RNA–Protein interactions for RNA: ENST00000540395.1

MEPE-208, Transcript of matrix extracellular phosphoglycoprotein, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene MEPE, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEPE-208ENST00000540395 NISCHQ9Y2I1 1504 aa16.65■□□□□ 0.26
MEPE-208ENST00000540395 CHIC1Q5VXU3 224 aa14.84□□□□□ -0.03
MEPE-208ENST00000540395 CCDC180Q9P1Z9 1646 aa14.5□□□□□ -0.09
MEPE-208ENST00000540395 AEBP2Q6ZN18 517 aaPredicted RBP14.35□□□□□ -0.11
MEPE-208ENST00000540395 ABCC9O60706 1549 aa14.05□□□□□ -0.16
MEPE-208ENST00000540395 DCAF8L2P0C7V8 631 aa13.99□□□□□ -0.17
MEPE-208ENST00000540395 ZCCHC6Q5VYS8 1495 aaKnown RBP13.93□□□□□ -0.18
MEPE-208ENST00000540395 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
MEPE-208ENST00000540395 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
MEPE-208ENST00000540395 NACADO15069 1562 aa13.6□□□□□ -0.23
MEPE-208ENST00000540395 MYO15BQ96JP2 1530 aa13.58□□□□□ -0.23
MEPE-208ENST00000540395 RB1CC1Q8TDY2 1594 aa13.53□□□□□ -0.24
MEPE-208ENST00000540395 SCRIBQ14160 1630 aa13.44□□□□□ -0.26
MEPE-208ENST00000540395 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
MEPE-208ENST00000540395 UNC13AQ9UPW8 1703 aa13.24□□□□□ -0.29
MEPE-208ENST00000540395 PHF23Q9BUL5 403 aaPredicted RBP13.21□□□□□ -0.29
MEPE-208ENST00000540395 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
MEPE-208ENST00000540395 CECR2Q9BXF3 1484 aa13.03□□□□□ -0.32
MEPE-208ENST00000540395 SUPT5HO00267 1087 aaKnown RBP13.01□□□□□ -0.33
MEPE-208ENST00000540395 MROH2BQ7Z745 1585 aa12.9□□□□□ -0.35
MEPE-208ENST00000540395 RSF1Q96T23 1441 aaPredicted RBP12.89□□□□□ -0.35
MEPE-208ENST00000540395 BAZ1AQ9NRL2 1556 aaPredicted RBP12.84□□□□□ -0.35
MEPE-208ENST00000540395 SMARCA4P51532 1647 aa12.82□□□□□ -0.36
MEPE-208ENST00000540395 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.36
MEPE-208ENST00000540395 WIZO95785 1651 aa12.77□□□□□ -0.37
MEPE-208ENST00000540395 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
MEPE-208ENST00000540395 CC2D2AQ9P2K1 1620 aa12.64□□□□□ -0.39
MEPE-208ENST00000540395 DNAJC5BQ9UF47 199 aa12.64□□□□□ -0.39
MEPE-208ENST00000540395 PEG3Q9GZU2 1588 aa12.63□□□□□ -0.39
MEPE-208ENST00000540395 SMARCA2P51531 1590 aa12.62□□□□□ -0.39
MEPE-208ENST00000540395 BAZ1BQ9UIG0 1483 aaKnown RBP12.6□□□□□ -0.39
MEPE-208ENST00000540395 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
MEPE-208ENST00000540395 TOP2AP11388 1531 aaKnown RBP12.59□□□□□ -0.39
MEPE-208ENST00000540395 CCDC88BA6NC98 1476 aa12.52□□□□□ -0.41
MEPE-208ENST00000540395 HMGXB3Q12766 1538 aa12.51□□□□□ -0.41
MEPE-208ENST00000540395 PLPPR3Q6T4P5 718 aa12.44□□□□□ -0.42
MEPE-208ENST00000540395 CADPSQ9ULU8 1353 aa12.29□□□□□ -0.44
MEPE-208ENST00000540395 NESP48681 1621 aa12.28□□□□□ -0.44
MEPE-208ENST00000540395 CFTRP13569 1480 aa12.27□□□□□ -0.45
MEPE-208ENST00000540395 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
MEPE-208ENST00000540395 ABCC8Q09428 1581 aa12.21□□□□□ -0.46
MEPE-208ENST00000540395 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
MEPE-208ENST00000540395 LAMC3Q9Y6N6 1575 aa12.15□□□□□ -0.46
MEPE-208ENST00000540395 FANCD2Q9BXW9 1451 aa12.15□□□□□ -0.46
MEPE-208ENST00000540395 WRNQ14191 1432 aaPredicted RBP eCLIP12.13□□□□□ -0.47
MEPE-208ENST00000540395 PDS5BQ9NTI5 1447 aa12.11□□□□□ -0.47
MEPE-208ENST00000540395 PRDM2Q13029 1718 aa12.08□□□□□ -0.48
MEPE-208ENST00000540395 SYNJ1O43426 1573 aa12.07□□□□□ -0.48
MEPE-208ENST00000540395 CEP164Q9UPV0 1460 aa12.06□□□□□ -0.48
MEPE-208ENST00000540395 CUX1P39880 1505 aa12.06□□□□□ -0.48
MEPE-208ENST00000540395 KIF21AQ7Z4S6 1674 aa12.04□□□□□ -0.48
MEPE-208ENST00000540395 FAM9AQ8IZU1 332 aaPredicted RBP12.04□□□□□ -0.48
MEPE-208ENST00000540395 ERCC6Q03468 1493 aa12.03□□□□□ -0.48
MEPE-208ENST00000540395 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
MEPE-208ENST00000540395 TOP2BQ02880 1626 aa12□□□□□ -0.49
MEPE-208ENST00000540395 TOPBP1Q92547 1522 aa11.99□□□□□ -0.49
MEPE-208ENST00000540395 SOGA1O94964 1423 aa11.97□□□□□ -0.49
MEPE-208ENST00000540395 BIVM-ERCC5R4GMW8 1640 aa11.96□□□□□ -0.49
MEPE-208ENST00000540395 MRC2Q9UBG0 1479 aa11.96□□□□□ -0.49
MEPE-208ENST00000540395 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.5
MEPE-208ENST00000540395 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
MEPE-208ENST00000540395 SENP3Q9H4L4 574 aaPredicted RBP11.95□□□□□ -0.5
MEPE-208ENST00000540395 RUSC2Q8N2Y8 1516 aa11.94□□□□□ -0.5
MEPE-208ENST00000540395 RAD54L2Q9Y4B4 1467 aa11.93□□□□□ -0.5
MEPE-208ENST00000540395 KCNA4P22459 653 aa11.92□□□□□ -0.5
MEPE-208ENST00000540395 POLA1P09884 1462 aaPredicted RBP11.92□□□□□ -0.5
MEPE-208ENST00000540395 LOC105371045A0A1W2PR82 267 aa11.91□□□□□ -0.5
MEPE-208ENST00000540395 THOC2Q8NI27 1593 aaKnown RBP11.88□□□□□ -0.51
MEPE-208ENST00000540395 WDR62O43379 1518 aa11.88□□□□□ -0.51
MEPE-208ENST00000540395 CUX2O14529 1486 aa11.86□□□□□ -0.51
MEPE-208ENST00000540395 TDRD9Q8NDG6 1382 aaKnown RBP11.86□□□□□ -0.51
MEPE-208ENST00000540395 CSRNP3Q8WYN3 585 aa11.86□□□□□ -0.51
MEPE-208ENST00000540395 KIF27Q86VH2 1401 aa11.82□□□□□ -0.52
MEPE-208ENST00000540395 ABCA10Q8WWZ4 1543 aa11.82□□□□□ -0.52
MEPE-208ENST00000540395 EEA1Q15075 1411 aa11.79□□□□□ -0.52
MEPE-208ENST00000540395 AQRO60306 1485 aaKnown RBP eCLIP11.79□□□□□ -0.52
MEPE-208ENST00000540395 ZNF608Q9ULD9 1512 aaPredicted RBP11.79□□□□□ -0.52
MEPE-208ENST00000540395 TARBP1Q13395 1621 aaKnown RBP11.79□□□□□ -0.52
MEPE-208ENST00000540395 IGF1RP08069 1367 aa11.79□□□□□ -0.52
MEPE-208ENST00000540395 IFT140Q96RY7 1462 aa11.78□□□□□ -0.52
MEPE-208ENST00000540395 GAPVD1Q14C86 1478 aa11.75□□□□□ -0.53
MEPE-208ENST00000540395 WDR97A6NE52 1622 aa11.74□□□□□ -0.53
MEPE-208ENST00000540395 POTEDQ86YR6 584 aa11.73□□□□□ -0.53
MEPE-208ENST00000540395 UBTFP17480 764 aaKnown RBP11.72□□□□□ -0.53
MEPE-208ENST00000540395 CARMIL1Q5VZK9 1371 aa11.71□□□□□ -0.53
MEPE-208ENST00000540395 ABCA5Q8WWZ7 1642 aa11.71□□□□□ -0.54
MEPE-208ENST00000540395 RAPGEF2Q9Y4G8 1499 aa11.71□□□□□ -0.54
MEPE-208ENST00000540395 PRXQ9BXM0 1461 aa11.7□□□□□ -0.54
MEPE-208ENST00000540395 ADRA2BP18089 450 aa11.69□□□□□ -0.54
MEPE-208ENST00000540395 RANGAP1P46060 587 aaPredicted RBP11.67□□□□□ -0.54
MEPE-208ENST00000540395 GRIN2BQ13224 1484 aa11.67□□□□□ -0.54
MEPE-208ENST00000540395 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
MEPE-208ENST00000540395 GOLGA3Q08378 1498 aa11.66□□□□□ -0.54
MEPE-208ENST00000540395 ERICH3Q5RHP9 1530 aa11.65□□□□□ -0.54
MEPE-208ENST00000540395 KIF21BO75037 1637 aa11.65□□□□□ -0.54
MEPE-208ENST00000540395 FBLN2P98095 1184 aa11.64□□□□□ -0.55
MEPE-208ENST00000540395 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
MEPE-208ENST00000540395 PBRM1Q86U86 1689 aa11.62□□□□□ -0.55
MEPE-208ENST00000540395 TNIKQ9UKE5 1360 aa11.61□□□□□ -0.55
MEPE-208ENST00000540395 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms