RNA–Protein interactions for RNA: ENST00000544836.5

NTF3-206, Transcript of neurotrophin 3, humanhuman

TSL 3

Gene NTF3, Length 480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3-206ENST00000544836 NISCHQ9Y2I1 1504 aa34.67■■■■□ 3.14
NTF3-206ENST00000544836 CCDC180Q9P1Z9 1646 aa30.43■■■□□ 2.46
NTF3-206ENST00000544836 ABCC9O60706 1549 aa30.06■■■□□ 2.4
NTF3-206ENST00000544836 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
NTF3-206ENST00000544836 DNAJC5BQ9UF47 199 aa29.02■■■□□ 2.24
NTF3-206ENST00000544836 DCAF1Q9Y4B6 1507 aa28.76■■■□□ 2.19
NTF3-206ENST00000544836 DCAF8L2P0C7V8 631 aa28.54■■■□□ 2.16
NTF3-206ENST00000544836 MYO15BQ96JP2 1530 aa28.49■■■□□ 2.15
NTF3-206ENST00000544836 NACADO15069 1562 aa28.33■■■□□ 2.12
NTF3-206ENST00000544836 RB1CC1Q8TDY2 1594 aa28.15■■■□□ 2.1
NTF3-206ENST00000544836 SHROOM4Q9ULL8 1493 aa28.03■■■□□ 2.08
NTF3-206ENST00000544836 PABPN1Q86U42 306 aaKnown RBP eCLIP27.91■■■□□ 2.06
NTF3-206ENST00000544836 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
NTF3-206ENST00000544836 UNC13AQ9UPW8 1703 aa27.49■■□□□ 1.99
NTF3-206ENST00000544836 DNAJC5Q9H3Z4 198 aa27.34■■□□□ 1.97
NTF3-206ENST00000544836 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
NTF3-206ENST00000544836 CECR2Q9BXF3 1484 aa27.15■■□□□ 1.94
NTF3-206ENST00000544836 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
NTF3-206ENST00000544836 SUPT5HO00267 1087 aaKnown RBP26.94■■□□□ 1.9
NTF3-206ENST00000544836 BAZ1AQ9NRL2 1556 aaPredicted RBP26.84■■□□□ 1.89
NTF3-206ENST00000544836 RSF1Q96T23 1441 aaPredicted RBP26.79■■□□□ 1.88
NTF3-206ENST00000544836 EIF4G1Q04637 1599 aaKnown RBP26.75■■□□□ 1.87
NTF3-206ENST00000544836 MROH2BQ7Z745 1585 aa26.72■■□□□ 1.87
NTF3-206ENST00000544836 SMARCA4P51532 1647 aa26.7■■□□□ 1.86
NTF3-206ENST00000544836 WIZO95785 1651 aa26.52■■□□□ 1.84
NTF3-206ENST00000544836 PEG3Q9GZU2 1588 aa26.42■■□□□ 1.82
NTF3-206ENST00000544836 SMARCA2P51531 1590 aa26.33■■□□□ 1.8
NTF3-206ENST00000544836 TOP2AP11388 1531 aaKnown RBP26.32■■□□□ 1.8
NTF3-206ENST00000544836 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
NTF3-206ENST00000544836 CUX2O14529 1486 aa26.23■■□□□ 1.79
NTF3-206ENST00000544836 BAZ1BQ9UIG0 1483 aaKnown RBP26.14■■□□□ 1.78
NTF3-206ENST00000544836 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
NTF3-206ENST00000544836 NCAPD3P42695 1498 aa26.07■■□□□ 1.76
NTF3-206ENST00000544836 ERCC6Q03468 1493 aa26.05■■□□□ 1.76
NTF3-206ENST00000544836 CCDC88BA6NC98 1476 aa25.97■■□□□ 1.75
NTF3-206ENST00000544836 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
NTF3-206ENST00000544836 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
NTF3-206ENST00000544836 NESP48681 1621 aa25.53■■□□□ 1.68
NTF3-206ENST00000544836 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
NTF3-206ENST00000544836 CFTRP13569 1480 aa25.45■■□□□ 1.66
NTF3-206ENST00000544836 THOC2Q8NI27 1593 aaKnown RBP25.38■■□□□ 1.65
NTF3-206ENST00000544836 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
NTF3-206ENST00000544836 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
NTF3-206ENST00000544836 WRNQ14191 1432 aaPredicted RBP eCLIP25.28■■□□□ 1.64
NTF3-206ENST00000544836 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
NTF3-206ENST00000544836 KIF21AQ7Z4S6 1674 aa25.16■■□□□ 1.62
NTF3-206ENST00000544836 SYNJ1O43426 1573 aa25.14■■□□□ 1.62
NTF3-206ENST00000544836 BIVM-ERCC5R4GMW8 1640 aa25.13■■□□□ 1.61
NTF3-206ENST00000544836 TOP2BQ02880 1626 aa25.12■■□□□ 1.61
NTF3-206ENST00000544836 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
NTF3-206ENST00000544836 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
NTF3-206ENST00000544836 OSCARQ8IYS5 282 aa25.01■■□□□ 1.59
NTF3-206ENST00000544836 CUX1P39880 1505 aa25.01■■□□□ 1.59
NTF3-206ENST00000544836 CEP164Q9UPV0 1460 aa25■■□□□ 1.59
NTF3-206ENST00000544836 EEA1Q15075 1411 aa24.95■■□□□ 1.59
NTF3-206ENST00000544836 DNMBPQ6XZF7 1577 aa24.92■■□□□ 1.58
NTF3-206ENST00000544836 MRC2Q9UBG0 1479 aa24.91■■□□□ 1.58
NTF3-206ENST00000544836 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
NTF3-206ENST00000544836 WDR62O43379 1518 aa24.83■■□□□ 1.57
NTF3-206ENST00000544836 SOGA1O94964 1423 aa24.83■■□□□ 1.57
NTF3-206ENST00000544836 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
NTF3-206ENST00000544836 FGD5Q6ZNL6 1462 aa24.78■■□□□ 1.56
NTF3-206ENST00000544836 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
NTF3-206ENST00000544836 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
NTF3-206ENST00000544836 CSRNP3Q8WYN3 585 aa24.7■■□□□ 1.54
NTF3-206ENST00000544836 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
NTF3-206ENST00000544836 RIMBP3CA6NJZ7 1639 aa24.68■■□□□ 1.54
NTF3-206ENST00000544836 RIMBP3BA6NNM3 1639 aa24.68■■□□□ 1.54
NTF3-206ENST00000544836 RIMBP3Q9UFD9 1639 aa24.68■■□□□ 1.54
NTF3-206ENST00000544836 POLA1P09884 1462 aaPredicted RBP24.67■■□□□ 1.54
NTF3-206ENST00000544836 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
NTF3-206ENST00000544836 TRHP20396 242 aaPredicted RBP24.61■■□□□ 1.53
NTF3-206ENST00000544836 KIF21BO75037 1637 aa24.61■■□□□ 1.53
NTF3-206ENST00000544836 AEBP2Q6ZN18 517 aaPredicted RBP24.6■■□□□ 1.53
NTF3-206ENST00000544836 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
NTF3-206ENST00000544836 WDR97A6NE52 1622 aa24.56■■□□□ 1.52
NTF3-206ENST00000544836 GOLGA3Q08378 1498 aa24.55■■□□□ 1.52
NTF3-206ENST00000544836 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
NTF3-206ENST00000544836 CYB5RLQ6IPT4 315 aa24.51■■□□□ 1.51
NTF3-206ENST00000544836 ARHGEF11O15085 1522 aa24.49■■□□□ 1.51
NTF3-206ENST00000544836 ERICH3Q5RHP9 1530 aa24.47■■□□□ 1.51
NTF3-206ENST00000544836 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
NTF3-206ENST00000544836 PRXQ9BXM0 1461 aa24.44■■□□□ 1.5
NTF3-206ENST00000544836 EHMT2Q96KQ7 1210 aa24.42■■□□□ 1.5
NTF3-206ENST00000544836 IFT140Q96RY7 1462 aa24.42■■□□□ 1.5
NTF3-206ENST00000544836 ABCA5Q8WWZ7 1642 aa24.42■■□□□ 1.5
NTF3-206ENST00000544836 TNIKQ9UKE5 1360 aa24.42■■□□□ 1.5
NTF3-206ENST00000544836 IGF1RP08069 1367 aa24.38■■□□□ 1.49
NTF3-206ENST00000544836 CUL7Q14999 1698 aa24.37■■□□□ 1.49
NTF3-206ENST00000544836 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
NTF3-206ENST00000544836 RAPGEF2Q9Y4G8 1499 aa24.36■■□□□ 1.49
NTF3-206ENST00000544836 GAPVD1Q14C86 1478 aa24.34■■□□□ 1.49
NTF3-206ENST00000544836 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
NTF3-206ENST00000544836 TDRD9Q8NDG6 1382 aaKnown RBP24.29■■□□□ 1.48
NTF3-206ENST00000544836 PBRM1Q86U86 1689 aa24.28■■□□□ 1.48
NTF3-206ENST00000544836 CEP162Q5TB80 1403 aa24.25■■□□□ 1.47
NTF3-206ENST00000544836 ZNF608Q9ULD9 1512 aaPredicted RBP24.23■■□□□ 1.47
NTF3-206ENST00000544836 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
NTF3-206ENST00000544836 EIF4G3O43432 1585 aaKnown RBP24.18■■□□□ 1.46
NTF3-206ENST00000544836 AQRO60306 1485 aaKnown RBP eCLIP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 567.8 ms