD4-203ENST00000547085 NCAPD3P42695 1498 aa32.71■■■□□ 2.83
HECTD4-203ENST00000547085 SOGA1O94964 1423 aa32.71■■■□□ 2.83
HECTD4-203ENST00000547085 EHMT2Q96KQ7 1210 aa32.68■■■□□ 2.82
HECTD4-203ENST00000547085 SYNJ1O43426 1573 aa32.65■■■□□ 2.82
HECTD4-203ENST00000547085 TNIKQ9UKE5 1360 aa32.56■■■□□ 2.8
HECTD4-203ENST00000547085 CSRNP3Q8WYN3 585 aa32.55■■■□□ 2.8
HECTD4-203ENST00000547085 RUSC2Q8N2Y8 1516 aa32.51■■■□□ 2.8
HECTD4-203ENST00000547085 GOLGA3Q08378 1498 aa32.49■■■□□ 2.79
HECTD4-203ENST00000547085 CEP162Q5TB80 1403 aa32.47■■■□□ 2.79
HECTD4-203ENST00000547085 TOP2BQ02880 1626 aa32.46■■■□□ 2.79
HECTD4-203ENST00000547085 KIF21BO75037 1637 aa32.43■■■□□ 2.78
HECTD4-203ENST00000547085 BIVM-ERCC5R4GMW8 1640 aa32.42■■■□□ 2.78
HECTD4-203ENST00000547085 CEP164Q9UPV0 1460 aa32.39■■■□□ 2.78
HECTD4-203ENST00000547085 CFTRP13569 1480 aa32.28■■■□□ 2.76
HECTD4-203ENST00000547085 ZEB1P37275 1124 aaPredicted RBP32.26■■■□□ 2.75
HECTD4-203ENST00000547085 PRDM2Q13029 1718 aa32.24■■■□□ 2.75
HECTD4-203ENST00000547085 UBTFP17480 764 aaKnown RBP32.22■■■□□ 2.75
HECTD4-203ENST00000547085 PPARGC1BQ86YN6 1023 aaKnown RBP32.15■■■□□ 2.74
HECTD4-203ENST00000547085 CUX1P39880 1505 aa32.11■■■□□ 2.73
HECTD4-203ENST00000547085 ERICH3Q5RHP9 1530 aa32.03■■■□□ 2.72
HECTD4-203ENST00000547085 CC2D2AQ9P2K1 1620 aa32.02■■■□□ 2.72
HECTD4-203ENST00000547085 RAPGEF2Q9Y4G8 1499 aa32.02■■■□□ 2.72
HECTD4-203ENST00000547085 CLIP1P30622 1438 aa31.98■■■□□ 2.71
HECTD4-203ENST00000547085 PRXQ9BXM0 1461 aa31.94■■■□□ 2.7
HECTD4-203ENST00000547085 CADPSQ9ULU8 1353 aa31.94■■■□□ 2.7
HECTD4-203ENST00000547085 KIF27Q86VH2 1401 aa31.89■■■□□ 2.7
HECTD4-203ENST00000547085 VPS8Q8N3P4 1428 aa31.86■■■□□ 2.69
HECTD4-203ENST00000547085 FANCD2Q9BXW9 1451 aa31.61■■■□□ 2.65
HECTD4-203ENST00000547085 FGD5Q6ZNL6 1462 aa31.6■■■□□ 2.65
HECTD4-203ENST00000547085 CUX2O14529 1486 aa31.58■■■□□ 2.65
HECTD4-203ENST00000547085 TTBK1Q5TCY1 1321 aaPredicted RBP31.58■■■□□ 2.65
HECTD4-203ENST00000547085 ARAP1Q96P48 1450 aa31.55■■■□□ 2.64
HECTD4-203ENST00000547085 CCER1Q8TC90 406 aaPredicted RBP31.54■■■□□ 2.64
HECTD4-203ENST00000547085 APLP2Q06481 763 aa31.53■■■□□ 2.64
HECTD4-203ENST00000547085 DNMBPQ6XZF7 1577 aa31.53■■■□□ 2.64
HECTD4-203ENST00000547085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.52■■■□□ 2.64
HECTD4-203ENST00000547085 IGF1RP08069 1367 aa31.48■■■□□ 2.63
HECTD4-203ENST00000547085 LAMC3Q9Y6N6 1575 aa31.46■■■□□ 2.63
HECTD4-203ENST00000547085 TOPBP1Q92547 1522 aa31.38■■■□□ 2.61
HECTD4-203ENST00000547085 RANGAP1P46060 587 aaPredicted RBP31.36■■■□□ 2.61
HECTD4-203ENST00000547085 ABCA10Q8WWZ4 1543 aa31.36■■■□□ 2.61
HECTD4-203ENST00000547085 ARHGAP35Q9NRY4 1499 aa31.35■■■□□ 2.61
HECTD4-203ENST00000547085 CARMIL1Q5VZK9 1371 aa31.35■■■□□ 2.61
HECTD4-203ENST00000547085 NESP48681 1621 aa31.33■■■□□ 2.61
HECTD4-203ENST00000547085 POLA1P09884 1462 aaPredicted RBP31.31■■■□□ 2.6
HECTD4-203ENST00000547085 CUL7Q14999 1698 aa31.23■■■□□ 2.59
HECTD4-203ENST00000547085 WDR97A6NE52 1622 aa31.2■■■□□ 2.59
HECTD4-203ENST00000547085 RAD54L2Q9Y4B4 1467 aa31.19■■■□□ 2.58
HECTD4-203ENST00000547085 PDS5BQ9NTI5 1447 aa31.16■■■□□ 2.58
HECTD4-203ENST00000547085 MAP3K1Q13233 1512 aa31.16■■■□□ 2.58
HECTD4-203ENST00000547085 URB2Q14146 1524 aaKnown RBP31.16■■■□□ 2.58
HECTD4-203ENST00000547085 HNRNPUL2Q1KMD3 747 aaKnown RBP31.1■■■□□ 2.57
HECTD4-203ENST00000547085 RRBP1Q9P2E9 1410 aaKnown RBP31.08■■■□□ 2.57
HECTD4-203ENST00000547085 ABCA5Q8WWZ7 1642 aa31.05■■■□□ 2.56
HECTD4-203ENST00000547085 KANK4Q5T7N3 995 aaPredicted RBP31.04■■■□□ 2.56
HECTD4-203ENST00000547085 EFCAB5A4FU69 1503 aa31.04■■■□□ 2.56
HECTD4-203ENST00000547085 CTTNBP2Q8WZ74 1663 aa31.03■■■□□ 2.56
HECTD4-203ENST00000547085 TIAM1Q13009 1591 aa31.03■■■□□ 2.56
HECTD4-203ENST00000547085 FHAD1B1AJZ9 1412 aa31.03■■■□□ 2.56
HECTD4-203ENST00000547085 KIF21AQ7Z4S6 1674 aa31.01■■■□□ 2.55
HECTD4-203ENST00000547085 CFAP43Q8NDM7 1665 aa30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms