RNA–Protein interactions for RNA: ENST00000542529.5

LRTM2-205, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 559 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-205ENST00000542529 NISCHQ9Y2I1 1504 aa28.6■■■□□ 2.17
LRTM2-205ENST00000542529 CCDC180Q9P1Z9 1646 aa25.22■■□□□ 1.63
LRTM2-205ENST00000542529 ABCC9O60706 1549 aa24.46■■□□□ 1.51
LRTM2-205ENST00000542529 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
LRTM2-205ENST00000542529 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
LRTM2-205ENST00000542529 NACADO15069 1562 aa23.66■■□□□ 1.38
LRTM2-205ENST00000542529 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
LRTM2-205ENST00000542529 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.37
LRTM2-205ENST00000542529 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
LRTM2-205ENST00000542529 UNC13AQ9UPW8 1703 aa23.13■■□□□ 1.29
LRTM2-205ENST00000542529 SCRIBQ14160 1630 aa23.08■■□□□ 1.28
LRTM2-205ENST00000542529 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
LRTM2-205ENST00000542529 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.27
LRTM2-205ENST00000542529 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
LRTM2-205ENST00000542529 DNAJC5BQ9UF47 199 aa22.32■■□□□ 1.16
LRTM2-205ENST00000542529 CECR2Q9BXF3 1484 aa22.3■■□□□ 1.16
LRTM2-205ENST00000542529 EIF4G1Q04637 1599 aaKnown RBP22.29■■□□□ 1.16
LRTM2-205ENST00000542529 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
LRTM2-205ENST00000542529 SMARCA4P51532 1647 aa22.1■■□□□ 1.13
LRTM2-205ENST00000542529 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
LRTM2-205ENST00000542529 MROH2BQ7Z745 1585 aa22.08■■□□□ 1.13
LRTM2-205ENST00000542529 ATAD2BQ9ULI0 1458 aa21.95■■□□□ 1.1
LRTM2-205ENST00000542529 RSF1Q96T23 1441 aaPredicted RBP21.94■■□□□ 1.1
LRTM2-205ENST00000542529 PEG3Q9GZU2 1588 aa21.9■■□□□ 1.1
LRTM2-205ENST00000542529 NCAPD3P42695 1498 aa21.89■■□□□ 1.09
LRTM2-205ENST00000542529 SMARCA2P51531 1590 aa21.86■■□□□ 1.09
LRTM2-205ENST00000542529 WIZO95785 1651 aa21.84■■□□□ 1.09
LRTM2-205ENST00000542529 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
LRTM2-205ENST00000542529 BAZ1BQ9UIG0 1483 aaKnown RBP21.72■■□□□ 1.07
LRTM2-205ENST00000542529 SUPT5HO00267 1087 aaKnown RBP21.58■■□□□ 1.05
LRTM2-205ENST00000542529 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.04
LRTM2-205ENST00000542529 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.01
LRTM2-205ENST00000542529 NESP48681 1621 aa21.29■■□□□ 1
LRTM2-205ENST00000542529 CADPSQ9ULU8 1353 aa21.25■□□□□ 0.99
LRTM2-205ENST00000542529 LAMC3Q9Y6N6 1575 aa21.2■□□□□ 0.98
LRTM2-205ENST00000542529 CFTRP13569 1480 aa21.2■□□□□ 0.98
LRTM2-205ENST00000542529 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
LRTM2-205ENST00000542529 FANCD2Q9BXW9 1451 aa21■□□□□ 0.95
LRTM2-205ENST00000542529 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
LRTM2-205ENST00000542529 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
LRTM2-205ENST00000542529 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
LRTM2-205ENST00000542529 CEP164Q9UPV0 1460 aa20.9■□□□□ 0.94
LRTM2-205ENST00000542529 THOC2Q8NI27 1593 aaKnown RBP20.85■□□□□ 0.93
LRTM2-205ENST00000542529 MRC2Q9UBG0 1479 aa20.82■□□□□ 0.92
LRTM2-205ENST00000542529 URB2Q14146 1524 aaKnown RBP20.8■□□□□ 0.92
LRTM2-205ENST00000542529 WDR62O43379 1518 aa20.76■□□□□ 0.91
LRTM2-205ENST00000542529 TOPBP1Q92547 1522 aa20.7■□□□□ 0.9
LRTM2-205ENST00000542529 CUX2O14529 1486 aa20.69■□□□□ 0.9
LRTM2-205ENST00000542529 CUX1P39880 1505 aa20.68■□□□□ 0.9
LRTM2-205ENST00000542529 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
LRTM2-205ENST00000542529 DNMBPQ6XZF7 1577 aa20.67■□□□□ 0.9
LRTM2-205ENST00000542529 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
LRTM2-205ENST00000542529 SYNJ1O43426 1573 aa20.58■□□□□ 0.88
LRTM2-205ENST00000542529 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
LRTM2-205ENST00000542529 TOP2BQ02880 1626 aa20.54■□□□□ 0.88
LRTM2-205ENST00000542529 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
LRTM2-205ENST00000542529 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
LRTM2-205ENST00000542529 RAD54L2Q9Y4B4 1467 aa20.49■□□□□ 0.87
LRTM2-205ENST00000542529 SOGA1O94964 1423 aa20.47■□□□□ 0.87
LRTM2-205ENST00000542529 TARBP1Q13395 1621 aaKnown RBP20.47■□□□□ 0.87
LRTM2-205ENST00000542529 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
LRTM2-205ENST00000542529 ZNF608Q9ULD9 1512 aaPredicted RBP20.42■□□□□ 0.86
LRTM2-205ENST00000542529 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
LRTM2-205ENST00000542529 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
LRTM2-205ENST00000542529 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
LRTM2-205ENST00000542529 TRIM41Q8WV44 630 aa20.34■□□□□ 0.85
LRTM2-205ENST00000542529 AQRO60306 1485 aaKnown RBP eCLIP20.34■□□□□ 0.85
LRTM2-205ENST00000542529 WDR97A6NE52 1622 aa20.34■□□□□ 0.85
LRTM2-205ENST00000542529 EIF4G3O43432 1585 aaKnown RBP20.28■□□□□ 0.84
LRTM2-205ENST00000542529 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
LRTM2-205ENST00000542529 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
LRTM2-205ENST00000542529 GRIN2BQ13224 1484 aa20.17■□□□□ 0.82
LRTM2-205ENST00000542529 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
LRTM2-205ENST00000542529 KIF27Q86VH2 1401 aa20.14■□□□□ 0.81
LRTM2-205ENST00000542529 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
LRTM2-205ENST00000542529 IGF1RP08069 1367 aa20.11■□□□□ 0.81
LRTM2-205ENST00000542529 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
LRTM2-205ENST00000542529 ERICH3Q5RHP9 1530 aa20.09■□□□□ 0.81
LRTM2-205ENST00000542529 MAGI1Q96QZ7 1491 aaPredicted RBP20.06■□□□□ 0.8
LRTM2-205ENST00000542529 ADAMTS12P58397 1594 aa20■□□□□ 0.79
LRTM2-205ENST00000542529 SYNJ2O15056 1496 aa20■□□□□ 0.79
LRTM2-205ENST00000542529 FHAD1B1AJZ9 1412 aa20■□□□□ 0.79
LRTM2-205ENST00000542529 FBLN2P98095 1184 aa19.98■□□□□ 0.79
LRTM2-205ENST00000542529 CHD1O14646 1710 aa19.97■□□□□ 0.79
LRTM2-205ENST00000542529 CHMP7Q8WUX9 453 aaPredicted RBP19.97■□□□□ 0.79
LRTM2-205ENST00000542529 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.79
LRTM2-205ENST00000542529 FAM9AQ8IZU1 332 aaPredicted RBP19.94■□□□□ 0.78
LRTM2-205ENST00000542529 CSRNP3Q8WYN3 585 aa19.94■□□□□ 0.78
LRTM2-205ENST00000542529 EEA1Q15075 1411 aa19.93■□□□□ 0.78
LRTM2-205ENST00000542529 CUL7Q14999 1698 aa19.93■□□□□ 0.78
LRTM2-205ENST00000542529 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
LRTM2-205ENST00000542529 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
LRTM2-205ENST00000542529 PRXQ9BXM0 1461 aa19.89■□□□□ 0.77
LRTM2-205ENST00000542529 RAPGEF2Q9Y4G8 1499 aa19.85■□□□□ 0.77
LRTM2-205ENST00000542529 NUP160Q12769 1436 aa19.84■□□□□ 0.77
LRTM2-205ENST00000542529 CEP170Q5SW79 1584 aa19.83■□□□□ 0.76
LRTM2-205ENST00000542529 DNAJC5Q9H3Z4 198 aa19.79■□□□□ 0.76
LRTM2-205ENST00000542529 CLASP1Q7Z460 1538 aa19.79■□□□□ 0.76
LRTM2-205ENST00000542529 KIF21BO75037 1637 aa19.73■□□□□ 0.75
LRTM2-205ENST00000542529 KIAA0586Q9BVV6 1533 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms