RNA–Protein interactions for RNA: ENST00000545065.1

KNTC1-214, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-214ENST00000545065 NISCHQ9Y2I1 1504 aa21.87■■□□□ 1.09
KNTC1-214ENST00000545065 DNAJC5BQ9UF47 199 aa21.83■■□□□ 1.09
KNTC1-214ENST00000545065 ABCC9O60706 1549 aa21.72■■□□□ 1.07
KNTC1-214ENST00000545065 DNAJC5Q9H3Z4 198 aa20.98■□□□□ 0.95
KNTC1-214ENST00000545065 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.83
KNTC1-214ENST00000545065 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
KNTC1-214ENST00000545065 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
KNTC1-214ENST00000545065 UNC13AQ9UPW8 1703 aa19.73■□□□□ 0.75
KNTC1-214ENST00000545065 CECR2Q9BXF3 1484 aa19.69■□□□□ 0.74
KNTC1-214ENST00000545065 BICRAQ9NZM4 1560 aa19.62■□□□□ 0.73
KNTC1-214ENST00000545065 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.73
KNTC1-214ENST00000545065 NACADO15069 1562 aa19.46■□□□□ 0.71
KNTC1-214ENST00000545065 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
KNTC1-214ENST00000545065 CUX2O14529 1486 aa19.26■□□□□ 0.67
KNTC1-214ENST00000545065 EIF4G1Q04637 1599 aaKnown RBP19.15■□□□□ 0.66
KNTC1-214ENST00000545065 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
KNTC1-214ENST00000545065 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
KNTC1-214ENST00000545065 ERCC6Q03468 1493 aa18.73■□□□□ 0.59
KNTC1-214ENST00000545065 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
KNTC1-214ENST00000545065 AEBP2Q6ZN18 517 aaPredicted RBP18.48■□□□□ 0.55
KNTC1-214ENST00000545065 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
KNTC1-214ENST00000545065 SCRIBQ14160 1630 aa18.41■□□□□ 0.54
KNTC1-214ENST00000545065 NESP48681 1621 aa18.31■□□□□ 0.52
KNTC1-214ENST00000545065 ILDR1Q86SU0 546 aaPredicted RBP18.22■□□□□ 0.51
KNTC1-214ENST00000545065 RIMBP3CA6NJZ7 1639 aa18.17■□□□□ 0.5
KNTC1-214ENST00000545065 RIMBP3BA6NNM3 1639 aa18.17■□□□□ 0.5
KNTC1-214ENST00000545065 RIMBP3Q9UFD9 1639 aa18.17■□□□□ 0.5
KNTC1-214ENST00000545065 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
KNTC1-214ENST00000545065 SMARCA2P51531 1590 aa18.08■□□□□ 0.49
KNTC1-214ENST00000545065 OSCARQ8IYS5 282 aa18.05■□□□□ 0.48
KNTC1-214ENST00000545065 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
KNTC1-214ENST00000545065 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
KNTC1-214ENST00000545065 TRHP20396 242 aaPredicted RBP17.97■□□□□ 0.47
KNTC1-214ENST00000545065 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
KNTC1-214ENST00000545065 ARHGEF11O15085 1522 aa17.93■□□□□ 0.46
KNTC1-214ENST00000545065 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
KNTC1-214ENST00000545065 LAMC3Q9Y6N6 1575 aa17.82■□□□□ 0.44
KNTC1-214ENST00000545065 CYB5RLQ6IPT4 315 aa17.78■□□□□ 0.44
KNTC1-214ENST00000545065 ATAD2BQ9ULI0 1458 aa17.77■□□□□ 0.44
KNTC1-214ENST00000545065 WDR62O43379 1518 aa17.77■□□□□ 0.43
KNTC1-214ENST00000545065 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
KNTC1-214ENST00000545065 MRC2Q9UBG0 1479 aa17.7■□□□□ 0.42
KNTC1-214ENST00000545065 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
KNTC1-214ENST00000545065 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
KNTC1-214ENST00000545065 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
KNTC1-214ENST00000545065 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
KNTC1-214ENST00000545065 CADPSQ9ULU8 1353 aa17.35■□□□□ 0.37
KNTC1-214ENST00000545065 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
KNTC1-214ENST00000545065 ZNF608Q9ULD9 1512 aaPredicted RBP17.27■□□□□ 0.36
KNTC1-214ENST00000545065 KDM4FA0A1W2PPD8 638 aa17.27■□□□□ 0.36
KNTC1-214ENST00000545065 RSF1Q96T23 1441 aaPredicted RBP17.27■□□□□ 0.35
KNTC1-214ENST00000545065 CHD1O14646 1710 aa17.27■□□□□ 0.35
KNTC1-214ENST00000545065 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
KNTC1-214ENST00000545065 URB2Q14146 1524 aaKnown RBP17.23■□□□□ 0.35
KNTC1-214ENST00000545065 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
KNTC1-214ENST00000545065 LMTK3Q96Q04 1460 aa17.12■□□□□ 0.33
KNTC1-214ENST00000545065 ERCC6L2Q5T890 1561 aa17.09■□□□□ 0.33
KNTC1-214ENST00000545065 FBXO41Q8TF61 875 aa17.08■□□□□ 0.32
KNTC1-214ENST00000545065 EIF4G3O43432 1585 aaKnown RBP17.07■□□□□ 0.32
KNTC1-214ENST00000545065 SOCS7O14512 581 aa17.05■□□□□ 0.32
KNTC1-214ENST00000545065 ILDR2Q71H61 639 aa17.04■□□□□ 0.32
KNTC1-214ENST00000545065 KIF13AQ9H1H9 1805 aa17.03■□□□□ 0.32
KNTC1-214ENST00000545065 HECW2Q9P2P5 1572 aa17.03■□□□□ 0.32
KNTC1-214ENST00000545065 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
KNTC1-214ENST00000545065 IFT140Q96RY7 1462 aa17.01■□□□□ 0.31
KNTC1-214ENST00000545065 CFTRP13569 1480 aa16.89■□□□□ 0.29
KNTC1-214ENST00000545065 FBLN2P98095 1184 aa16.89■□□□□ 0.29
KNTC1-214ENST00000545065 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.29
KNTC1-214ENST00000545065 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.29
KNTC1-214ENST00000545065 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
KNTC1-214ENST00000545065 SYNJ2O15056 1496 aa16.76■□□□□ 0.27
KNTC1-214ENST00000545065 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
KNTC1-214ENST00000545065 ADGRL1O94910 1474 aa16.74■□□□□ 0.27
KNTC1-214ENST00000545065 SYNJ1O43426 1573 aa16.73■□□□□ 0.27
KNTC1-214ENST00000545065 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
KNTC1-214ENST00000545065 KDM6BO15054 1643 aa16.73■□□□□ 0.27
KNTC1-214ENST00000545065 DISP3Q9P2K9 1392 aa16.68■□□□□ 0.26
KNTC1-214ENST00000545065 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
KNTC1-214ENST00000545065 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
KNTC1-214ENST00000545065 WIZO95785 1651 aa16.62■□□□□ 0.25
KNTC1-214ENST00000545065 ABCC10Q5T3U5 1492 aa16.57■□□□□ 0.24
KNTC1-214ENST00000545065 DIP2BQ9P265 1576 aa16.55■□□□□ 0.24
KNTC1-214ENST00000545065 FAM69CQ0P6D2 419 aa16.54■□□□□ 0.24
KNTC1-214ENST00000545065 TSPOAP1O95153 1857 aa16.53■□□□□ 0.24
KNTC1-214ENST00000545065 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
KNTC1-214ENST00000545065 CHMP7Q8WUX9 453 aaPredicted RBP16.51■□□□□ 0.23
KNTC1-214ENST00000545065 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
KNTC1-214ENST00000545065 SPATA31D1Q6ZQQ2 1576 aa16.47■□□□□ 0.23
KNTC1-214ENST00000545065 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
KNTC1-214ENST00000545065 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
KNTC1-214ENST00000545065 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
KNTC1-214ENST00000545065 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
KNTC1-214ENST00000545065 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
KNTC1-214ENST00000545065 MAPKBP1O60336 1514 aa16.4■□□□□ 0.22
KNTC1-214ENST00000545065 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
KNTC1-214ENST00000545065 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
KNTC1-214ENST00000545065 PPRC1Q5VV67 1664 aaKnown RBP16.32■□□□□ 0.2
KNTC1-214ENST00000545065 GRIN2BQ13224 1484 aa16.31■□□□□ 0.2
KNTC1-214ENST00000545065 COL17A1Q9UMD9 1497 aaPredicted RBP16.29■□□□□ 0.2
KNTC1-214ENST00000545065 SOGA1O94964 1423 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms