RNA–Protein interactions for RNA: ENST00000540979.1

IPO8-206, Transcript of importin 8, humanhuman

TSL 5

Gene IPO8, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO8-206ENST00000540979 NISCHQ9Y2I1 1504 aa59.71■■■■■ 7.15
IPO8-206ENST00000540979 CCDC180Q9P1Z9 1646 aa52.99■■■■■ 6.07
IPO8-206ENST00000540979 ABCC9O60706 1549 aa51.13■■■■■ 5.77
IPO8-206ENST00000540979 ZCCHC6Q5VYS8 1495 aaKnown RBP49.88■■■■■ 5.58
IPO8-206ENST00000540979 NACADO15069 1562 aa49.63■■■■■ 5.54
IPO8-206ENST00000540979 MYO15BQ96JP2 1530 aa49.58■■■■■ 5.53
IPO8-206ENST00000540979 DCAF1Q9Y4B6 1507 aa49.54■■■■■ 5.52
IPO8-206ENST00000540979 RB1CC1Q8TDY2 1594 aa49.53■■■■■ 5.52
IPO8-206ENST00000540979 DCAF8L2P0C7V8 631 aa49.39■■■■■ 5.5
IPO8-206ENST00000540979 UNC13AQ9UPW8 1703 aa48.46■■■■■ 5.35
IPO8-206ENST00000540979 SCRIBQ14160 1630 aa48.23■■■■■ 5.31
IPO8-206ENST00000540979 BICRAQ9NZM4 1560 aa48.02■■■■■ 5.28
IPO8-206ENST00000540979 PABPN1Q86U42 306 aaKnown RBP eCLIP47.77■■■■■ 5.24
IPO8-206ENST00000540979 SHROOM4Q9ULL8 1493 aa47.68■■■■■ 5.22
IPO8-206ENST00000540979 EIF4G1Q04637 1599 aaKnown RBP46.7■■■■■ 5.07
IPO8-206ENST00000540979 DNAJC5BQ9UF47 199 aa46.4■■■■■ 5.02
IPO8-206ENST00000540979 CECR2Q9BXF3 1484 aa46.38■■■■■ 5.02
IPO8-206ENST00000540979 CC2D2AQ9P2K1 1620 aa46.36■■■■■ 5.01
IPO8-206ENST00000540979 BAZ1AQ9NRL2 1556 aaPredicted RBP46.27■■■■■ 5
IPO8-206ENST00000540979 SMARCA4P51532 1647 aa46.25■■■■■ 4.99
IPO8-206ENST00000540979 MROH2BQ7Z745 1585 aa45.99■■■■■ 4.95
IPO8-206ENST00000540979 PEG3Q9GZU2 1588 aa45.86■■■■■ 4.93
IPO8-206ENST00000540979 SMARCA2P51531 1590 aa45.85■■■■■ 4.93
IPO8-206ENST00000540979 ATAD2BQ9ULI0 1458 aa45.82■■■■■ 4.93
IPO8-206ENST00000540979 NCAPD3P42695 1498 aa45.75■■■■■ 4.91
IPO8-206ENST00000540979 RSF1Q96T23 1441 aaPredicted RBP45.64■■■■■ 4.9
IPO8-206ENST00000540979 HMGXB3Q12766 1538 aa45.63■■■■■ 4.9
IPO8-206ENST00000540979 WIZO95785 1651 aa45.53■■■■■ 4.88
IPO8-206ENST00000540979 BAZ1BQ9UIG0 1483 aaKnown RBP45.47■■■■■ 4.87
IPO8-206ENST00000540979 TOP2AP11388 1531 aaKnown RBP45.13■■■■■ 4.82
IPO8-206ENST00000540979 SUPT5HO00267 1087 aaKnown RBP44.67■■■■■ 4.74
IPO8-206ENST00000540979 CCDC88BA6NC98 1476 aa44.52■■■■■ 4.72
IPO8-206ENST00000540979 LAMC3Q9Y6N6 1575 aa44.5■■■■■ 4.71
IPO8-206ENST00000540979 NESP48681 1621 aa44.41■■■■■ 4.7
IPO8-206ENST00000540979 CADPSQ9ULU8 1353 aa44.4■■■■■ 4.7
IPO8-206ENST00000540979 CFTRP13569 1480 aa44.29■■■■■ 4.68
IPO8-206ENST00000540979 PDS5BQ9NTI5 1447 aa44.12■■■■■ 4.65
IPO8-206ENST00000540979 PRDM2Q13029 1718 aa44.12■■■■■ 4.65
IPO8-206ENST00000540979 ERCC6Q03468 1493 aa44.05■■■■■ 4.64
IPO8-206ENST00000540979 KIF21AQ7Z4S6 1674 aa44■■■■■ 4.63
IPO8-206ENST00000540979 FANCD2Q9BXW9 1451 aa43.89■■■■■ 4.62
IPO8-206ENST00000540979 CEP164Q9UPV0 1460 aa43.81■■■■■ 4.6
IPO8-206ENST00000540979 THOC2Q8NI27 1593 aaKnown RBP43.75■■■■■ 4.59
IPO8-206ENST00000540979 MRC2Q9UBG0 1479 aa43.65■■■■■ 4.58
IPO8-206ENST00000540979 WDR62O43379 1518 aa43.54■■■■■ 4.56
IPO8-206ENST00000540979 CUX2O14529 1486 aa43.51■■■■■ 4.56
IPO8-206ENST00000540979 URB2Q14146 1524 aaKnown RBP43.43■■■■■ 4.54
IPO8-206ENST00000540979 ABCC8Q09428 1581 aa43.34■■■■■ 4.53
IPO8-206ENST00000540979 DNMBPQ6XZF7 1577 aa43.3■■■■■ 4.52
IPO8-206ENST00000540979 TOPBP1Q92547 1522 aa43.27■■■■■ 4.52
IPO8-206ENST00000540979 CUX1P39880 1505 aa43.12■■■■■ 4.49
IPO8-206ENST00000540979 WRNQ14191 1432 aaPredicted RBP eCLIP43.02■■■■■ 4.48
IPO8-206ENST00000540979 BIVM-ERCC5R4GMW8 1640 aa42.97■■■■■ 4.47
IPO8-206ENST00000540979 TOP2BQ02880 1626 aa42.94■■■■■ 4.46
IPO8-206ENST00000540979 POLA1P09884 1462 aaPredicted RBP42.94■■■■■ 4.46
IPO8-206ENST00000540979 SYNJ1O43426 1573 aa42.91■■■■■ 4.46
IPO8-206ENST00000540979 FGD5Q6ZNL6 1462 aa42.89■■■■■ 4.46
IPO8-206ENST00000540979 IFT140Q96RY7 1462 aa42.88■■■■■ 4.46
IPO8-206ENST00000540979 TARBP1Q13395 1621 aaKnown RBP42.8■■■■■ 4.44
IPO8-206ENST00000540979 SOGA1O94964 1423 aa42.71■■■■■ 4.43
IPO8-206ENST00000540979 RAD54L2Q9Y4B4 1467 aa42.68■■■■■ 4.42
IPO8-206ENST00000540979 WDR97A6NE52 1622 aa42.63■■■■■ 4.41
IPO8-206ENST00000540979 ZNF608Q9ULD9 1512 aaPredicted RBP42.58■■■■■ 4.41
IPO8-206ENST00000540979 ABCA10Q8WWZ4 1543 aa42.55■■■■■ 4.4
IPO8-206ENST00000540979 EIF4G3O43432 1585 aaKnown RBP42.52■■■■■ 4.4
IPO8-206ENST00000540979 AQRO60306 1485 aaKnown RBP eCLIP42.38■■■■■ 4.38
IPO8-206ENST00000540979 ABCA5Q8WWZ7 1642 aa42.37■■■■■ 4.37
IPO8-206ENST00000540979 TDRD9Q8NDG6 1382 aaKnown RBP42.37■■■■■ 4.37
IPO8-206ENST00000540979 GAPVD1Q14C86 1478 aa42.26■■■■■ 4.36
IPO8-206ENST00000540979 TRIM41Q8WV44 630 aa42.23■■■■■ 4.35
IPO8-206ENST00000540979 PBRM1Q86U86 1689 aa42.22■■■■■ 4.35
IPO8-206ENST00000540979 GRIN2BQ13224 1484 aa42.21■■■■■ 4.35
IPO8-206ENST00000540979 KIF27Q86VH2 1401 aa42.09■■■■■ 4.33
IPO8-206ENST00000540979 MAGI1Q96QZ7 1491 aaPredicted RBP42.09■■■■■ 4.33
IPO8-206ENST00000540979 CHIC1Q5VXU3 224 aa42.07■■■■■ 4.33
IPO8-206ENST00000540979 ERICH3Q5RHP9 1530 aa42.06■■■■■ 4.32
IPO8-206ENST00000540979 SNAPC4Q5SXM2 1469 aa42.06■■■■■ 4.32
IPO8-206ENST00000540979 ADAMTS12P58397 1594 aa41.91■■■■■ 4.3
IPO8-206ENST00000540979 CHD1O14646 1710 aa41.89■■■■■ 4.3
IPO8-206ENST00000540979 SYNJ2O15056 1496 aa41.89■■■■■ 4.3
IPO8-206ENST00000540979 IGF1RP08069 1367 aa41.82■■■■■ 4.29
IPO8-206ENST00000540979 FHAD1B1AJZ9 1412 aa41.81■■■■■ 4.28
IPO8-206ENST00000540979 CUL7Q14999 1698 aa41.8■■■■■ 4.28
IPO8-206ENST00000540979 RUSC2Q8N2Y8 1516 aa41.79■■■■■ 4.28
IPO8-206ENST00000540979 CHMP7Q8WUX9 453 aaPredicted RBP41.7■■■■■ 4.27
IPO8-206ENST00000540979 EEA1Q15075 1411 aa41.68■■■■■ 4.26
IPO8-206ENST00000540979 GRIN2AQ12879 1464 aa41.67■■■■■ 4.26
IPO8-206ENST00000540979 FBLN2P98095 1184 aa41.66■■■■■ 4.26
IPO8-206ENST00000540979 OSCARQ8IYS5 282 aa41.66■■■■■ 4.26
IPO8-206ENST00000540979 CARMIL1Q5VZK9 1371 aa41.58■■■■■ 4.25
IPO8-206ENST00000540979 NUP160Q12769 1436 aa41.49■■■■■ 4.23
IPO8-206ENST00000540979 CLASP1Q7Z460 1538 aa41.47■■■■■ 4.23
IPO8-206ENST00000540979 CEP170Q5SW79 1584 aa41.46■■■■■ 4.23
IPO8-206ENST00000540979 DNAJC5Q9H3Z4 198 aa41.45■■■■■ 4.23
IPO8-206ENST00000540979 PRXQ9BXM0 1461 aa41.44■■■■■ 4.22
IPO8-206ENST00000540979 RAPGEF2Q9Y4G8 1499 aa41.43■■■■■ 4.22
IPO8-206ENST00000540979 CSRNP3Q8WYN3 585 aa41.41■■■■■ 4.22
IPO8-206ENST00000540979 FAM9AQ8IZU1 332 aaPredicted RBP41.24■■■■■ 4.19
IPO8-206ENST00000540979 KIF21BO75037 1637 aa41.22■■■■■ 4.19
IPO8-206ENST00000540979 KIAA0586Q9BVV6 1533 aa41.19■■■■■ 4.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms