RNA–Protein interactions for RNA: ENST00000542648.1

MMP17-209, Transcript of matrix metallopeptidase 17, humanhuman

TSL 5

Gene MMP17, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-209ENST00000542648 NISCHQ9Y2I1 1504 aa40.44■■■■■ 4.06
MMP17-209ENST00000542648 CCDC180Q9P1Z9 1646 aa35.75■■■■□ 3.31
MMP17-209ENST00000542648 ABCC9O60706 1549 aa34.52■■■■□ 3.12
MMP17-209ENST00000542648 ZCCHC6Q5VYS8 1495 aaKnown RBP33.76■■■■□ 3
MMP17-209ENST00000542648 DCAF8L2P0C7V8 631 aa33.61■■■□□ 2.97
MMP17-209ENST00000542648 NACADO15069 1562 aa33.55■■■□□ 2.96
MMP17-209ENST00000542648 MYO15BQ96JP2 1530 aa33.55■■■□□ 2.96
MMP17-209ENST00000542648 DCAF1Q9Y4B6 1507 aa33.54■■■□□ 2.96
MMP17-209ENST00000542648 RB1CC1Q8TDY2 1594 aa33.47■■■□□ 2.95
MMP17-209ENST00000542648 SCRIBQ14160 1630 aa32.58■■■□□ 2.81
MMP17-209ENST00000542648 UNC13AQ9UPW8 1703 aa32.53■■■□□ 2.8
MMP17-209ENST00000542648 BICRAQ9NZM4 1560 aa32.36■■■□□ 2.77
MMP17-209ENST00000542648 PABPN1Q86U42 306 aaKnown RBP eCLIP32.34■■■□□ 2.77
MMP17-209ENST00000542648 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
MMP17-209ENST00000542648 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.63
MMP17-209ENST00000542648 CECR2Q9BXF3 1484 aa31.4■■■□□ 2.62
MMP17-209ENST00000542648 BAZ1AQ9NRL2 1556 aaPredicted RBP31.34■■■□□ 2.61
MMP17-209ENST00000542648 DNAJC5BQ9UF47 199 aa31.29■■■□□ 2.6
MMP17-209ENST00000542648 SMARCA4P51532 1647 aa31.24■■■□□ 2.59
MMP17-209ENST00000542648 CC2D2AQ9P2K1 1620 aa31.24■■■□□ 2.59
MMP17-209ENST00000542648 MROH2BQ7Z745 1585 aa31.13■■■□□ 2.57
MMP17-209ENST00000542648 SMARCA2P51531 1590 aa31.03■■■□□ 2.56
MMP17-209ENST00000542648 ATAD2BQ9ULI0 1458 aa31.01■■■□□ 2.55
MMP17-209ENST00000542648 PEG3Q9GZU2 1588 aa30.99■■■□□ 2.55
MMP17-209ENST00000542648 RSF1Q96T23 1441 aaPredicted RBP30.98■■■□□ 2.55
MMP17-209ENST00000542648 NCAPD3P42695 1498 aa30.97■■■□□ 2.55
MMP17-209ENST00000542648 HMGXB3Q12766 1538 aa30.83■■■□□ 2.53
MMP17-209ENST00000542648 BAZ1BQ9UIG0 1483 aaKnown RBP30.79■■■□□ 2.52
MMP17-209ENST00000542648 WIZO95785 1651 aa30.77■■■□□ 2.52
MMP17-209ENST00000542648 TOP2AP11388 1531 aaKnown RBP30.55■■■□□ 2.48
MMP17-209ENST00000542648 SUPT5HO00267 1087 aaKnown RBP30.51■■■□□ 2.47
MMP17-209ENST00000542648 CCDC88BA6NC98 1476 aa30.19■■■□□ 2.42
MMP17-209ENST00000542648 CADPSQ9ULU8 1353 aa30.09■■■□□ 2.41
MMP17-209ENST00000542648 LAMC3Q9Y6N6 1575 aa30.06■■■□□ 2.4
MMP17-209ENST00000542648 CFTRP13569 1480 aa29.99■■■□□ 2.39
MMP17-209ENST00000542648 NESP48681 1621 aa29.97■■■□□ 2.39
MMP17-209ENST00000542648 PDS5BQ9NTI5 1447 aa29.89■■■□□ 2.38
MMP17-209ENST00000542648 ERCC6Q03468 1493 aa29.78■■■□□ 2.36
MMP17-209ENST00000542648 FANCD2Q9BXW9 1451 aa29.71■■■□□ 2.35
MMP17-209ENST00000542648 PRDM2Q13029 1718 aa29.67■■■□□ 2.34
MMP17-209ENST00000542648 CEP164Q9UPV0 1460 aa29.63■■■□□ 2.33
MMP17-209ENST00000542648 KIF21AQ7Z4S6 1674 aa29.6■■■□□ 2.33
MMP17-209ENST00000542648 MRC2Q9UBG0 1479 aa29.5■■■□□ 2.31
MMP17-209ENST00000542648 THOC2Q8NI27 1593 aaKnown RBP29.43■■■□□ 2.3
MMP17-209ENST00000542648 ABCC8Q09428 1581 aa29.39■■■□□ 2.3
MMP17-209ENST00000542648 WDR62O43379 1518 aa29.36■■■□□ 2.29
MMP17-209ENST00000542648 URB2Q14146 1524 aaKnown RBP29.35■■■□□ 2.29
MMP17-209ENST00000542648 CUX2O14529 1486 aa29.34■■■□□ 2.29
MMP17-209ENST00000542648 DNMBPQ6XZF7 1577 aa29.27■■■□□ 2.28
MMP17-209ENST00000542648 DNAJC5Q9H3Z4 198 aa29.27■■■□□ 2.28
MMP17-209ENST00000542648 TOPBP1Q92547 1522 aa29.26■■■□□ 2.27
MMP17-209ENST00000542648 WRNQ14191 1432 aaPredicted RBP eCLIP29.22■■■□□ 2.27
MMP17-209ENST00000542648 CUX1P39880 1505 aa29.17■■■□□ 2.26
MMP17-209ENST00000542648 TOP2BQ02880 1626 aa29.07■■■□□ 2.24
MMP17-209ENST00000542648 POLA1P09884 1462 aaPredicted RBP29.04■■■□□ 2.24
MMP17-209ENST00000542648 BIVM-ERCC5R4GMW8 1640 aa29.04■■■□□ 2.24
MMP17-209ENST00000542648 SYNJ1O43426 1573 aa29.03■■■□□ 2.24
MMP17-209ENST00000542648 FGD5Q6ZNL6 1462 aa29.03■■■□□ 2.24
MMP17-209ENST00000542648 IFT140Q96RY7 1462 aa29.03■■■□□ 2.24
MMP17-209ENST00000542648 SOGA1O94964 1423 aa28.98■■■□□ 2.23
MMP17-209ENST00000542648 TARBP1Q13395 1621 aaKnown RBP28.88■■■□□ 2.21
MMP17-209ENST00000542648 RAD54L2Q9Y4B4 1467 aa28.88■■■□□ 2.21
MMP17-209ENST00000542648 TRIM41Q8WV44 630 aa28.86■■■□□ 2.21
MMP17-209ENST00000542648 ABCA10Q8WWZ4 1543 aa28.81■■■□□ 2.2
MMP17-209ENST00000542648 WDR97A6NE52 1622 aa28.77■■■□□ 2.2
MMP17-209ENST00000542648 ZNF608Q9ULD9 1512 aaPredicted RBP28.77■■■□□ 2.2
MMP17-209ENST00000542648 CHIC1Q5VXU3 224 aa28.75■■■□□ 2.19
MMP17-209ENST00000542648 TDRD9Q8NDG6 1382 aaKnown RBP28.74■■■□□ 2.19
MMP17-209ENST00000542648 AQRO60306 1485 aaKnown RBP eCLIP28.68■■■□□ 2.186e-12■■■□□ 18.3
MMP17-209ENST00000542648 EIF4G3O43432 1585 aaKnown RBP28.67■■■□□ 2.18
MMP17-209ENST00000542648 GAPVD1Q14C86 1478 aa28.63■■■□□ 2.17
MMP17-209ENST00000542648 KIF27Q86VH2 1401 aa28.6■■■□□ 2.17
MMP17-209ENST00000542648 GRIN2BQ13224 1484 aa28.59■■■□□ 2.17
MMP17-209ENST00000542648 ABCA5Q8WWZ7 1642 aa28.59■■■□□ 2.17
MMP17-209ENST00000542648 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
MMP17-209ENST00000542648 MAGI1Q96QZ7 1491 aaPredicted RBP28.47■■■□□ 2.15
MMP17-209ENST00000542648 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
MMP17-209ENST00000542648 SNAPC4Q5SXM2 1469 aa28.43■■■□□ 2.14
MMP17-209ENST00000542648 IGF1RP08069 1367 aa28.41■■■□□ 2.14
MMP17-209ENST00000542648 EEA1Q15075 1411 aa28.39■■■□□ 2.14
MMP17-209ENST00000542648 FHAD1B1AJZ9 1412 aa28.35■■■□□ 2.13
MMP17-209ENST00000542648 SYNJ2O15056 1496 aa28.35■■■□□ 2.13
MMP17-209ENST00000542648 RUSC2Q8N2Y8 1516 aa28.34■■■□□ 2.13
MMP17-209ENST00000542648 CHMP7Q8WUX9 453 aaPredicted RBP28.34■■■□□ 2.13
MMP17-209ENST00000542648 FBLN2P98095 1184 aa28.3■■■□□ 2.12
MMP17-209ENST00000542648 ADAMTS12P58397 1594 aa28.28■■■□□ 2.12
MMP17-209ENST00000542648 CUL7Q14999 1698 aa28.28■■■□□ 2.12
MMP17-209ENST00000542648 CARMIL1Q5VZK9 1371 aa28.26■■■□□ 2.12
MMP17-209ENST00000542648 CSRNP3Q8WYN3 585 aa28.26■■■□□ 2.11
MMP17-209ENST00000542648 OSCARQ8IYS5 282 aa28.25■■■□□ 2.11
MMP17-209ENST00000542648 GRIN2AQ12879 1464 aa28.19■■■□□ 2.1
MMP17-209ENST00000542648 CHD1O14646 1710 aa28.17■■■□□ 2.1
MMP17-209ENST00000542648 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
MMP17-209ENST00000542648 PRXQ9BXM0 1461 aa28.14■■■□□ 2.09
MMP17-209ENST00000542648 RAPGEF2Q9Y4G8 1499 aa28.14■■■□□ 2.09
MMP17-209ENST00000542648 NUP160Q12769 1436 aa28.07■■■□□ 2.08
MMP17-209ENST00000542648 CEP170Q5SW79 1584 aa27.98■■■□□ 2.07
MMP17-209ENST00000542648 KIF21BO75037 1637 aa27.96■■■□□ 2.07
MMP17-209ENST00000542648 CLASP1Q7Z460 1538 aa27.95■■■□□ 2.06
MMP17-209ENST00000542648 KIAA0586Q9BVV6 1533 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms