RNA–Protein interactions for RNA: ENST00000540957.1

FERMT3-204, Transcript of fermitin family member 3, humanhuman

TSL 5

Gene FERMT3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-204ENST00000540957 NISCHQ9Y2I1 1504 aa51.14■■■■■ 5.78
FERMT3-204ENST00000540957 CCDC180Q9P1Z9 1646 aa45.34■■■■■ 4.85
FERMT3-204ENST00000540957 ABCC9O60706 1549 aa44.15■■■■■ 4.66
FERMT3-204ENST00000540957 DCAF8L2P0C7V8 631 aa42.69■■■■■ 4.42
FERMT3-204ENST00000540957 ZCCHC6Q5VYS8 1495 aaKnown RBP42.68■■■■■ 4.42
FERMT3-204ENST00000540957 NACADO15069 1562 aa42.58■■■■■ 4.41
FERMT3-204ENST00000540957 RB1CC1Q8TDY2 1594 aa42.58■■■■■ 4.41
FERMT3-204ENST00000540957 MYO15BQ96JP2 1530 aa42.4■■■■■ 4.38
FERMT3-204ENST00000540957 DCAF1Q9Y4B6 1507 aa42.32■■■■■ 4.37
FERMT3-204ENST00000540957 UNC13AQ9UPW8 1703 aa41.5■■■■■ 4.23
FERMT3-204ENST00000540957 SCRIBQ14160 1630 aa41.44■■■■■ 4.22
FERMT3-204ENST00000540957 PABPN1Q86U42 306 aaKnown RBP eCLIP41.3■■■■■ 4.2
FERMT3-204ENST00000540957 BICRAQ9NZM4 1560 aa41.21■■■■■ 4.19
FERMT3-204ENST00000540957 SHROOM4Q9ULL8 1493 aa40.89■■■■■ 4.14
FERMT3-204ENST00000540957 DNAJC5BQ9UF47 199 aa40.2■■■■■ 4.03
FERMT3-204ENST00000540957 EIF4G1Q04637 1599 aaKnown RBP40.16■■■■■ 4.02
FERMT3-204ENST00000540957 CC2D2AQ9P2K1 1620 aa39.92■■■■□ 3.98
FERMT3-204ENST00000540957 CECR2Q9BXF3 1484 aa39.8■■■■□ 3.96
FERMT3-204ENST00000540957 BAZ1AQ9NRL2 1556 aaPredicted RBP39.65■■■■□ 3.94
FERMT3-204ENST00000540957 SMARCA4P51532 1647 aa39.62■■■■□ 3.93
FERMT3-204ENST00000540957 MROH2BQ7Z745 1585 aa39.42■■■■□ 3.9
FERMT3-204ENST00000540957 ATAD2BQ9ULI0 1458 aa39.36■■■■□ 3.89
FERMT3-204ENST00000540957 SMARCA2P51531 1590 aa39.34■■■■□ 3.89
FERMT3-204ENST00000540957 NCAPD3P42695 1498 aa39.28■■■■□ 3.88
FERMT3-204ENST00000540957 PEG3Q9GZU2 1588 aa39.22■■■■□ 3.87
FERMT3-204ENST00000540957 HMGXB3Q12766 1538 aa39.12■■■■□ 3.85
FERMT3-204ENST00000540957 BAZ1BQ9UIG0 1483 aaKnown RBP39.09■■■■□ 3.85
FERMT3-204ENST00000540957 RSF1Q96T23 1441 aaPredicted RBP39.07■■■■□ 3.85
FERMT3-204ENST00000540957 WIZO95785 1651 aa38.99■■■■□ 3.83
FERMT3-204ENST00000540957 TOP2AP11388 1531 aaKnown RBP38.63■■■■□ 3.78
FERMT3-204ENST00000540957 SUPT5HO00267 1087 aaKnown RBP38.34■■■■□ 3.73
FERMT3-204ENST00000540957 NESP48681 1621 aa38.26■■■■□ 3.71
FERMT3-204ENST00000540957 LAMC3Q9Y6N6 1575 aa38.22■■■■□ 3.71
FERMT3-204ENST00000540957 CADPSQ9ULU8 1353 aa38.17■■■■□ 3.7
FERMT3-204ENST00000540957 CCDC88BA6NC98 1476 aa38.16■■■■□ 3.7
FERMT3-204ENST00000540957 ERCC6Q03468 1493 aa38.09■■■■□ 3.69
FERMT3-204ENST00000540957 CFTRP13569 1480 aa37.99■■■■□ 3.67
FERMT3-204ENST00000540957 PDS5BQ9NTI5 1447 aa37.99■■■■□ 3.67
FERMT3-204ENST00000540957 KIF21AQ7Z4S6 1674 aa37.79■■■■□ 3.64
FERMT3-204ENST00000540957 FANCD2Q9BXW9 1451 aa37.75■■■■□ 3.63
FERMT3-204ENST00000540957 CEP164Q9UPV0 1460 aa37.7■■■■□ 3.63
FERMT3-204ENST00000540957 PRDM2Q13029 1718 aa37.67■■■■□ 3.62
FERMT3-204ENST00000540957 THOC2Q8NI27 1593 aaKnown RBP37.61■■■■□ 3.61
FERMT3-204ENST00000540957 MRC2Q9UBG0 1479 aa37.58■■■■□ 3.61
FERMT3-204ENST00000540957 CUX2O14529 1486 aa37.53■■■■□ 3.6
FERMT3-204ENST00000540957 WDR62O43379 1518 aa37.42■■■■□ 3.58
FERMT3-204ENST00000540957 URB2Q14146 1524 aaKnown RBP37.32■■■■□ 3.57
FERMT3-204ENST00000540957 ABCC8Q09428 1581 aa37.19■■■■□ 3.54
FERMT3-204ENST00000540957 TOPBP1Q92547 1522 aa37.15■■■■□ 3.54
FERMT3-204ENST00000540957 DNMBPQ6XZF7 1577 aa37.15■■■■□ 3.54
FERMT3-204ENST00000540957 CUX1P39880 1505 aa36.97■■■■□ 3.51
FERMT3-204ENST00000540957 IFT140Q96RY7 1462 aa36.88■■■■□ 3.5
FERMT3-204ENST00000540957 WRNQ14191 1432 aaPredicted RBP eCLIP36.87■■■■□ 3.49
FERMT3-204ENST00000540957 POLA1P09884 1462 aaPredicted RBP36.86■■■■□ 3.49
FERMT3-204ENST00000540957 FGD5Q6ZNL6 1462 aa36.82■■■■□ 3.49
FERMT3-204ENST00000540957 SOGA1O94964 1423 aa36.73■■■■□ 3.47
FERMT3-204ENST00000540957 SYNJ1O43426 1573 aa36.73■■■■□ 3.47
FERMT3-204ENST00000540957 TOP2BQ02880 1626 aa36.72■■■■□ 3.47
FERMT3-204ENST00000540957 BIVM-ERCC5R4GMW8 1640 aa36.7■■■■□ 3.47
FERMT3-204ENST00000540957 TARBP1Q13395 1621 aaKnown RBP36.7■■■■□ 3.47
FERMT3-204ENST00000540957 RAD54L2Q9Y4B4 1467 aa36.69■■■■□ 3.46
FERMT3-204ENST00000540957 ZNF608Q9ULD9 1512 aaPredicted RBP36.66■■■■□ 3.46
FERMT3-204ENST00000540957 EIF4G3O43432 1585 aaKnown RBP36.55■■■■□ 3.44
FERMT3-204ENST00000540957 AQRO60306 1485 aaKnown RBP eCLIP36.5■■■■□ 3.432e-8■■■■■ 35.2
FERMT3-204ENST00000540957 TDRD9Q8NDG6 1382 aaKnown RBP36.49■■■■□ 3.43
FERMT3-204ENST00000540957 ABCA10Q8WWZ4 1543 aa36.47■■■■□ 3.43
FERMT3-204ENST00000540957 WDR97A6NE52 1622 aa36.46■■■■□ 3.43
FERMT3-204ENST00000540957 GAPVD1Q14C86 1478 aa36.31■■■■□ 3.4
FERMT3-204ENST00000540957 ABCA5Q8WWZ7 1642 aa36.29■■■■□ 3.4
FERMT3-204ENST00000540957 GRIN2BQ13224 1484 aa36.28■■■■□ 3.4
FERMT3-204ENST00000540957 TRIM41Q8WV44 630 aa36.21■■■■□ 3.39
FERMT3-204ENST00000540957 SNAPC4Q5SXM2 1469 aa36.2■■■■□ 3.39
FERMT3-204ENST00000540957 PBRM1Q86U86 1689 aa36.18■■■■□ 3.38
FERMT3-204ENST00000540957 MAGI1Q96QZ7 1491 aaPredicted RBP36.15■■■■□ 3.38
FERMT3-204ENST00000540957 KIF27Q86VH2 1401 aa36.09■■■■□ 3.37
FERMT3-204ENST00000540957 FBLN2P98095 1184 aa36.07■■■■□ 3.36
FERMT3-204ENST00000540957 ERICH3Q5RHP9 1530 aa36.04■■■■□ 3.36
FERMT3-204ENST00000540957 OSCARQ8IYS5 282 aa36.04■■■■□ 3.36
FERMT3-204ENST00000540957 DNAJC5Q9H3Z4 198 aa36.04■■■■□ 3.36
FERMT3-204ENST00000540957 SYNJ2O15056 1496 aa36.01■■■■□ 3.36
FERMT3-204ENST00000540957 CHMP7Q8WUX9 453 aaPredicted RBP36■■■■□ 3.35
FERMT3-204ENST00000540957 CHD1O14646 1710 aa35.99■■■■□ 3.35
FERMT3-204ENST00000540957 ADAMTS12P58397 1594 aa35.95■■■■□ 3.35
FERMT3-204ENST00000540957 FHAD1B1AJZ9 1412 aa35.91■■■■□ 3.34
FERMT3-204ENST00000540957 CHIC1Q5VXU3 224 aa35.88■■■■□ 3.33
FERMT3-204ENST00000540957 IGF1RP08069 1367 aa35.86■■■■□ 3.33
FERMT3-204ENST00000540957 GRIN2AQ12879 1464 aa35.8■■■■□ 3.32
FERMT3-204ENST00000540957 CUL7Q14999 1698 aa35.78■■■■□ 3.32
FERMT3-204ENST00000540957 RUSC2Q8N2Y8 1516 aa35.78■■■■□ 3.32
FERMT3-204ENST00000540957 CARMIL1Q5VZK9 1371 aa35.68■■■■□ 3.3
FERMT3-204ENST00000540957 CLASP1Q7Z460 1538 aa35.63■■■■□ 3.29
FERMT3-204ENST00000540957 NUP160Q12769 1436 aa35.62■■■■□ 3.29
FERMT3-204ENST00000540957 CEP170Q5SW79 1584 aa35.59■■■■□ 3.29
FERMT3-204ENST00000540957 EEA1Q15075 1411 aa35.57■■■■□ 3.29
FERMT3-204ENST00000540957 RAPGEF2Q9Y4G8 1499 aa35.51■■■■□ 3.28
FERMT3-204ENST00000540957 CSRNP3Q8WYN3 585 aa35.47■■■■□ 3.27
FERMT3-204ENST00000540957 FAM9AQ8IZU1 332 aaPredicted RBP35.45■■■■□ 3.27
FERMT3-204ENST00000540957 ARHGEF11O15085 1522 aa35.44■■■■□ 3.26
FERMT3-204ENST00000540957 PRXQ9BXM0 1461 aa35.42■■■■□ 3.26
FERMT3-204ENST00000540957 RIMBP3CA6NJZ7 1639 aa35.39■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms