RNA–Protein interactions for RNA: ENST00000544418.1

BCAT1-208, Transcript of branched chain amino acid transaminase 1, humanhuman

TSL 1 (best)

Gene BCAT1, Length 2,320 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAT1-208ENST00000544418 NISCHQ9Y2I1 1504 aa31.91■■■□□ 2.7
BCAT1-208ENST00000544418 CCDC180Q9P1Z9 1646 aa28.06■■■□□ 2.08
BCAT1-208ENST00000544418 ABCC9O60706 1549 aa26.91■■□□□ 1.9
BCAT1-208ENST00000544418 ZCCHC6Q5VYS8 1495 aaKnown RBP26.73■■□□□ 1.87
BCAT1-208ENST00000544418 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
BCAT1-208ENST00000544418 DCAF1Q9Y4B6 1507 aa26.39■■□□□ 1.82
BCAT1-208ENST00000544418 MYO15BQ96JP2 1530 aa26.25■■□□□ 1.79
BCAT1-208ENST00000544418 NACADO15069 1562 aa26.23■■□□□ 1.79
BCAT1-208ENST00000544418 RB1CC1Q8TDY2 1594 aa26.11■■□□□ 1.77
BCAT1-208ENST00000544418 SHROOM4Q9ULL8 1493 aa25.78■■□□□ 1.72
BCAT1-208ENST00000544418 SCRIBQ14160 1630 aa25.73■■□□□ 1.71
BCAT1-208ENST00000544418 UNC13AQ9UPW8 1703 aa25.59■■□□□ 1.69
BCAT1-208ENST00000544418 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
BCAT1-208ENST00000544418 BICRAQ9NZM4 1560 aa25.34■■□□□ 1.65
BCAT1-208ENST00000544418 PABPN1Q86U42 306 aaKnown RBP eCLIP25.26■■□□□ 1.63
BCAT1-208ENST00000544418 CHIC1Q5VXU3 224 aa24.92■■□□□ 1.58
BCAT1-208ENST00000544418 CECR2Q9BXF3 1484 aa24.82■■□□□ 1.56
BCAT1-208ENST00000544418 HRCP23327 699 aa24.79■■□□□ 1.56
BCAT1-208ENST00000544418 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
BCAT1-208ENST00000544418 SMARCA4P51532 1647 aa24.64■■□□□ 1.53
BCAT1-208ENST00000544418 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
BCAT1-208ENST00000544418 EIF4G1Q04637 1599 aaKnown RBP24.61■■□□□ 1.53
BCAT1-208ENST00000544418 RSF1Q96T23 1441 aaPredicted RBP24.56■■□□□ 1.52
BCAT1-208ENST00000544418 PCGF6Q9BYE7 350 aa24.55■■□□□ 1.52
BCAT1-208ENST00000544418 WIZO95785 1651 aa24.41■■□□□ 1.5
BCAT1-208ENST00000544418 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
BCAT1-208ENST00000544418 PEG3Q9GZU2 1588 aa24.36■■□□□ 1.49
BCAT1-208ENST00000544418 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
BCAT1-208ENST00000544418 SMARCA2P51531 1590 aa24.31■■□□□ 1.48
BCAT1-208ENST00000544418 LOC105371045A0A1W2PR82 267 aa24.22■■□□□ 1.47
BCAT1-208ENST00000544418 PPARGC1BQ86YN6 1023 aaKnown RBP24.22■■□□□ 1.47
BCAT1-208ENST00000544418 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
BCAT1-208ENST00000544418 BAZ1BQ9UIG0 1483 aaKnown RBP24.17■■□□□ 1.46
BCAT1-208ENST00000544418 TOP2AP11388 1531 aaKnown RBP24.15■■□□□ 1.46
BCAT1-208ENST00000544418 HMGXB3Q12766 1538 aa24.14■■□□□ 1.46
BCAT1-208ENST00000544418 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
BCAT1-208ENST00000544418 TRIM26Q12899 539 aaPredicted RBP24■■□□□ 1.43
BCAT1-208ENST00000544418 CCDC88BA6NC98 1476 aa23.88■■□□□ 1.41
BCAT1-208ENST00000544418 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
BCAT1-208ENST00000544418 ZEB1P37275 1124 aaPredicted RBP23.64■■□□□ 1.38
BCAT1-208ENST00000544418 CFTRP13569 1480 aa23.54■■□□□ 1.36
BCAT1-208ENST00000544418 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
BCAT1-208ENST00000544418 FAM9AQ8IZU1 332 aaPredicted RBP23.53■■□□□ 1.36
BCAT1-208ENST00000544418 NESP48681 1621 aa23.49■■□□□ 1.35
BCAT1-208ENST00000544418 LAMC3Q9Y6N6 1575 aa23.46■■□□□ 1.35
BCAT1-208ENST00000544418 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
BCAT1-208ENST00000544418 EHMT2Q96KQ7 1210 aa23.33■■□□□ 1.33
BCAT1-208ENST00000544418 FANCD2Q9BXW9 1451 aa23.28■■□□□ 1.32
BCAT1-208ENST00000544418 PDS5BQ9NTI5 1447 aa23.27■■□□□ 1.32
BCAT1-208ENST00000544418 ABCC8Q09428 1581 aa23.24■■□□□ 1.31
BCAT1-208ENST00000544418 KIF21AQ7Z4S6 1674 aa23.23■■□□□ 1.31
BCAT1-208ENST00000544418 CEP164Q9UPV0 1460 aa23.19■■□□□ 1.3
BCAT1-208ENST00000544418 WRNQ14191 1432 aaPredicted RBP eCLIP23.13■■□□□ 1.29
BCAT1-208ENST00000544418 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
BCAT1-208ENST00000544418 SYNJ1O43426 1573 aa23.08■■□□□ 1.29
BCAT1-208ENST00000544418 CUX1P39880 1505 aa23.07■■□□□ 1.28
BCAT1-208ENST00000544418 SCAF1Q9H7N4 1312 aaKnown RBP23.07■■□□□ 1.28
BCAT1-208ENST00000544418 PELP1Q8IZL8 1130 aaKnown RBP23.05■■□□□ 1.28
BCAT1-208ENST00000544418 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
BCAT1-208ENST00000544418 MRC2Q9UBG0 1479 aa23.02■■□□□ 1.28
BCAT1-208ENST00000544418 TOP2BQ02880 1626 aa23.02■■□□□ 1.27
BCAT1-208ENST00000544418 BIVM-ERCC5R4GMW8 1640 aa23.01■■□□□ 1.27
BCAT1-208ENST00000544418 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
BCAT1-208ENST00000544418 TOPBP1Q92547 1522 aa22.99■■□□□ 1.27
BCAT1-208ENST00000544418 THOC2Q8NI27 1593 aaKnown RBP22.98■■□□□ 1.27
BCAT1-208ENST00000544418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
BCAT1-208ENST00000544418 CCER1Q8TC90 406 aaPredicted RBP22.94■■□□□ 1.26
BCAT1-208ENST00000544418 WDR62O43379 1518 aa22.93■■□□□ 1.26
BCAT1-208ENST00000544418 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
BCAT1-208ENST00000544418 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
BCAT1-208ENST00000544418 RAD54L2Q9Y4B4 1467 aa22.75■■□□□ 1.23
BCAT1-208ENST00000544418 CUX2O14529 1486 aa22.74■■□□□ 1.23
BCAT1-208ENST00000544418 ACIN1Q9UKV3 1341 aaKnown RBP22.74■■□□□ 1.23
BCAT1-208ENST00000544418 SOGA1O94964 1423 aa22.74■■□□□ 1.23
BCAT1-208ENST00000544418 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
BCAT1-208ENST00000544418 TARBP1Q13395 1621 aaKnown RBP22.7■■□□□ 1.22
BCAT1-208ENST00000544418 DIEXFQ68CQ4 756 aaKnown RBP22.69■■□□□ 1.22
BCAT1-208ENST00000544418 TTBK1Q5TCY1 1321 aaPredicted RBP22.68■■□□□ 1.22
BCAT1-208ENST00000544418 WDR97A6NE52 1622 aa22.67■■□□□ 1.22
BCAT1-208ENST00000544418 ABCA10Q8WWZ4 1543 aa22.67■■□□□ 1.22
BCAT1-208ENST00000544418 NEUROD1Q13562 356 aa22.66■■□□□ 1.22
BCAT1-208ENST00000544418 IFT140Q96RY7 1462 aa22.66■■□□□ 1.22
BCAT1-208ENST00000544418 TNIKQ9UKE5 1360 aa22.65■■□□□ 1.22
BCAT1-208ENST00000544418 RUSC2Q8N2Y8 1516 aa22.64■■□□□ 1.21
BCAT1-208ENST00000544418 KIF27Q86VH2 1401 aa22.58■■□□□ 1.21
BCAT1-208ENST00000544418 EEA1Q15075 1411 aa22.58■■□□□ 1.2
BCAT1-208ENST00000544418 CENPBP07199 599 aaPredicted RBP22.57■■□□□ 1.2
BCAT1-208ENST00000544418 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
BCAT1-208ENST00000544418 ZNF608Q9ULD9 1512 aaPredicted RBP22.56■■□□□ 1.2
BCAT1-208ENST00000544418 TDRD9Q8NDG6 1382 aaKnown RBP22.56■■□□□ 1.2
BCAT1-208ENST00000544418 ABCA5Q8WWZ7 1642 aa22.55■■□□□ 1.2
BCAT1-208ENST00000544418 UBTFP17480 764 aaKnown RBP22.53■■□□□ 1.2
BCAT1-208ENST00000544418 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.191e-7■■■■■ 32.3
BCAT1-208ENST00000544418 GAPVD1Q14C86 1478 aa22.49■■□□□ 1.19
BCAT1-208ENST00000544418 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
BCAT1-208ENST00000544418 GTF3C3Q9Y5Q9 886 aa22.49■■□□□ 1.19
BCAT1-208ENST00000544418 AEBP2Q6ZN18 517 aaPredicted RBP22.46■■□□□ 1.19
BCAT1-208ENST00000544418 GOLGA3Q08378 1498 aa22.45■■□□□ 1.18
BCAT1-208ENST00000544418 PBRM1Q86U86 1689 aa22.43■■□□□ 1.18
BCAT1-208ENST00000544418 IGF1RP08069 1367 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms