RNA–Protein interactions for RNA: ENST00000546293.1

ARAP1-221, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 3

Gene ARAP1, Length 702 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-221ENST00000546293 NISCHQ9Y2I1 1504 aa42.31■■■■■ 4.36
ARAP1-221ENST00000546293 CCDC180Q9P1Z9 1646 aa37.42■■■■□ 3.58
ARAP1-221ENST00000546293 ABCC9O60706 1549 aa36.25■■■■□ 3.39
ARAP1-221ENST00000546293 ZCCHC6Q5VYS8 1495 aaKnown RBP35.33■■■■□ 3.25
ARAP1-221ENST00000546293 NACADO15069 1562 aa35.13■■■■□ 3.21
ARAP1-221ENST00000546293 DCAF8L2P0C7V8 631 aa35.13■■■■□ 3.21
ARAP1-221ENST00000546293 MYO15BQ96JP2 1530 aa35.1■■■■□ 3.21
ARAP1-221ENST00000546293 DCAF1Q9Y4B6 1507 aa35.07■■■■□ 3.21
ARAP1-221ENST00000546293 RB1CC1Q8TDY2 1594 aa35.05■■■■□ 3.2
ARAP1-221ENST00000546293 UNC13AQ9UPW8 1703 aa34.2■■■■□ 3.07
ARAP1-221ENST00000546293 SCRIBQ14160 1630 aa34.13■■■■□ 3.05
ARAP1-221ENST00000546293 BICRAQ9NZM4 1560 aa33.99■■■■□ 3.03
ARAP1-221ENST00000546293 PABPN1Q86U42 306 aaKnown RBP eCLIP33.95■■■■□ 3.034e-7■■□□□ 13.1
ARAP1-221ENST00000546293 SHROOM4Q9ULL8 1493 aa33.72■■■□□ 2.99
ARAP1-221ENST00000546293 EIF4G1Q04637 1599 aaKnown RBP33.05■■■□□ 2.88
ARAP1-221ENST00000546293 DNAJC5BQ9UF47 199 aa33■■■□□ 2.87
ARAP1-221ENST00000546293 CECR2Q9BXF3 1484 aa32.92■■■□□ 2.86
ARAP1-221ENST00000546293 CC2D2AQ9P2K1 1620 aa32.8■■■□□ 2.84
ARAP1-221ENST00000546293 BAZ1AQ9NRL2 1556 aaPredicted RBP32.75■■■□□ 2.83
ARAP1-221ENST00000546293 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
ARAP1-221ENST00000546293 MROH2BQ7Z745 1585 aa32.6■■■□□ 2.81
ARAP1-221ENST00000546293 ATAD2BQ9ULI0 1458 aa32.49■■■□□ 2.79
ARAP1-221ENST00000546293 SMARCA2P51531 1590 aa32.45■■■□□ 2.79
ARAP1-221ENST00000546293 PEG3Q9GZU2 1588 aa32.45■■■□□ 2.79
ARAP1-221ENST00000546293 NCAPD3P42695 1498 aa32.45■■■□□ 2.79
ARAP1-221ENST00000546293 RSF1Q96T23 1441 aaPredicted RBP32.39■■■□□ 2.78
ARAP1-221ENST00000546293 HMGXB3Q12766 1538 aa32.29■■■□□ 2.76
ARAP1-221ENST00000546293 WIZO95785 1651 aa32.22■■■□□ 2.75
ARAP1-221ENST00000546293 BAZ1BQ9UIG0 1483 aaKnown RBP32.21■■■□□ 2.75
ARAP1-221ENST00000546293 TOP2AP11388 1531 aaKnown RBP31.95■■■□□ 2.7
ARAP1-221ENST00000546293 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
ARAP1-221ENST00000546293 CCDC88BA6NC98 1476 aa31.59■■■□□ 2.65
ARAP1-221ENST00000546293 CADPSQ9ULU8 1353 aa31.51■■■□□ 2.63
ARAP1-221ENST00000546293 LAMC3Q9Y6N6 1575 aa31.48■■■□□ 2.63
ARAP1-221ENST00000546293 NESP48681 1621 aa31.48■■■□□ 2.63
ARAP1-221ENST00000546293 CFTRP13569 1480 aa31.4■■■□□ 2.62
ARAP1-221ENST00000546293 PDS5BQ9NTI5 1447 aa31.28■■■□□ 2.6
ARAP1-221ENST00000546293 ERCC6Q03468 1493 aa31.21■■■□□ 2.59
ARAP1-221ENST00000546293 FANCD2Q9BXW9 1451 aa31.11■■■□□ 2.57
ARAP1-221ENST00000546293 PRDM2Q13029 1718 aa31.09■■■□□ 2.57
ARAP1-221ENST00000546293 KIF21AQ7Z4S6 1674 aa31.08■■■□□ 2.57
ARAP1-221ENST00000546293 CEP164Q9UPV0 1460 aa31.02■■■□□ 2.56
ARAP1-221ENST00000546293 THOC2Q8NI27 1593 aaKnown RBP30.93■■■□□ 2.54
ARAP1-221ENST00000546293 MRC2Q9UBG0 1479 aa30.91■■■□□ 2.54
ARAP1-221ENST00000546293 WDR62O43379 1518 aa30.81■■■□□ 2.52
ARAP1-221ENST00000546293 CUX2O14529 1486 aa30.8■■■□□ 2.52
ARAP1-221ENST00000546293 URB2Q14146 1524 aaKnown RBP30.78■■■□□ 2.52
ARAP1-221ENST00000546293 ABCC8Q09428 1581 aa30.7■■■□□ 2.5
ARAP1-221ENST00000546293 TOPBP1Q92547 1522 aa30.66■■■□□ 2.5
ARAP1-221ENST00000546293 DNMBPQ6XZF7 1577 aa30.64■■■□□ 2.5
ARAP1-221ENST00000546293 CUX1P39880 1505 aa30.56■■■□□ 2.48
ARAP1-221ENST00000546293 WRNQ14191 1432 aaPredicted RBP eCLIP30.51■■■□□ 2.47
ARAP1-221ENST00000546293 POLA1P09884 1462 aaPredicted RBP30.43■■■□□ 2.46
ARAP1-221ENST00000546293 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
ARAP1-221ENST00000546293 IFT140Q96RY7 1462 aa30.39■■■□□ 2.46
ARAP1-221ENST00000546293 FGD5Q6ZNL6 1462 aa30.38■■■□□ 2.45
ARAP1-221ENST00000546293 SYNJ1O43426 1573 aa30.38■■■□□ 2.45
ARAP1-221ENST00000546293 BIVM-ERCC5R4GMW8 1640 aa30.37■■■□□ 2.45
ARAP1-221ENST00000546293 SOGA1O94964 1423 aa30.31■■■□□ 2.44
ARAP1-221ENST00000546293 TARBP1Q13395 1621 aaKnown RBP30.29■■■□□ 2.44
ARAP1-221ENST00000546293 RAD54L2Q9Y4B4 1467 aa30.28■■■□□ 2.44
ARAP1-221ENST00000546293 ZNF608Q9ULD9 1512 aaPredicted RBP30.19■■■□□ 2.42
ARAP1-221ENST00000546293 ABCA10Q8WWZ4 1543 aa30.15■■■□□ 2.42
ARAP1-221ENST00000546293 WDR97A6NE52 1622 aa30.1■■■□□ 2.41
ARAP1-221ENST00000546293 AQRO60306 1485 aaKnown RBP eCLIP30.08■■■□□ 2.413e-8■■■■■ 28
ARAP1-221ENST00000546293 TDRD9Q8NDG6 1382 aaKnown RBP30.08■■■□□ 2.41
ARAP1-221ENST00000546293 EIF4G3O43432 1585 aaKnown RBP30.06■■■□□ 2.4
ARAP1-221ENST00000546293 TRIM41Q8WV44 630 aa30.03■■■□□ 2.4
ARAP1-221ENST00000546293 GAPVD1Q14C86 1478 aa29.96■■■□□ 2.39
ARAP1-221ENST00000546293 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
ARAP1-221ENST00000546293 CHIC1Q5VXU3 224 aa29.94■■■□□ 2.38
ARAP1-221ENST00000546293 GRIN2BQ13224 1484 aa29.92■■■□□ 2.38
ARAP1-221ENST00000546293 KIF27Q86VH2 1401 aa29.85■■■□□ 2.37
ARAP1-221ENST00000546293 PBRM1Q86U86 1689 aa29.8■■■□□ 2.36
ARAP1-221ENST00000546293 SNAPC4Q5SXM2 1469 aa29.8■■■□□ 2.36
ARAP1-221ENST00000546293 MAGI1Q96QZ7 1491 aaPredicted RBP29.8■■■□□ 2.36
ARAP1-221ENST00000546293 ERICH3Q5RHP9 1530 aa29.78■■■□□ 2.36
ARAP1-221ENST00000546293 IGF1RP08069 1367 aa29.72■■■□□ 2.35
ARAP1-221ENST00000546293 SYNJ2O15056 1496 aa29.68■■■□□ 2.34
ARAP1-221ENST00000546293 RUSC2Q8N2Y8 1516 aa29.67■■■□□ 2.34
ARAP1-221ENST00000546293 FHAD1B1AJZ9 1412 aa29.64■■■□□ 2.34
ARAP1-221ENST00000546293 ADAMTS12P58397 1594 aa29.64■■■□□ 2.33
ARAP1-221ENST00000546293 CHMP7Q8WUX9 453 aaPredicted RBP29.62■■■□□ 2.33
ARAP1-221ENST00000546293 FBLN2P98095 1184 aa29.6■■■□□ 2.33
ARAP1-221ENST00000546293 OSCARQ8IYS5 282 aa29.59■■■□□ 2.33
ARAP1-221ENST00000546293 CHD1O14646 1710 aa29.57■■■□□ 2.32
ARAP1-221ENST00000546293 EEA1Q15075 1411 aa29.54■■■□□ 2.32
ARAP1-221ENST00000546293 CUL7Q14999 1698 aa29.54■■■□□ 2.32
ARAP1-221ENST00000546293 CARMIL1Q5VZK9 1371 aa29.52■■■□□ 2.32
ARAP1-221ENST00000546293 GRIN2AQ12879 1464 aa29.52■■■□□ 2.32
ARAP1-221ENST00000546293 CSRNP3Q8WYN3 585 aa29.45■■■□□ 2.31
ARAP1-221ENST00000546293 DNAJC5Q9H3Z4 198 aa29.44■■■□□ 2.3
ARAP1-221ENST00000546293 NUP160Q12769 1436 aa29.41■■■□□ 2.3
ARAP1-221ENST00000546293 PRXQ9BXM0 1461 aa29.39■■■□□ 2.3
ARAP1-221ENST00000546293 RAPGEF2Q9Y4G8 1499 aa29.38■■■□□ 2.29
ARAP1-221ENST00000546293 CLASP1Q7Z460 1538 aa29.35■■■□□ 2.29
ARAP1-221ENST00000546293 FAM9AQ8IZU1 332 aaPredicted RBP29.34■■■□□ 2.29
ARAP1-221ENST00000546293 CEP170Q5SW79 1584 aa29.34■■■□□ 2.29
ARAP1-221ENST00000546293 KIAA0586Q9BVV6 1533 aa29.21■■■□□ 2.27
ARAP1-221ENST00000546293 KIF21BO75037 1637 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms