RNA–Protein interactions for RNA: ENST00000540898.1

FOXO3-203, Transcript of forkhead box O3, humanhuman

TSL 1 (best) BASIC

Gene FOXO3, Length 2,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXO3-203ENST00000540898 NISCHQ9Y2I1 1504 aa22.64■■□□□ 1.22
FOXO3-203ENST00000540898 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
FOXO3-203ENST00000540898 ZCCHC6Q5VYS8 1495 aaKnown RBP19.04■□□□□ 0.64
FOXO3-203ENST00000540898 DCAF8L2P0C7V8 631 aa19.01■□□□□ 0.63
FOXO3-203ENST00000540898 SHROOM4Q9ULL8 1493 aa19.01■□□□□ 0.63
FOXO3-203ENST00000540898 ABCC9O60706 1549 aa18.67■□□□□ 0.58
FOXO3-203ENST00000540898 DCAF1Q9Y4B6 1507 aa18.5■□□□□ 0.55
FOXO3-203ENST00000540898 SUPT5HO00267 1087 aaKnown RBP18.31■□□□□ 0.52
FOXO3-203ENST00000540898 SCRIBQ14160 1630 aa18.27■□□□□ 0.51
FOXO3-203ENST00000540898 MYO15BQ96JP2 1530 aa18.16■□□□□ 0.5
FOXO3-203ENST00000540898 NACADO15069 1562 aa18.13■□□□□ 0.49
FOXO3-203ENST00000540898 RB1CC1Q8TDY2 1594 aa17.98■□□□□ 0.47
FOXO3-203ENST00000540898 UNC13AQ9UPW8 1703 aa17.8■□□□□ 0.44
FOXO3-203ENST00000540898 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
FOXO3-203ENST00000540898 PABPN1Q86U42 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
FOXO3-203ENST00000540898 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
FOXO3-203ENST00000540898 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.41
FOXO3-203ENST00000540898 BICRAQ9NZM4 1560 aa17.61■□□□□ 0.41
FOXO3-203ENST00000540898 WIZO95785 1651 aa17.52■□□□□ 0.39
FOXO3-203ENST00000540898 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
FOXO3-203ENST00000540898 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
FOXO3-203ENST00000540898 SMARCA4P51532 1647 aa17.38■□□□□ 0.37
FOXO3-203ENST00000540898 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
FOXO3-203ENST00000540898 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
FOXO3-203ENST00000540898 SMARCA2P51531 1590 aa17.08■□□□□ 0.33
FOXO3-203ENST00000540898 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
FOXO3-203ENST00000540898 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.32
FOXO3-203ENST00000540898 PEG3Q9GZU2 1588 aa17.02■□□□□ 0.32
FOXO3-203ENST00000540898 TRIM41Q8WV44 630 aa17.02■□□□□ 0.32
FOXO3-203ENST00000540898 LOC105371045A0A1W2PR82 267 aa17.02■□□□□ 0.31
FOXO3-203ENST00000540898 BAZ1BQ9UIG0 1483 aaKnown RBP16.97■□□□□ 0.31
FOXO3-203ENST00000540898 FAM9AQ8IZU1 332 aaPredicted RBP16.97■□□□□ 0.31
FOXO3-203ENST00000540898 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
FOXO3-203ENST00000540898 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
FOXO3-203ENST00000540898 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
FOXO3-203ENST00000540898 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
FOXO3-203ENST00000540898 HMGXB3Q12766 1538 aa16.74■□□□□ 0.27
FOXO3-203ENST00000540898 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
FOXO3-203ENST00000540898 SOGA1O94964 1423 aa16.65■□□□□ 0.26
FOXO3-203ENST00000540898 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
FOXO3-203ENST00000540898 RUSC2Q8N2Y8 1516 aa16.64■□□□□ 0.25
FOXO3-203ENST00000540898 WRNQ14191 1432 aaPredicted RBP eCLIP16.63■□□□□ 0.25
FOXO3-203ENST00000540898 CFTRP13569 1480 aa16.53■□□□□ 0.24
FOXO3-203ENST00000540898 NESP48681 1621 aa16.48■□□□□ 0.23
FOXO3-203ENST00000540898 CADPSQ9ULU8 1353 aa16.46■□□□□ 0.22
FOXO3-203ENST00000540898 CUX1P39880 1505 aa16.45■□□□□ 0.22
FOXO3-203ENST00000540898 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
FOXO3-203ENST00000540898 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
FOXO3-203ENST00000540898 BIVM-ERCC5R4GMW8 1640 aa16.36■□□□□ 0.21
FOXO3-203ENST00000540898 PCGF6Q9BYE7 350 aa16.35■□□□□ 0.21
FOXO3-203ENST00000540898 PPARGC1BQ86YN6 1023 aaKnown RBP16.34■□□□□ 0.21
FOXO3-203ENST00000540898 PRDM2Q13029 1718 aa16.33■□□□□ 0.2
FOXO3-203ENST00000540898 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
FOXO3-203ENST00000540898 UBTFP17480 764 aaKnown RBP16.31■□□□□ 0.2
FOXO3-203ENST00000540898 HRCP23327 699 aa16.3■□□□□ 0.2
FOXO3-203ENST00000540898 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.19
FOXO3-203ENST00000540898 EEA1Q15075 1411 aa16.26■□□□□ 0.19
FOXO3-203ENST00000540898 RAPGEF2Q9Y4G8 1499 aa16.25■□□□□ 0.19
FOXO3-203ENST00000540898 CEP162Q5TB80 1403 aa16.23■□□□□ 0.19
FOXO3-203ENST00000540898 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
FOXO3-203ENST00000540898 GOLGA3Q08378 1498 aa16.21■□□□□ 0.19
FOXO3-203ENST00000540898 TTBK1Q5TCY1 1321 aaPredicted RBP16.19■□□□□ 0.18
FOXO3-203ENST00000540898 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
FOXO3-203ENST00000540898 TNIKQ9UKE5 1360 aa16.18■□□□□ 0.18
FOXO3-203ENST00000540898 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
FOXO3-203ENST00000540898 CUX2O14529 1486 aa16.17■□□□□ 0.18
FOXO3-203ENST00000540898 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
FOXO3-203ENST00000540898 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
FOXO3-203ENST00000540898 KIF21AQ7Z4S6 1674 aa16.15■□□□□ 0.18
FOXO3-203ENST00000540898 KIF21BO75037 1637 aa16.15■□□□□ 0.18
FOXO3-203ENST00000540898 URB2Q14146 1524 aaKnown RBP16.15■□□□□ 0.18
FOXO3-203ENST00000540898 TOPBP1Q92547 1522 aa16.15■□□□□ 0.18
FOXO3-203ENST00000540898 KIF27Q86VH2 1401 aa16.14■□□□□ 0.17
FOXO3-203ENST00000540898 POLA1P09884 1462 aaPredicted RBP16.12■□□□□ 0.17
FOXO3-203ENST00000540898 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
FOXO3-203ENST00000540898 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
FOXO3-203ENST00000540898 IGF1RP08069 1367 aa16.07■□□□□ 0.16
FOXO3-203ENST00000540898 PDS5BQ9NTI5 1447 aa16.07■□□□□ 0.16
FOXO3-203ENST00000540898 TRIM26Q12899 539 aaPredicted RBP16.07■□□□□ 0.16
FOXO3-203ENST00000540898 CLIP1P30622 1438 aa16.03■□□□□ 0.16
FOXO3-203ENST00000540898 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.15
FOXO3-203ENST00000540898 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
FOXO3-203ENST00000540898 ABCA10Q8WWZ4 1543 aa15.98■□□□□ 0.15
FOXO3-203ENST00000540898 CARMIL1Q5VZK9 1371 aa15.97■□□□□ 0.15
FOXO3-203ENST00000540898 WDR97A6NE52 1622 aa15.91■□□□□ 0.14
FOXO3-203ENST00000540898 MRC2Q9UBG0 1479 aa15.9■□□□□ 0.14
FOXO3-203ENST00000540898 ARAP1Q96P48 1450 aa15.89■□□□□ 0.13
FOXO3-203ENST00000540898 TARBP1Q13395 1621 aaKnown RBP15.88■□□□□ 0.13
FOXO3-203ENST00000540898 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.13
FOXO3-203ENST00000540898 ERCC6Q03468 1493 aa15.87■□□□□ 0.13
FOXO3-203ENST00000540898 VPS8Q8N3P4 1428 aa15.86■□□□□ 0.13
FOXO3-203ENST00000540898 P3H3Q8IVL6 736 aa15.86■□□□□ 0.13
FOXO3-203ENST00000540898 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
FOXO3-203ENST00000540898 GAPVD1Q14C86 1478 aa15.85■□□□□ 0.13
FOXO3-203ENST00000540898 ARHGAP35Q9NRY4 1499 aa15.85■□□□□ 0.13
FOXO3-203ENST00000540898 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
FOXO3-203ENST00000540898 WDR62O43379 1518 aa15.79■□□□□ 0.12
FOXO3-203ENST00000540898 KANK4Q5T7N3 995 aaPredicted RBP15.78■□□□□ 0.12
FOXO3-203ENST00000540898 THOC2Q8NI27 1593 aaKnown RBP15.76■□□□□ 0.11
FOXO3-203ENST00000540898 CUL7Q14999 1698 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms