RNA–Protein interactions for RNA: ENST00000542411.5

CYB561A3-218, Transcript of cytochrome b561 family member A3, humanhuman

TSL 2

Gene CYB561A3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-218ENST00000542411 NISCHQ9Y2I1 1504 aa27.09■■□□□ 1.93
CYB561A3-218ENST00000542411 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
CYB561A3-218ENST00000542411 ABCC9O60706 1549 aa23.52■■□□□ 1.36
CYB561A3-218ENST00000542411 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
CYB561A3-218ENST00000542411 RB1CC1Q8TDY2 1594 aa22.63■■□□□ 1.21
CYB561A3-218ENST00000542411 NACADO15069 1562 aa22.62■■□□□ 1.21
CYB561A3-218ENST00000542411 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
CYB561A3-218ENST00000542411 MYO15BQ96JP2 1530 aa22.49■■□□□ 1.19
CYB561A3-218ENST00000542411 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
CYB561A3-218ENST00000542411 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.12
CYB561A3-218ENST00000542411 SCRIBQ14160 1630 aa21.91■■□□□ 1.1
CYB561A3-218ENST00000542411 UNC13AQ9UPW8 1703 aa21.89■■□□□ 1.09
CYB561A3-218ENST00000542411 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
CYB561A3-218ENST00000542411 SHROOM4Q9ULL8 1493 aa21.72■■□□□ 1.07
CYB561A3-218ENST00000542411 DNAJC5BQ9UF47 199 aa21.53■■□□□ 1.04
CYB561A3-218ENST00000542411 EIF4G1Q04637 1599 aaKnown RBP21.31■■□□□ 1
CYB561A3-218ENST00000542411 CC2D2AQ9P2K1 1620 aa21.21■□□□□ 0.99
CYB561A3-218ENST00000542411 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.98
CYB561A3-218ENST00000542411 BAZ1AQ9NRL2 1556 aaPredicted RBP21.01■□□□□ 0.95
CYB561A3-218ENST00000542411 SMARCA4P51532 1647 aa20.95■□□□□ 0.94
CYB561A3-218ENST00000542411 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
CYB561A3-218ENST00000542411 NCAPD3P42695 1498 aa20.89■□□□□ 0.94
CYB561A3-218ENST00000542411 SMARCA2P51531 1590 aa20.89■□□□□ 0.93
CYB561A3-218ENST00000542411 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
CYB561A3-218ENST00000542411 BAZ1BQ9UIG0 1483 aaKnown RBP20.76■□□□□ 0.91
CYB561A3-218ENST00000542411 PEG3Q9GZU2 1588 aa20.74■□□□□ 0.91
CYB561A3-218ENST00000542411 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
CYB561A3-218ENST00000542411 RSF1Q96T23 1441 aaPredicted RBP20.7■□□□□ 0.9
CYB561A3-218ENST00000542411 WIZO95785 1651 aa20.58■□□□□ 0.89
CYB561A3-218ENST00000542411 TOP2AP11388 1531 aaKnown RBP20.43■□□□□ 0.86
CYB561A3-218ENST00000542411 SUPT5HO00267 1087 aaKnown RBP20.37■□□□□ 0.85
CYB561A3-218ENST00000542411 ERCC6Q03468 1493 aa20.34■□□□□ 0.85
CYB561A3-218ENST00000542411 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
CYB561A3-218ENST00000542411 NESP48681 1621 aa20.31■□□□□ 0.84
CYB561A3-218ENST00000542411 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
CYB561A3-218ENST00000542411 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.84
CYB561A3-218ENST00000542411 CCDC88BA6NC98 1476 aa20.23■□□□□ 0.83
CYB561A3-218ENST00000542411 CFTRP13569 1480 aa20.17■□□□□ 0.82
CYB561A3-218ENST00000542411 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
CYB561A3-218ENST00000542411 CUX2O14529 1486 aa20.05■□□□□ 0.8
CYB561A3-218ENST00000542411 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
CYB561A3-218ENST00000542411 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
CYB561A3-218ENST00000542411 KIF21AQ7Z4S6 1674 aa19.98■□□□□ 0.79
CYB561A3-218ENST00000542411 THOC2Q8NI27 1593 aaKnown RBP19.91■□□□□ 0.78
CYB561A3-218ENST00000542411 WDR62O43379 1518 aa19.85■□□□□ 0.77
CYB561A3-218ENST00000542411 PRDM2Q13029 1718 aa19.83■□□□□ 0.77
CYB561A3-218ENST00000542411 ABCC8Q09428 1581 aa19.81■□□□□ 0.76
CYB561A3-218ENST00000542411 URB2Q14146 1524 aaKnown RBP19.8■□□□□ 0.76
CYB561A3-218ENST00000542411 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
CYB561A3-218ENST00000542411 DNMBPQ6XZF7 1577 aa19.68■□□□□ 0.74
CYB561A3-218ENST00000542411 IFT140Q96RY7 1462 aa19.63■□□□□ 0.73
CYB561A3-218ENST00000542411 SOGA1O94964 1423 aa19.57■□□□□ 0.72
CYB561A3-218ENST00000542411 CUX1P39880 1505 aa19.56■□□□□ 0.72
CYB561A3-218ENST00000542411 POLA1P09884 1462 aaPredicted RBP19.55■□□□□ 0.72
CYB561A3-218ENST00000542411 WRNQ14191 1432 aaPredicted RBP eCLIP19.55■□□□□ 0.72
CYB561A3-218ENST00000542411 FGD5Q6ZNL6 1462 aa19.52■□□□□ 0.72
CYB561A3-218ENST00000542411 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
CYB561A3-218ENST00000542411 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
CYB561A3-218ENST00000542411 DNAJC5Q9H3Z4 198 aa19.44■□□□□ 0.7
CYB561A3-218ENST00000542411 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
CYB561A3-218ENST00000542411 AQRO60306 1485 aaKnown RBP eCLIP19.43■□□□□ 0.7
CYB561A3-218ENST00000542411 TARBP1Q13395 1621 aaKnown RBP19.42■□□□□ 0.7
CYB561A3-218ENST00000542411 TOP2BQ02880 1626 aa19.4■□□□□ 0.7
CYB561A3-218ENST00000542411 OSCARQ8IYS5 282 aa19.37■□□□□ 0.69
CYB561A3-218ENST00000542411 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
CYB561A3-218ENST00000542411 BIVM-ERCC5R4GMW8 1640 aa19.35■□□□□ 0.69
CYB561A3-218ENST00000542411 FBLN2P98095 1184 aa19.34■□□□□ 0.69
CYB561A3-218ENST00000542411 EIF4G3O43432 1585 aaKnown RBP19.34■□□□□ 0.69
CYB561A3-218ENST00000542411 ABCA10Q8WWZ4 1543 aa19.34■□□□□ 0.69
CYB561A3-218ENST00000542411 WDR97A6NE52 1622 aa19.33■□□□□ 0.68
CYB561A3-218ENST00000542411 GRIN2BQ13224 1484 aa19.3■□□□□ 0.68
CYB561A3-218ENST00000542411 GAPVD1Q14C86 1478 aa19.3■□□□□ 0.68
CYB561A3-218ENST00000542411 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
CYB561A3-218ENST00000542411 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
CYB561A3-218ENST00000542411 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
CYB561A3-218ENST00000542411 MAGI1Q96QZ7 1491 aaPredicted RBP19.22■□□□□ 0.67
CYB561A3-218ENST00000542411 KIF27Q86VH2 1401 aa19.18■□□□□ 0.66
CYB561A3-218ENST00000542411 ABCA5Q8WWZ7 1642 aa19.16■□□□□ 0.66
CYB561A3-218ENST00000542411 SYNJ2O15056 1496 aa19.15■□□□□ 0.66
CYB561A3-218ENST00000542411 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
CYB561A3-218ENST00000542411 FHAD1B1AJZ9 1412 aa19.1■□□□□ 0.65
CYB561A3-218ENST00000542411 PBRM1Q86U86 1689 aa19.09■□□□□ 0.65
CYB561A3-218ENST00000542411 IGF1RP08069 1367 aa19.06■□□□□ 0.64
CYB561A3-218ENST00000542411 CHD1O14646 1710 aa19.03■□□□□ 0.64
CYB561A3-218ENST00000542411 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
CYB561A3-218ENST00000542411 ADAMTS12P58397 1594 aa18.99■□□□□ 0.63
CYB561A3-218ENST00000542411 CARMIL1Q5VZK9 1371 aa18.99■□□□□ 0.63
CYB561A3-218ENST00000542411 CHIC1Q5VXU3 224 aa18.99■□□□□ 0.63
CYB561A3-218ENST00000542411 NUP160Q12769 1436 aa18.91■□□□□ 0.62
CYB561A3-218ENST00000542411 CUL7Q14999 1698 aa18.91■□□□□ 0.62
CYB561A3-218ENST00000542411 RUSC2Q8N2Y8 1516 aa18.9■□□□□ 0.62
CYB561A3-218ENST00000542411 CLASP1Q7Z460 1538 aa18.89■□□□□ 0.61
CYB561A3-218ENST00000542411 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
CYB561A3-218ENST00000542411 ARHGEF11O15085 1522 aa18.87■□□□□ 0.61
CYB561A3-218ENST00000542411 CYB5RLQ6IPT4 315 aa18.86■□□□□ 0.61
CYB561A3-218ENST00000542411 JPH4Q96JJ6 628 aa18.86■□□□□ 0.61
CYB561A3-218ENST00000542411 EEA1Q15075 1411 aa18.85■□□□□ 0.61
CYB561A3-218ENST00000542411 RAPGEF2Q9Y4G8 1499 aa18.84■□□□□ 0.61
CYB561A3-218ENST00000542411 FAM9AQ8IZU1 332 aaPredicted RBP18.84■□□□□ 0.61
CYB561A3-218ENST00000542411 CEP170Q5SW79 1584 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms