RNA–Protein interactions for RNA: ENST00000541293.1

AP000943.2-202, humanhuman

TSL 5

Gene AP000943.2, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000943.2-202ENST00000541293 AEBP2Q6ZN18 517 aaPredicted RBP29.63■■■□□ 2.33
AP000943.2-202ENST00000541293 CHIC1Q5VXU3 224 aa28.46■■■□□ 2.15
AP000943.2-202ENST00000541293 NISCHQ9Y2I1 1504 aa28.23■■■□□ 2.11
AP000943.2-202ENST00000541293 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
AP000943.2-202ENST00000541293 PHF23Q9BUL5 403 aaPredicted RBP25.07■■□□□ 1.6
AP000943.2-202ENST00000541293 CCDC180Q9P1Z9 1646 aa24.77■■□□□ 1.56
AP000943.2-202ENST00000541293 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
AP000943.2-202ENST00000541293 FOXD1Q16676 465 aa23.56■■□□□ 1.36
AP000943.2-202ENST00000541293 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
AP000943.2-202ENST00000541293 ABCC9O60706 1549 aa23.3■■□□□ 1.32
AP000943.2-202ENST00000541293 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
AP000943.2-202ENST00000541293 MYO15BQ96JP2 1530 aa23.06■■□□□ 1.28
AP000943.2-202ENST00000541293 NACADO15069 1562 aa22.97■■□□□ 1.27
AP000943.2-202ENST00000541293 SHROOM4Q9ULL8 1493 aa22.93■■□□□ 1.26
AP000943.2-202ENST00000541293 PLPPR3Q6T4P5 718 aa22.93■■□□□ 1.26
AP000943.2-202ENST00000541293 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
AP000943.2-202ENST00000541293 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
AP000943.2-202ENST00000541293 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
AP000943.2-202ENST00000541293 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
AP000943.2-202ENST00000541293 PIAS4Q8N2W9 510 aaPredicted RBP22.15■■□□□ 1.14
AP000943.2-202ENST00000541293 ADRA2BP18089 450 aa22.14■■□□□ 1.13
AP000943.2-202ENST00000541293 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
AP000943.2-202ENST00000541293 MSH5O43196 834 aa22.1■■□□□ 1.13
AP000943.2-202ENST00000541293 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
AP000943.2-202ENST00000541293 CECR2Q9BXF3 1484 aa21.93■■□□□ 1.1
AP000943.2-202ENST00000541293 PABPN1Q86U42 306 aaKnown RBP eCLIP21.89■■□□□ 1.09
AP000943.2-202ENST00000541293 RSF1Q96T23 1441 aaPredicted RBP21.83■■□□□ 1.09
AP000943.2-202ENST00000541293 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
AP000943.2-202ENST00000541293 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
AP000943.2-202ENST00000541293 SMARCA4P51532 1647 aa21.77■■□□□ 1.08
AP000943.2-202ENST00000541293 WIZO95785 1651 aa21.72■■□□□ 1.07
AP000943.2-202ENST00000541293 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
AP000943.2-202ENST00000541293 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
AP000943.2-202ENST00000541293 TOP2AP11388 1531 aaKnown RBP21.43■■□□□ 1.02
AP000943.2-202ENST00000541293 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
AP000943.2-202ENST00000541293 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
AP000943.2-202ENST00000541293 BAZ1BQ9UIG0 1483 aaKnown RBP21.21■□□□□ 0.99
AP000943.2-202ENST00000541293 HMGXB3Q12766 1538 aa21.17■□□□□ 0.98
AP000943.2-202ENST00000541293 CC2D2AQ9P2K1 1620 aa21.16■□□□□ 0.98
AP000943.2-202ENST00000541293 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
AP000943.2-202ENST00000541293 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
AP000943.2-202ENST00000541293 POTEDQ86YR6 584 aa21.07■□□□□ 0.96
AP000943.2-202ENST00000541293 PRDM2Q13029 1718 aa20.86■□□□□ 0.93
AP000943.2-202ENST00000541293 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
AP000943.2-202ENST00000541293 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
AP000943.2-202ENST00000541293 CFTRP13569 1480 aa20.66■□□□□ 0.9
AP000943.2-202ENST00000541293 SYNJ1O43426 1573 aa20.57■□□□□ 0.88
AP000943.2-202ENST00000541293 CADPSQ9ULU8 1353 aa20.56■□□□□ 0.88
AP000943.2-202ENST00000541293 WRNQ14191 1432 aaPredicted RBP eCLIP20.54■□□□□ 0.88
AP000943.2-202ENST00000541293 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
AP000943.2-202ENST00000541293 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
AP000943.2-202ENST00000541293 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
AP000943.2-202ENST00000541293 NESP48681 1621 aa20.48■□□□□ 0.87
AP000943.2-202ENST00000541293 TOP2BQ02880 1626 aa20.48■□□□□ 0.87
AP000943.2-202ENST00000541293 SCAF1Q9H7N4 1312 aaKnown RBP20.46■□□□□ 0.87
AP000943.2-202ENST00000541293 CUX1P39880 1505 aa20.42■□□□□ 0.86
AP000943.2-202ENST00000541293 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
AP000943.2-202ENST00000541293 FANCD2Q9BXW9 1451 aa20.38■□□□□ 0.85
AP000943.2-202ENST00000541293 FAM9AQ8IZU1 332 aaPredicted RBP20.31■□□□□ 0.84
AP000943.2-202ENST00000541293 SOGA1O94964 1423 aa20.27■□□□□ 0.84
AP000943.2-202ENST00000541293 CEP164Q9UPV0 1460 aa20.27■□□□□ 0.84
AP000943.2-202ENST00000541293 DNMBPQ6XZF7 1577 aa20.26■□□□□ 0.83
AP000943.2-202ENST00000541293 RUSC2Q8N2Y8 1516 aa20.26■□□□□ 0.83
AP000943.2-202ENST00000541293 LOC105371045A0A1W2PR82 267 aa20.25■□□□□ 0.83
AP000943.2-202ENST00000541293 MAPK8IP2Q13387 824 aaPredicted RBP20.24■□□□□ 0.83
AP000943.2-202ENST00000541293 EEA1Q15075 1411 aa20.23■□□□□ 0.83
AP000943.2-202ENST00000541293 PDS5BQ9NTI5 1447 aa20.23■□□□□ 0.83
AP000943.2-202ENST00000541293 TOPBP1Q92547 1522 aa20.19■□□□□ 0.82
AP000943.2-202ENST00000541293 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
AP000943.2-202ENST00000541293 URB2Q14146 1524 aaKnown RBP20.17■□□□□ 0.82
AP000943.2-202ENST00000541293 DMRT2Q9Y5R5 561 aa20.14■□□□□ 0.81
AP000943.2-202ENST00000541293 WDR97A6NE52 1622 aa20.09■□□□□ 0.81
AP000943.2-202ENST00000541293 KIF21BO75037 1637 aa20.09■□□□□ 0.81
AP000943.2-202ENST00000541293 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.81
AP000943.2-202ENST00000541293 PPP4R3CPQ6ZMV5 832 aa20.07■□□□□ 0.8
AP000943.2-202ENST00000541293 POLA1P09884 1462 aaPredicted RBP20.06■□□□□ 0.8
AP000943.2-202ENST00000541293 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
AP000943.2-202ENST00000541293 EHMT2Q96KQ7 1210 aa20.02■□□□□ 0.8
AP000943.2-202ENST00000541293 KIF27Q86VH2 1401 aa20.02■□□□□ 0.79
AP000943.2-202ENST00000541293 CUX2O14529 1486 aa20■□□□□ 0.79
AP000943.2-202ENST00000541293 RAD54L2Q9Y4B4 1467 aa20■□□□□ 0.79
AP000943.2-202ENST00000541293 THOC2Q8NI27 1593 aaKnown RBP19.99■□□□□ 0.79
AP000943.2-202ENST00000541293 ABCA10Q8WWZ4 1543 aa19.98■□□□□ 0.79
AP000943.2-202ENST00000541293 GOLGA3Q08378 1498 aa19.98■□□□□ 0.79
AP000943.2-202ENST00000541293 WDR62O43379 1518 aa19.97■□□□□ 0.79
AP000943.2-202ENST00000541293 TARBP1Q13395 1621 aaKnown RBP19.96■□□□□ 0.79
AP000943.2-202ENST00000541293 ERCC6Q03468 1493 aa19.95■□□□□ 0.78
AP000943.2-202ENST00000541293 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
AP000943.2-202ENST00000541293 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
AP000943.2-202ENST00000541293 PRXQ9BXM0 1461 aa19.9■□□□□ 0.78
AP000943.2-202ENST00000541293 RAPGEF2Q9Y4G8 1499 aa19.89■□□□□ 0.77
AP000943.2-202ENST00000541293 TNIKQ9UKE5 1360 aa19.87■□□□□ 0.77
AP000943.2-202ENST00000541293 PBRM1Q86U86 1689 aa19.86■□□□□ 0.77
AP000943.2-202ENST00000541293 CUL7Q14999 1698 aa19.84■□□□□ 0.77
AP000943.2-202ENST00000541293 IGF1RP08069 1367 aa19.83■□□□□ 0.76
AP000943.2-202ENST00000541293 UBTFP17480 764 aaKnown RBP19.8■□□□□ 0.76
AP000943.2-202ENST00000541293 CEP162Q5TB80 1403 aa19.77■□□□□ 0.76
AP000943.2-202ENST00000541293 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
AP000943.2-202ENST00000541293 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
AP000943.2-202ENST00000541293 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms