RNA–Protein interactions for RNA: ENST00000542669.1

PACRG-206, Transcript of parkin coregulated, humanhuman

TSL 4

Gene PACRG, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-206ENST00000542669 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
PACRG-206ENST00000542669 AEBP2Q6ZN18 517 aaPredicted RBP14.62□□□□□ -0.07
PACRG-206ENST00000542669 CHIC1Q5VXU3 224 aa13.6□□□□□ -0.23
PACRG-206ENST00000542669 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
PACRG-206ENST00000542669 ZCCHC6Q5VYS8 1495 aaKnown RBP13.02□□□□□ -0.33
PACRG-206ENST00000542669 DCAF1Q9Y4B6 1507 aa12.83□□□□□ -0.35
PACRG-206ENST00000542669 ABCC9O60706 1549 aa12.82□□□□□ -0.36
PACRG-206ENST00000542669 DCAF8L2P0C7V8 631 aa12.72□□□□□ -0.37
PACRG-206ENST00000542669 MYO15BQ96JP2 1530 aa12.72□□□□□ -0.37
PACRG-206ENST00000542669 NACADO15069 1562 aa12.64□□□□□ -0.39
PACRG-206ENST00000542669 SHROOM4Q9ULL8 1493 aa12.53□□□□□ -0.4
PACRG-206ENST00000542669 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.4
PACRG-206ENST00000542669 SENP3Q9H4L4 574 aaPredicted RBP12.52□□□□□ -0.41
PACRG-206ENST00000542669 SCRIBQ14160 1630 aa12.42□□□□□ -0.42
PACRG-206ENST00000542669 PHF23Q9BUL5 403 aaPredicted RBP12.3□□□□□ -0.44
PACRG-206ENST00000542669 UNC13AQ9UPW8 1703 aa12.28□□□□□ -0.44
PACRG-206ENST00000542669 BICRAQ9NZM4 1560 aa12.17□□□□□ -0.46
PACRG-206ENST00000542669 PABPN1Q86U42 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
PACRG-206ENST00000542669 CECR2Q9BXF3 1484 aa12.03□□□□□ -0.48
PACRG-206ENST00000542669 SUPT5HO00267 1087 aaKnown RBP12.02□□□□□ -0.49
PACRG-206ENST00000542669 POTEDQ86YR6 584 aa11.99□□□□□ -0.49
PACRG-206ENST00000542669 RSF1Q96T23 1441 aaPredicted RBP11.99□□□□□ -0.49
PACRG-206ENST00000542669 BAZ1AQ9NRL2 1556 aaPredicted RBP11.96□□□□□ -0.49
PACRG-206ENST00000542669 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.5
PACRG-206ENST00000542669 SMARCA4P51532 1647 aa11.93□□□□□ -0.5
PACRG-206ENST00000542669 WIZO95785 1651 aa11.86□□□□□ -0.51
PACRG-206ENST00000542669 PEG3Q9GZU2 1588 aa11.81□□□□□ -0.52
PACRG-206ENST00000542669 EIF4G1Q04637 1599 aaKnown RBP11.79□□□□□ -0.52
PACRG-206ENST00000542669 FOXD1Q16676 465 aa11.77□□□□□ -0.53
PACRG-206ENST00000542669 TOP2AP11388 1531 aaKnown RBP11.75□□□□□ -0.53
PACRG-206ENST00000542669 ATAD2BQ9ULI0 1458 aa11.74□□□□□ -0.53
PACRG-206ENST00000542669 SMARCA2P51531 1590 aa11.74□□□□□ -0.53
PACRG-206ENST00000542669 NCAPD3P42695 1498 aa11.65□□□□□ -0.54
PACRG-206ENST00000542669 BAZ1BQ9UIG0 1483 aaKnown RBP11.65□□□□□ -0.54
PACRG-206ENST00000542669 HMGXB3Q12766 1538 aa11.65□□□□□ -0.55
PACRG-206ENST00000542669 CC2D2AQ9P2K1 1620 aa11.62□□□□□ -0.55
PACRG-206ENST00000542669 CCDC88BA6NC98 1476 aa11.62□□□□□ -0.55
PACRG-206ENST00000542669 CFTRP13569 1480 aa11.38□□□□□ -0.59
PACRG-206ENST00000542669 DNAJC5BQ9UF47 199 aa11.35□□□□□ -0.59
PACRG-206ENST00000542669 ABCC8Q09428 1581 aa11.34□□□□□ -0.59
PACRG-206ENST00000542669 PRDM2Q13029 1718 aa11.34□□□□□ -0.59
PACRG-206ENST00000542669 CADPSQ9ULU8 1353 aa11.33□□□□□ -0.6
PACRG-206ENST00000542669 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
PACRG-206ENST00000542669 WRNQ14191 1432 aaPredicted RBP eCLIP11.27□□□□□ -0.6
PACRG-206ENST00000542669 LAMC3Q9Y6N6 1575 aa11.26□□□□□ -0.61
PACRG-206ENST00000542669 SYNJ1O43426 1573 aa11.25□□□□□ -0.61
PACRG-206ENST00000542669 NESP48681 1621 aa11.24□□□□□ -0.61
PACRG-206ENST00000542669 TOP2BQ02880 1626 aa11.21□□□□□ -0.61
PACRG-206ENST00000542669 BIVM-ERCC5R4GMW8 1640 aa11.21□□□□□ -0.61
PACRG-206ENST00000542669 FANCD2Q9BXW9 1451 aa11.21□□□□□ -0.61
PACRG-206ENST00000542669 MSH5O43196 834 aa11.2□□□□□ -0.62
PACRG-206ENST00000542669 CUX1P39880 1505 aa11.19□□□□□ -0.62
PACRG-206ENST00000542669 PDS5BQ9NTI5 1447 aa11.16□□□□□ -0.62
PACRG-206ENST00000542669 CEP164Q9UPV0 1460 aa11.14□□□□□ -0.63
PACRG-206ENST00000542669 KIF21AQ7Z4S6 1674 aa11.13□□□□□ -0.63
PACRG-206ENST00000542669 DNMBPQ6XZF7 1577 aa11.11□□□□□ -0.63
PACRG-206ENST00000542669 SOGA1O94964 1423 aa11.11□□□□□ -0.63
PACRG-206ENST00000542669 EEA1Q15075 1411 aa11.09□□□□□ -0.63
PACRG-206ENST00000542669 TOPBP1Q92547 1522 aa11.09□□□□□ -0.63
PACRG-206ENST00000542669 URB2Q14146 1524 aaKnown RBP11.09□□□□□ -0.63
PACRG-206ENST00000542669 FAM9AQ8IZU1 332 aaPredicted RBP11.08□□□□□ -0.64
PACRG-206ENST00000542669 FGD5Q6ZNL6 1462 aa11.07□□□□□ -0.64
PACRG-206ENST00000542669 RUSC2Q8N2Y8 1516 aa11.07□□□□□ -0.64
PACRG-206ENST00000542669 LOC105371045A0A1W2PR82 267 aa11.04□□□□□ -0.64
PACRG-206ENST00000542669 POLA1P09884 1462 aaPredicted RBP11.03□□□□□ -0.64
PACRG-206ENST00000542669 MRC2Q9UBG0 1479 aa11.03□□□□□ -0.64
PACRG-206ENST00000542669 CSRNP3Q8WYN3 585 aa11.01□□□□□ -0.65
PACRG-206ENST00000542669 KIF27Q86VH2 1401 aa11□□□□□ -0.65
PACRG-206ENST00000542669 ERCC6Q03468 1493 aa11□□□□□ -0.65
PACRG-206ENST00000542669 WDR62O43379 1518 aa10.99□□□□□ -0.65
PACRG-206ENST00000542669 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
PACRG-206ENST00000542669 CUX2O14529 1486 aa10.98□□□□□ -0.65
PACRG-206ENST00000542669 RAD54L2Q9Y4B4 1467 aa10.98□□□□□ -0.65
PACRG-206ENST00000542669 THOC2Q8NI27 1593 aaKnown RBP10.98□□□□□ -0.65
PACRG-206ENST00000542669 WDR97A6NE52 1622 aa10.98□□□□□ -0.65
PACRG-206ENST00000542669 KIF21BO75037 1637 aa10.97□□□□□ -0.65
PACRG-206ENST00000542669 TARBP1Q13395 1621 aaKnown RBP10.95□□□□□ -0.66
PACRG-206ENST00000542669 GOLGA3Q08378 1498 aa10.93□□□□□ -0.66
PACRG-206ENST00000542669 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
PACRG-206ENST00000542669 ABCA5Q8WWZ7 1642 aa10.91□□□□□ -0.66
PACRG-206ENST00000542669 EHMT2Q96KQ7 1210 aa10.91□□□□□ -0.66
PACRG-206ENST00000542669 IGF1RP08069 1367 aa10.9□□□□□ -0.66
PACRG-206ENST00000542669 ERICH3Q5RHP9 1530 aa10.9□□□□□ -0.66
PACRG-206ENST00000542669 RAPGEF2Q9Y4G8 1499 aa10.9□□□□□ -0.66
PACRG-206ENST00000542669 IFT140Q96RY7 1462 aa10.89□□□□□ -0.67
PACRG-206ENST00000542669 TNIKQ9UKE5 1360 aa10.89□□□□□ -0.67
PACRG-206ENST00000542669 TDRD9Q8NDG6 1382 aaKnown RBP10.87□□□□□ -0.67
PACRG-206ENST00000542669 GAPVD1Q14C86 1478 aa10.87□□□□□ -0.67
PACRG-206ENST00000542669 CUL7Q14999 1698 aa10.85□□□□□ -0.67
PACRG-206ENST00000542669 PIAS4Q8N2W9 510 aaPredicted RBP10.84□□□□□ -0.67
PACRG-206ENST00000542669 CARMIL1Q5VZK9 1371 aa10.84□□□□□ -0.67
PACRG-206ENST00000542669 UBTFP17480 764 aaKnown RBP10.83□□□□□ -0.68
PACRG-206ENST00000542669 PBRM1Q86U86 1689 aa10.82□□□□□ -0.68
PACRG-206ENST00000542669 ZNF608Q9ULD9 1512 aaPredicted RBP10.82□□□□□ -0.68
PACRG-206ENST00000542669 CEP162Q5TB80 1403 aa10.82□□□□□ -0.68
PACRG-206ENST00000542669 AQRO60306 1485 aaKnown RBP eCLIP10.81□□□□□ -0.68
PACRG-206ENST00000542669 EIF4G3O43432 1585 aaKnown RBP10.8□□□□□ -0.68
PACRG-206ENST00000542669 GRIN2BQ13224 1484 aa10.8□□□□□ -0.68
PACRG-206ENST00000542669 ADAMTS12P58397 1594 aa10.77□□□□□ -0.69
PACRG-206ENST00000542669 FHAD1B1AJZ9 1412 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms