RNA–Protein interactions for RNA: ENST00000545641.5

RIC1-207, Transcript of RIC1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 1 (best)

Gene RIC1, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIC1-207ENST00000545641 NISCHQ9Y2I1 1504 aa9.9□□□□□ -0.82
RIC1-207ENST00000545641 CCDC180Q9P1Z9 1646 aa9□□□□□ -0.97
RIC1-207ENST00000545641 DCAF1Q9Y4B6 1507 aa8.44□□□□□ -1.06
RIC1-207ENST00000545641 MYO15BQ96JP2 1530 aa8.42□□□□□ -1.06
RIC1-207ENST00000545641 ZCCHC6Q5VYS8 1495 aaKnown RBP8.4□□□□□ -1.07
RIC1-207ENST00000545641 ABCC9O60706 1549 aa8.34□□□□□ -1.07
RIC1-207ENST00000545641 DCAF8L2P0C7V8 631 aa8.33□□□□□ -1.08
RIC1-207ENST00000545641 UNC13AQ9UPW8 1703 aa8.26□□□□□ -1.09
RIC1-207ENST00000545641 NACADO15069 1562 aa8.18□□□□□ -1.1
RIC1-207ENST00000545641 RB1CC1Q8TDY2 1594 aa8.06□□□□□ -1.12
RIC1-207ENST00000545641 BICRAQ9NZM4 1560 aa8.01□□□□□ -1.13
RIC1-207ENST00000545641 SHROOM4Q9ULL8 1493 aa7.98□□□□□ -1.13
RIC1-207ENST00000545641 PABPN1Q86U42 306 aaKnown RBP eCLIP7.93□□□□□ -1.14
RIC1-207ENST00000545641 SCRIBQ14160 1630 aa7.85□□□□□ -1.15
RIC1-207ENST00000545641 CHIC1Q5VXU3 224 aa7.83□□□□□ -1.16
RIC1-207ENST00000545641 PEG3Q9GZU2 1588 aa7.82□□□□□ -1.16
RIC1-207ENST00000545641 SMARCA4P51532 1647 aa7.71□□□□□ -1.18
RIC1-207ENST00000545641 DNAJC5BQ9UF47 199 aa7.71□□□□□ -1.18
RIC1-207ENST00000545641 EIF4G1Q04637 1599 aaKnown RBP7.68□□□□□ -1.18
RIC1-207ENST00000545641 BAZ1AQ9NRL2 1556 aaPredicted RBP7.66□□□□□ -1.18
RIC1-207ENST00000545641 AEBP2Q6ZN18 517 aaPredicted RBP7.66□□□□□ -1.18
RIC1-207ENST00000545641 PRDM2Q13029 1718 aa7.65□□□□□ -1.18
RIC1-207ENST00000545641 SMARCA2P51531 1590 aa7.63□□□□□ -1.19
RIC1-207ENST00000545641 HMGXB3Q12766 1538 aa7.6□□□□□ -1.19
RIC1-207ENST00000545641 MROH2BQ7Z745 1585 aa7.59□□□□□ -1.19
RIC1-207ENST00000545641 WIZO95785 1651 aa7.58□□□□□ -1.2
RIC1-207ENST00000545641 CECR2Q9BXF3 1484 aa7.56□□□□□ -1.2
RIC1-207ENST00000545641 TOP2AP11388 1531 aaKnown RBP7.54□□□□□ -1.2
RIC1-207ENST00000545641 RSF1Q96T23 1441 aaPredicted RBP7.52□□□□□ -1.21
RIC1-207ENST00000545641 CC2D2AQ9P2K1 1620 aa7.5□□□□□ -1.21
RIC1-207ENST00000545641 NCAPD3P42695 1498 aa7.47□□□□□ -1.21
RIC1-207ENST00000545641 ATAD2BQ9ULI0 1458 aa7.46□□□□□ -1.22
RIC1-207ENST00000545641 SUPT5HO00267 1087 aaKnown RBP7.36□□□□□ -1.23
RIC1-207ENST00000545641 BIVM-ERCC5R4GMW8 1640 aa7.35□□□□□ -1.23
RIC1-207ENST00000545641 WDR97A6NE52 1622 aa7.34□□□□□ -1.23
RIC1-207ENST00000545641 LAMC3Q9Y6N6 1575 aa7.31□□□□□ -1.24
RIC1-207ENST00000545641 CCDC88BA6NC98 1476 aa7.3□□□□□ -1.24
RIC1-207ENST00000545641 BAZ1BQ9UIG0 1483 aaKnown RBP7.3□□□□□ -1.24
RIC1-207ENST00000545641 KIF21AQ7Z4S6 1674 aa7.29□□□□□ -1.24
RIC1-207ENST00000545641 CFTRP13569 1480 aa7.27□□□□□ -1.25
RIC1-207ENST00000545641 THOC2Q8NI27 1593 aaKnown RBP7.27□□□□□ -1.25
RIC1-207ENST00000545641 TOP2BQ02880 1626 aa7.23□□□□□ -1.25
RIC1-207ENST00000545641 NESP48681 1621 aa7.19□□□□□ -1.26
RIC1-207ENST00000545641 SYNJ1O43426 1573 aa7.19□□□□□ -1.26
RIC1-207ENST00000545641 WDR62O43379 1518 aa7.18□□□□□ -1.26
RIC1-207ENST00000545641 ERCC6Q03468 1493 aa7.18□□□□□ -1.26
RIC1-207ENST00000545641 TARBP1Q13395 1621 aaKnown RBP7.17□□□□□ -1.26
RIC1-207ENST00000545641 DNMBPQ6XZF7 1577 aa7.15□□□□□ -1.27
RIC1-207ENST00000545641 ABCA5Q8WWZ7 1642 aa7.14□□□□□ -1.27
RIC1-207ENST00000545641 CUX1P39880 1505 aa7.14□□□□□ -1.27
RIC1-207ENST00000545641 PBRM1Q86U86 1689 aa7.1□□□□□ -1.27
RIC1-207ENST00000545641 CADPSQ9ULU8 1353 aa7.09□□□□□ -1.27
RIC1-207ENST00000545641 URB2Q14146 1524 aaKnown RBP7.09□□□□□ -1.28
RIC1-207ENST00000545641 ABCC8Q09428 1581 aa7.08□□□□□ -1.28
RIC1-207ENST00000545641 TOPBP1Q92547 1522 aa7.04□□□□□ -1.28
RIC1-207ENST00000545641 FANCD2Q9BXW9 1451 aa7.04□□□□□ -1.28
RIC1-207ENST00000545641 KIF21BO75037 1637 aa7.03□□□□□ -1.28
RIC1-207ENST00000545641 PDS5BQ9NTI5 1447 aa7.02□□□□□ -1.29
RIC1-207ENST00000545641 ABCA10Q8WWZ4 1543 aa7.02□□□□□ -1.29
RIC1-207ENST00000545641 CUX2O14529 1486 aa7.01□□□□□ -1.29
RIC1-207ENST00000545641 MRC2Q9UBG0 1479 aa7.01□□□□□ -1.29
RIC1-207ENST00000545641 CUL7Q14999 1698 aa7.01□□□□□ -1.29
RIC1-207ENST00000545641 FBLN2P98095 1184 aa7□□□□□ -1.29
RIC1-207ENST00000545641 CEP164Q9UPV0 1460 aa7□□□□□ -1.29
RIC1-207ENST00000545641 CTTNBP2Q8WZ74 1663 aa7□□□□□ -1.29
RIC1-207ENST00000545641 EIF4G3O43432 1585 aaKnown RBP6.99□□□□□ -1.29
RIC1-207ENST00000545641 POLA1P09884 1462 aaPredicted RBP6.98□□□□□ -1.29
RIC1-207ENST00000545641 ADAMTS12P58397 1594 aa6.97□□□□□ -1.29
RIC1-207ENST00000545641 ERICH3Q5RHP9 1530 aa6.97□□□□□ -1.29
RIC1-207ENST00000545641 WRNQ14191 1432 aaPredicted RBP eCLIP6.96□□□□□ -1.3
RIC1-207ENST00000545641 FGD5Q6ZNL6 1462 aa6.95□□□□□ -1.3
RIC1-207ENST00000545641 EHMT2Q96KQ7 1210 aa6.95□□□□□ -1.3
RIC1-207ENST00000545641 SHROOM2Q13796 1616 aa6.95□□□□□ -1.3
RIC1-207ENST00000545641 PRXQ9BXM0 1461 aa6.91□□□□□ -1.3
RIC1-207ENST00000545641 CHD1O14646 1710 aa6.91□□□□□ -1.3
RIC1-207ENST00000545641 SAMD9Q5K651 1589 aa6.91□□□□□ -1.3
RIC1-207ENST00000545641 LRRIQ1Q96JM4 1722 aa6.9□□□□□ -1.3
RIC1-207ENST00000545641 IFT140Q96RY7 1462 aa6.9□□□□□ -1.3
RIC1-207ENST00000545641 RUSC2Q8N2Y8 1516 aa6.9□□□□□ -1.3
RIC1-207ENST00000545641 TRIM41Q8WV44 630 aa6.9□□□□□ -1.3
RIC1-207ENST00000545641 TDRD9Q8NDG6 1382 aaKnown RBP6.9□□□□□ -1.31
RIC1-207ENST00000545641 EEA1Q15075 1411 aa6.89□□□□□ -1.31
RIC1-207ENST00000545641 FAM9AQ8IZU1 332 aaPredicted RBP6.88□□□□□ -1.31
RIC1-207ENST00000545641 TTBK1Q5TCY1 1321 aaPredicted RBP6.88□□□□□ -1.31
RIC1-207ENST00000545641 CLASP1Q7Z460 1538 aa6.87□□□□□ -1.31
RIC1-207ENST00000545641 RAD54L2Q9Y4B4 1467 aa6.87□□□□□ -1.31
RIC1-207ENST00000545641 AQRO60306 1485 aaKnown RBP eCLIP6.87□□□□□ -1.313e-6■■■■■ 36.4
RIC1-207ENST00000545641 DNAJC5Q9H3Z4 198 aa6.86□□□□□ -1.31
RIC1-207ENST00000545641 ZNF608Q9ULD9 1512 aaPredicted RBP6.86□□□□□ -1.31
RIC1-207ENST00000545641 RANGAP1P46060 587 aaPredicted RBP6.84□□□□□ -1.31
RIC1-207ENST00000545641 CEP170Q5SW79 1584 aa6.84□□□□□ -1.31
RIC1-207ENST00000545641 SOGA1O94964 1423 aa6.84□□□□□ -1.31
RIC1-207ENST00000545641 CHMP7Q8WUX9 453 aaPredicted RBP6.84□□□□□ -1.31
RIC1-207ENST00000545641 PHF23Q9BUL5 403 aaPredicted RBP6.83□□□□□ -1.32
RIC1-207ENST00000545641 OSCARQ8IYS5 282 aa6.83□□□□□ -1.32
RIC1-207ENST00000545641 MAGI1Q96QZ7 1491 aaPredicted RBP6.83□□□□□ -1.32
RIC1-207ENST00000545641 CFAP43Q8NDM7 1665 aa6.81□□□□□ -1.32
RIC1-207ENST00000545641 CYB5RLQ6IPT4 315 aa6.79□□□□□ -1.32
RIC1-207ENST00000545641 NUP160Q12769 1436 aa6.79□□□□□ -1.32
RIC1-207ENST00000545641 UGGT2Q9NYU1 1516 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms