RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 NISCHQ9Y2I1 1504 aa35.71■■■■□ 3.31
MDM1-210ENST00000540418 CCDC180Q9P1Z9 1646 aa31.57■■■□□ 2.64
MDM1-210ENST00000540418 ABCC9O60706 1549 aa30.7■■■□□ 2.5
MDM1-210ENST00000540418 DCAF8L2P0C7V8 631 aa29.8■■■□□ 2.36
MDM1-210ENST00000540418 ZCCHC6Q5VYS8 1495 aaKnown RBP29.78■■■□□ 2.36
MDM1-210ENST00000540418 NACADO15069 1562 aa29.67■■■□□ 2.34
MDM1-210ENST00000540418 RB1CC1Q8TDY2 1594 aa29.63■■■□□ 2.33
MDM1-210ENST00000540418 MYO15BQ96JP2 1530 aa29.59■■■□□ 2.33
MDM1-210ENST00000540418 DCAF1Q9Y4B6 1507 aa29.55■■■□□ 2.32
MDM1-210ENST00000540418 UNC13AQ9UPW8 1703 aa28.88■■■□□ 2.21
MDM1-210ENST00000540418 SCRIBQ14160 1630 aa28.84■■■□□ 2.21
MDM1-210ENST00000540418 PABPN1Q86U42 306 aaKnown RBP eCLIP28.78■■■□□ 2.2
MDM1-210ENST00000540418 BICRAQ9NZM4 1560 aa28.71■■■□□ 2.19
MDM1-210ENST00000540418 SHROOM4Q9ULL8 1493 aa28.45■■■□□ 2.14
MDM1-210ENST00000540418 DNAJC5BQ9UF47 199 aa27.99■■■□□ 2.07
MDM1-210ENST00000540418 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
MDM1-210ENST00000540418 CECR2Q9BXF3 1484 aa27.79■■■□□ 2.04
MDM1-210ENST00000540418 CC2D2AQ9P2K1 1620 aa27.76■■■□□ 2.03
MDM1-210ENST00000540418 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
MDM1-210ENST00000540418 SMARCA4P51532 1647 aa27.61■■■□□ 2.01
MDM1-210ENST00000540418 MROH2BQ7Z745 1585 aa27.51■■■□□ 2
MDM1-210ENST00000540418 ATAD2BQ9ULI0 1458 aa27.45■■□□□ 1.98
MDM1-210ENST00000540418 SMARCA2P51531 1590 aa27.41■■□□□ 1.98
MDM1-210ENST00000540418 NCAPD3P42695 1498 aa27.4■■□□□ 1.98
MDM1-210ENST00000540418 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
MDM1-210ENST00000540418 RSF1Q96T23 1441 aaPredicted RBP27.32■■□□□ 1.96
MDM1-210ENST00000540418 HMGXB3Q12766 1538 aa27.25■■□□□ 1.95
MDM1-210ENST00000540418 BAZ1BQ9UIG0 1483 aaKnown RBP27.22■■□□□ 1.95
MDM1-210ENST00000540418 WIZO95785 1651 aa27.21■■□□□ 1.95
MDM1-210ENST00000540418 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
MDM1-210ENST00000540418 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
MDM1-210ENST00000540418 CCDC88BA6NC98 1476 aa26.66■■□□□ 1.86
MDM1-210ENST00000540418 NESP48681 1621 aa26.64■■□□□ 1.85
MDM1-210ENST00000540418 CADPSQ9ULU8 1353 aa26.63■■□□□ 1.85
MDM1-210ENST00000540418 LAMC3Q9Y6N6 1575 aa26.6■■□□□ 1.85
MDM1-210ENST00000540418 CFTRP13569 1480 aa26.51■■□□□ 1.83
MDM1-210ENST00000540418 PDS5BQ9NTI5 1447 aa26.46■■□□□ 1.83
MDM1-210ENST00000540418 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
MDM1-210ENST00000540418 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
MDM1-210ENST00000540418 KIF21AQ7Z4S6 1674 aa26.27■■□□□ 1.8
MDM1-210ENST00000540418 CEP164Q9UPV0 1460 aa26.23■■□□□ 1.79
MDM1-210ENST00000540418 PRDM2Q13029 1718 aa26.22■■□□□ 1.79
MDM1-210ENST00000540418 MRC2Q9UBG0 1479 aa26.14■■□□□ 1.77
MDM1-210ENST00000540418 THOC2Q8NI27 1593 aaKnown RBP26.13■■□□□ 1.77
MDM1-210ENST00000540418 CUX2O14529 1486 aa26.07■■□□□ 1.76
MDM1-210ENST00000540418 WDR62O43379 1518 aa26.03■■□□□ 1.76
MDM1-210ENST00000540418 URB2Q14146 1524 aaKnown RBP26.01■■□□□ 1.75
MDM1-210ENST00000540418 ABCC8Q09428 1581 aa25.94■■□□□ 1.74
MDM1-210ENST00000540418 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
MDM1-210ENST00000540418 DNMBPQ6XZF7 1577 aa25.87■■□□□ 1.73
MDM1-210ENST00000540418 CUX1P39880 1505 aa25.79■■□□□ 1.72
MDM1-210ENST00000540418 WRNQ14191 1432 aaPredicted RBP eCLIP25.75■■□□□ 1.71
MDM1-210ENST00000540418 POLA1P09884 1462 aaPredicted RBP25.69■■□□□ 1.7
MDM1-210ENST00000540418 IFT140Q96RY7 1462 aa25.68■■□□□ 1.7
MDM1-210ENST00000540418 FGD5Q6ZNL6 1462 aa25.67■■□□□ 1.7
MDM1-210ENST00000540418 SOGA1O94964 1423 aa25.64■■□□□ 1.69
MDM1-210ENST00000540418 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
MDM1-210ENST00000540418 SYNJ1O43426 1573 aa25.63■■□□□ 1.69
MDM1-210ENST00000540418 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
MDM1-210ENST00000540418 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
MDM1-210ENST00000540418 TARBP1Q13395 1621 aaKnown RBP25.57■■□□□ 1.68
MDM1-210ENST00000540418 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
MDM1-210ENST00000540418 TDRD9Q8NDG6 1382 aaKnown RBP25.45■■□□□ 1.67
MDM1-210ENST00000540418 AQRO60306 1485 aaKnown RBP eCLIP25.45■■□□□ 1.66
MDM1-210ENST00000540418 ABCA10Q8WWZ4 1543 aa25.44■■□□□ 1.66
MDM1-210ENST00000540418 EIF4G3O43432 1585 aaKnown RBP25.4■■□□□ 1.66
MDM1-210ENST00000540418 WDR97A6NE52 1622 aa25.38■■□□□ 1.65
MDM1-210ENST00000540418 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
MDM1-210ENST00000540418 GAPVD1Q14C86 1478 aa25.32■■□□□ 1.64
MDM1-210ENST00000540418 GRIN2BQ13224 1484 aa25.28■■□□□ 1.64
MDM1-210ENST00000540418 ABCA5Q8WWZ7 1642 aa25.28■■□□□ 1.64
MDM1-210ENST00000540418 CHIC1Q5VXU3 224 aa25.23■■□□□ 1.63
MDM1-210ENST00000540418 KIF27Q86VH2 1401 aa25.2■■□□□ 1.62
MDM1-210ENST00000540418 SNAPC4Q5SXM2 1469 aa25.19■■□□□ 1.62
MDM1-210ENST00000540418 MAGI1Q96QZ7 1491 aaPredicted RBP25.18■■□□□ 1.62
MDM1-210ENST00000540418 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
MDM1-210ENST00000540418 ERICH3Q5RHP9 1530 aa25.14■■□□□ 1.62
MDM1-210ENST00000540418 FBLN2P98095 1184 aa25.12■■□□□ 1.61
MDM1-210ENST00000540418 OSCARQ8IYS5 282 aa25.1■■□□□ 1.61
MDM1-210ENST00000540418 CHMP7Q8WUX9 453 aaPredicted RBP25.1■■□□□ 1.61
MDM1-210ENST00000540418 IGF1RP08069 1367 aa25.09■■□□□ 1.61
MDM1-210ENST00000540418 SYNJ2O15056 1496 aa25.08■■□□□ 1.61
MDM1-210ENST00000540418 FHAD1B1AJZ9 1412 aa25.05■■□□□ 1.6
MDM1-210ENST00000540418 RUSC2Q8N2Y8 1516 aa25.04■■□□□ 1.6
MDM1-210ENST00000540418 DNAJC5Q9H3Z4 198 aa25.02■■□□□ 1.6
MDM1-210ENST00000540418 ADAMTS12P58397 1594 aa25.01■■□□□ 1.59
MDM1-210ENST00000540418 CHD1O14646 1710 aa25.01■■□□□ 1.59
MDM1-210ENST00000540418 GRIN2AQ12879 1464 aa24.94■■□□□ 1.58
MDM1-210ENST00000540418 CARMIL1Q5VZK9 1371 aa24.94■■□□□ 1.58
MDM1-210ENST00000540418 CUL7Q14999 1698 aa24.93■■□□□ 1.58
MDM1-210ENST00000540418 EEA1Q15075 1411 aa24.89■■□□□ 1.57
MDM1-210ENST00000540418 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
MDM1-210ENST00000540418 NUP160Q12769 1436 aa24.83■■□□□ 1.56
MDM1-210ENST00000540418 FAM9AQ8IZU1 332 aaPredicted RBP24.82■■□□□ 1.56
MDM1-210ENST00000540418 RAPGEF2Q9Y4G8 1499 aa24.8■■□□□ 1.56
MDM1-210ENST00000540418 CLASP1Q7Z460 1538 aa24.79■■□□□ 1.56
MDM1-210ENST00000540418 CEP170Q5SW79 1584 aa24.78■■□□□ 1.56
MDM1-210ENST00000540418 PRXQ9BXM0 1461 aa24.77■■□□□ 1.56
MDM1-210ENST00000540418 KIAA0586Q9BVV6 1533 aa24.67■■□□□ 1.54
MDM1-210ENST00000540418 JPH4Q96JJ6 628 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms