RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 NISCHQ9Y2I1 1504 aa40.37■■■■■ 4.05
CCDC38-203ENST00000546803 CCDC180Q9P1Z9 1646 aa35.72■■■■□ 3.31
CCDC38-203ENST00000546803 ABCC9O60706 1549 aa34.84■■■■□ 3.17
CCDC38-203ENST00000546803 DCAF8L2P0C7V8 631 aa33.71■■■□□ 2.99
CCDC38-203ENST00000546803 ZCCHC6Q5VYS8 1495 aaKnown RBP33.67■■■□□ 2.98
CCDC38-203ENST00000546803 NACADO15069 1562 aa33.64■■■□□ 2.98
CCDC38-203ENST00000546803 RB1CC1Q8TDY2 1594 aa33.6■■■□□ 2.97
CCDC38-203ENST00000546803 MYO15BQ96JP2 1530 aa33.53■■■□□ 2.96
CCDC38-203ENST00000546803 DCAF1Q9Y4B6 1507 aa33.44■■■□□ 2.94
CCDC38-203ENST00000546803 PABPN1Q86U42 306 aaKnown RBP eCLIP32.64■■■□□ 2.82
CCDC38-203ENST00000546803 UNC13AQ9UPW8 1703 aa32.62■■■□□ 2.81
CCDC38-203ENST00000546803 SCRIBQ14160 1630 aa32.6■■■□□ 2.81
CCDC38-203ENST00000546803 BICRAQ9NZM4 1560 aa32.53■■■□□ 2.8
CCDC38-203ENST00000546803 SHROOM4Q9ULL8 1493 aa32.32■■■□□ 2.76
CCDC38-203ENST00000546803 DNAJC5BQ9UF47 199 aa31.84■■■□□ 2.69
CCDC38-203ENST00000546803 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
CCDC38-203ENST00000546803 CC2D2AQ9P2K1 1620 aa31.48■■■□□ 2.63
CCDC38-203ENST00000546803 CECR2Q9BXF3 1484 aa31.41■■■□□ 2.62
CCDC38-203ENST00000546803 BAZ1AQ9NRL2 1556 aaPredicted RBP31.28■■■□□ 2.6
CCDC38-203ENST00000546803 SMARCA4P51532 1647 aa31.23■■■□□ 2.59
CCDC38-203ENST00000546803 ATAD2BQ9ULI0 1458 aa31.1■■■□□ 2.57
CCDC38-203ENST00000546803 MROH2BQ7Z745 1585 aa31.09■■■□□ 2.57
CCDC38-203ENST00000546803 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
CCDC38-203ENST00000546803 SMARCA2P51531 1590 aa31.05■■■□□ 2.56
CCDC38-203ENST00000546803 PEG3Q9GZU2 1588 aa30.96■■■□□ 2.55
CCDC38-203ENST00000546803 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
CCDC38-203ENST00000546803 RSF1Q96T23 1441 aaPredicted RBP30.86■■■□□ 2.53
CCDC38-203ENST00000546803 BAZ1BQ9UIG0 1483 aaKnown RBP30.83■■■□□ 2.53
CCDC38-203ENST00000546803 WIZO95785 1651 aa30.69■■■□□ 2.5
CCDC38-203ENST00000546803 TOP2AP11388 1531 aaKnown RBP30.46■■■□□ 2.47
CCDC38-203ENST00000546803 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
CCDC38-203ENST00000546803 CADPSQ9ULU8 1353 aa30.2■■■□□ 2.43
CCDC38-203ENST00000546803 NESP48681 1621 aa30.18■■■□□ 2.42
CCDC38-203ENST00000546803 LAMC3Q9Y6N6 1575 aa30.15■■■□□ 2.42
CCDC38-203ENST00000546803 CCDC88BA6NC98 1476 aa30.12■■■□□ 2.41
CCDC38-203ENST00000546803 ERCC6Q03468 1493 aa30.05■■■□□ 2.4
CCDC38-203ENST00000546803 PDS5BQ9NTI5 1447 aa30.04■■■□□ 2.4
CCDC38-203ENST00000546803 CFTRP13569 1480 aa30.03■■■□□ 2.4
CCDC38-203ENST00000546803 FANCD2Q9BXW9 1451 aa29.8■■■□□ 2.36
CCDC38-203ENST00000546803 CEP164Q9UPV0 1460 aa29.74■■■□□ 2.35
CCDC38-203ENST00000546803 KIF21AQ7Z4S6 1674 aa29.72■■■□□ 2.35
CCDC38-203ENST00000546803 CUX2O14529 1486 aa29.68■■■□□ 2.34
CCDC38-203ENST00000546803 MRC2Q9UBG0 1479 aa29.67■■■□□ 2.34
CCDC38-203ENST00000546803 THOC2Q8NI27 1593 aaKnown RBP29.64■■■□□ 2.34
CCDC38-203ENST00000546803 PRDM2Q13029 1718 aa29.58■■■□□ 2.33
CCDC38-203ENST00000546803 WDR62O43379 1518 aa29.53■■■□□ 2.32
CCDC38-203ENST00000546803 URB2Q14146 1524 aaKnown RBP29.45■■■□□ 2.31
CCDC38-203ENST00000546803 ABCC8Q09428 1581 aa29.4■■■□□ 2.3
CCDC38-203ENST00000546803 TOPBP1Q92547 1522 aa29.33■■■□□ 2.29
CCDC38-203ENST00000546803 DNMBPQ6XZF7 1577 aa29.29■■■□□ 2.28
CCDC38-203ENST00000546803 CUX1P39880 1505 aa29.16■■■□□ 2.26
CCDC38-203ENST00000546803 IFT140Q96RY7 1462 aa29.13■■■□□ 2.25
CCDC38-203ENST00000546803 WRNQ14191 1432 aaPredicted RBP eCLIP29.1■■■□□ 2.25
CCDC38-203ENST00000546803 POLA1P09884 1462 aaPredicted RBP29.1■■■□□ 2.25
CCDC38-203ENST00000546803 FGD5Q6ZNL6 1462 aa29.04■■■□□ 2.24
CCDC38-203ENST00000546803 SOGA1O94964 1423 aa29.03■■■□□ 2.24
CCDC38-203ENST00000546803 RAD54L2Q9Y4B4 1467 aa28.96■■■□□ 2.23
CCDC38-203ENST00000546803 TOP2BQ02880 1626 aa28.94■■■□□ 2.22
CCDC38-203ENST00000546803 TARBP1Q13395 1621 aaKnown RBP28.94■■■□□ 2.22
CCDC38-203ENST00000546803 ZNF608Q9ULD9 1512 aaPredicted RBP28.93■■■□□ 2.22
CCDC38-203ENST00000546803 SYNJ1O43426 1573 aa28.91■■■□□ 2.22
CCDC38-203ENST00000546803 BIVM-ERCC5R4GMW8 1640 aa28.9■■■□□ 2.22
CCDC38-203ENST00000546803 TDRD9Q8NDG6 1382 aaKnown RBP28.83■■■□□ 2.21
CCDC38-203ENST00000546803 AQRO60306 1485 aaKnown RBP eCLIP28.82■■■□□ 2.2
CCDC38-203ENST00000546803 ABCA10Q8WWZ4 1543 aa28.8■■■□□ 2.2
CCDC38-203ENST00000546803 WDR97A6NE52 1622 aa28.77■■■□□ 2.2
CCDC38-203ENST00000546803 EIF4G3O43432 1585 aaKnown RBP28.77■■■□□ 2.2
CCDC38-203ENST00000546803 GAPVD1Q14C86 1478 aa28.67■■■□□ 2.18
CCDC38-203ENST00000546803 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
CCDC38-203ENST00000546803 TRIM41Q8WV44 630 aa28.59■■■□□ 2.17
CCDC38-203ENST00000546803 DNAJC5Q9H3Z4 198 aa28.59■■■□□ 2.17
CCDC38-203ENST00000546803 ABCA5Q8WWZ7 1642 aa28.58■■■□□ 2.17
CCDC38-203ENST00000546803 SNAPC4Q5SXM2 1469 aa28.55■■■□□ 2.16
CCDC38-203ENST00000546803 MAGI1Q96QZ7 1491 aaPredicted RBP28.55■■■□□ 2.16
CCDC38-203ENST00000546803 OSCARQ8IYS5 282 aa28.54■■■□□ 2.16
CCDC38-203ENST00000546803 KIF27Q86VH2 1401 aa28.51■■■□□ 2.15
CCDC38-203ENST00000546803 FBLN2P98095 1184 aa28.48■■■□□ 2.15
CCDC38-203ENST00000546803 CHMP7Q8WUX9 453 aaPredicted RBP28.46■■■□□ 2.15
CCDC38-203ENST00000546803 ERICH3Q5RHP9 1530 aa28.45■■■□□ 2.15
CCDC38-203ENST00000546803 SYNJ2O15056 1496 aa28.44■■■□□ 2.14
CCDC38-203ENST00000546803 PBRM1Q86U86 1689 aa28.43■■■□□ 2.14
CCDC38-203ENST00000546803 FHAD1B1AJZ9 1412 aa28.37■■■□□ 2.13
CCDC38-203ENST00000546803 IGF1RP08069 1367 aa28.37■■■□□ 2.13
CCDC38-203ENST00000546803 CHIC1Q5VXU3 224 aa28.34■■■□□ 2.13
CCDC38-203ENST00000546803 ADAMTS12P58397 1594 aa28.31■■■□□ 2.12
CCDC38-203ENST00000546803 CHD1O14646 1710 aa28.29■■■□□ 2.12
CCDC38-203ENST00000546803 GRIN2AQ12879 1464 aa28.27■■■□□ 2.12
CCDC38-203ENST00000546803 RUSC2Q8N2Y8 1516 aa28.21■■■□□ 2.11
CCDC38-203ENST00000546803 CARMIL1Q5VZK9 1371 aa28.21■■■□□ 2.11
CCDC38-203ENST00000546803 CUL7Q14999 1698 aa28.16■■■□□ 2.1
CCDC38-203ENST00000546803 NUP160Q12769 1436 aa28.16■■■□□ 2.1
CCDC38-203ENST00000546803 CLASP1Q7Z460 1538 aa28.11■■■□□ 2.09
CCDC38-203ENST00000546803 EEA1Q15075 1411 aa28.1■■■□□ 2.09
CCDC38-203ENST00000546803 CEP170Q5SW79 1584 aa28.05■■■□□ 2.08
CCDC38-203ENST00000546803 CSRNP3Q8WYN3 585 aa28.05■■■□□ 2.08
CCDC38-203ENST00000546803 RAPGEF2Q9Y4G8 1499 aa28.03■■■□□ 2.08
CCDC38-203ENST00000546803 ARHGEF11O15085 1522 aa27.98■■■□□ 2.07
CCDC38-203ENST00000546803 PRXQ9BXM0 1461 aa27.98■■■□□ 2.07
CCDC38-203ENST00000546803 KIAA0586Q9BVV6 1533 aa27.94■■■□□ 2.06
CCDC38-203ENST00000546803 FAM9AQ8IZU1 332 aaPredicted RBP27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms