RNA–Protein interactions for RNA: ENST00000543882.5

TM7SF3-215, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 5

Gene TM7SF3, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-215ENST00000543882 AEBP2Q6ZN18 517 aaPredicted RBP22.39■■□□□ 1.17
TM7SF3-215ENST00000543882 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
TM7SF3-215ENST00000543882 NISCHQ9Y2I1 1504 aa19.25■□□□□ 0.67
TM7SF3-215ENST00000543882 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
TM7SF3-215ENST00000543882 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
TM7SF3-215ENST00000543882 FOXD1Q16676 465 aa17.81■□□□□ 0.44
TM7SF3-215ENST00000543882 CCDC180Q9P1Z9 1646 aa17.15■□□□□ 0.34
TM7SF3-215ENST00000543882 ABCC9O60706 1549 aa16.84■□□□□ 0.29
TM7SF3-215ENST00000543882 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
TM7SF3-215ENST00000543882 MSH5O43196 834 aa16.63■□□□□ 0.25
TM7SF3-215ENST00000543882 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
TM7SF3-215ENST00000543882 PIAS4Q8N2W9 510 aaPredicted RBP16.57■□□□□ 0.24
TM7SF3-215ENST00000543882 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
TM7SF3-215ENST00000543882 ADRA2BP18089 450 aa16.48■□□□□ 0.23
TM7SF3-215ENST00000543882 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
TM7SF3-215ENST00000543882 NACADO15069 1562 aa16.09■□□□□ 0.17
TM7SF3-215ENST00000543882 DCAF8L2P0C7V8 631 aa16.06■□□□□ 0.16
TM7SF3-215ENST00000543882 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
TM7SF3-215ENST00000543882 MYO15BQ96JP2 1530 aa15.95■□□□□ 0.14
TM7SF3-215ENST00000543882 UNC13AQ9UPW8 1703 aa15.89■□□□□ 0.13
TM7SF3-215ENST00000543882 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
TM7SF3-215ENST00000543882 BICRAQ9NZM4 1560 aa15.71■□□□□ 0.11
TM7SF3-215ENST00000543882 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
TM7SF3-215ENST00000543882 SCRIBQ14160 1630 aa15.69■□□□□ 0.1
TM7SF3-215ENST00000543882 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
TM7SF3-215ENST00000543882 SHROOM4Q9ULL8 1493 aa15.43■□□□□ 0.06
TM7SF3-215ENST00000543882 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
TM7SF3-215ENST00000543882 CC2D2AQ9P2K1 1620 aa15.24■□□□□ 0.03
TM7SF3-215ENST00000543882 MAPK8IP2Q13387 824 aaPredicted RBP15.21■□□□□ 0.03
TM7SF3-215ENST00000543882 CECR2Q9BXF3 1484 aa15.1■□□□□ 0.01
TM7SF3-215ENST00000543882 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
TM7SF3-215ENST00000543882 SMARCA4P51532 1647 aa14.98□□□□□ -0.01
TM7SF3-215ENST00000543882 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
TM7SF3-215ENST00000543882 BAZ1AQ9NRL2 1556 aaPredicted RBP14.91□□□□□ -0.02
TM7SF3-215ENST00000543882 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
TM7SF3-215ENST00000543882 MROH2BQ7Z745 1585 aa14.87□□□□□ -0.03
TM7SF3-215ENST00000543882 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
TM7SF3-215ENST00000543882 SMARCA2P51531 1590 aa14.83□□□□□ -0.04
TM7SF3-215ENST00000543882 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
TM7SF3-215ENST00000543882 HMGXB3Q12766 1538 aa14.79□□□□□ -0.04
TM7SF3-215ENST00000543882 BAZ1BQ9UIG0 1483 aaKnown RBP14.75□□□□□ -0.05
TM7SF3-215ENST00000543882 WIZO95785 1651 aa14.74□□□□□ -0.05
TM7SF3-215ENST00000543882 RSF1Q96T23 1441 aaPredicted RBP14.65□□□□□ -0.06
TM7SF3-215ENST00000543882 PPP4R3CPQ6ZMV5 832 aa14.63□□□□□ -0.07
TM7SF3-215ENST00000543882 NESP48681 1621 aa14.59□□□□□ -0.07
TM7SF3-215ENST00000543882 TOP2AP11388 1531 aaKnown RBP14.53□□□□□ -0.08
TM7SF3-215ENST00000543882 LAMC3Q9Y6N6 1575 aa14.48□□□□□ -0.09
TM7SF3-215ENST00000543882 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
TM7SF3-215ENST00000543882 DCAF8L1A6NGE4 600 aa14.46□□□□□ -0.09
TM7SF3-215ENST00000543882 HOXD11P31277 338 aaPredicted RBP14.45□□□□□ -0.1
TM7SF3-215ENST00000543882 KIF21AQ7Z4S6 1674 aa14.44□□□□□ -0.1
TM7SF3-215ENST00000543882 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
TM7SF3-215ENST00000543882 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
TM7SF3-215ENST00000543882 THOC2Q8NI27 1593 aaKnown RBP14.38□□□□□ -0.11
TM7SF3-215ENST00000543882 CNKSR2Q8WXI2 1034 aa14.35□□□□□ -0.11
TM7SF3-215ENST00000543882 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
TM7SF3-215ENST00000543882 PDS5BQ9NTI5 1447 aa14.33□□□□□ -0.11
TM7SF3-215ENST00000543882 CFTRP13569 1480 aa14.32□□□□□ -0.12
TM7SF3-215ENST00000543882 CUX2O14529 1486 aa14.31□□□□□ -0.12
TM7SF3-215ENST00000543882 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
TM7SF3-215ENST00000543882 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
TM7SF3-215ENST00000543882 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
TM7SF3-215ENST00000543882 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
TM7SF3-215ENST00000543882 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
TM7SF3-215ENST00000543882 SUPT5HO00267 1087 aaKnown RBP14.23□□□□□ -0.13
TM7SF3-215ENST00000543882 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
TM7SF3-215ENST00000543882 WDR62O43379 1518 aa14.22□□□□□ -0.13
TM7SF3-215ENST00000543882 URB2Q14146 1524 aaKnown RBP14.16□□□□□ -0.14
TM7SF3-215ENST00000543882 TOPBP1Q92547 1522 aa14.05□□□□□ -0.16
TM7SF3-215ENST00000543882 DNMBPQ6XZF7 1577 aa14.03□□□□□ -0.16
TM7SF3-215ENST00000543882 ABCC8Q09428 1581 aa13.96□□□□□ -0.17
TM7SF3-215ENST00000543882 C1QBPQ07021 282 aaKnown RBP13.96□□□□□ -0.17
TM7SF3-215ENST00000543882 CUX1P39880 1505 aa13.95□□□□□ -0.18
TM7SF3-215ENST00000543882 ZNF608Q9ULD9 1512 aaPredicted RBP13.94□□□□□ -0.18
TM7SF3-215ENST00000543882 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
TM7SF3-215ENST00000543882 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
TM7SF3-215ENST00000543882 TARBP1Q13395 1621 aaKnown RBP13.93□□□□□ -0.18
TM7SF3-215ENST00000543882 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
TM7SF3-215ENST00000543882 DNAJC5Q9H3Z4 198 aa13.91□□□□□ -0.18
TM7SF3-215ENST00000543882 FGD5Q6ZNL6 1462 aa13.9□□□□□ -0.18
TM7SF3-215ENST00000543882 EIF4G3O43432 1585 aaKnown RBP13.9□□□□□ -0.18
TM7SF3-215ENST00000543882 RAD54L2Q9Y4B4 1467 aa13.89□□□□□ -0.19
TM7SF3-215ENST00000543882 WDR97A6NE52 1622 aa13.84□□□□□ -0.19
TM7SF3-215ENST00000543882 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
TM7SF3-215ENST00000543882 SYNJ1O43426 1573 aa13.83□□□□□ -0.19
TM7SF3-215ENST00000543882 SOGA1O94964 1423 aa13.83□□□□□ -0.2
TM7SF3-215ENST00000543882 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.2
TM7SF3-215ENST00000543882 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
TM7SF3-215ENST00000543882 TOP2BQ02880 1626 aa13.8□□□□□ -0.2
TM7SF3-215ENST00000543882 WRNQ14191 1432 aaPredicted RBP eCLIP13.8□□□□□ -0.2
TM7SF3-215ENST00000543882 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
TM7SF3-215ENST00000543882 CHD1O14646 1710 aa13.76□□□□□ -0.21
TM7SF3-215ENST00000543882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.21
TM7SF3-215ENST00000543882 PBRM1Q86U86 1689 aa13.74□□□□□ -0.21
TM7SF3-215ENST00000543882 ABCA5Q8WWZ7 1642 aa13.73□□□□□ -0.21
TM7SF3-215ENST00000543882 ABCA10Q8WWZ4 1543 aa13.73□□□□□ -0.21
TM7SF3-215ENST00000543882 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.21
TM7SF3-215ENST00000543882 GRIN2BQ13224 1484 aa13.68□□□□□ -0.22
TM7SF3-215ENST00000543882 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
TM7SF3-215ENST00000543882 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms