RNA–Protein interactions for RNA: ENST00000538758.1

RIMKLB-208, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 3

Gene RIMKLB, Length 570 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-208ENST00000538758 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
RIMKLB-208ENST00000538758 CCDC180Q9P1Z9 1646 aa19.48■□□□□ 0.71
RIMKLB-208ENST00000538758 ABCC9O60706 1549 aa19.09■□□□□ 0.65
RIMKLB-208ENST00000538758 DCAF8L2P0C7V8 631 aa18.52■□□□□ 0.56
RIMKLB-208ENST00000538758 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
RIMKLB-208ENST00000538758 NACADO15069 1562 aa18.35■□□□□ 0.53
RIMKLB-208ENST00000538758 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
RIMKLB-208ENST00000538758 MYO15BQ96JP2 1530 aa18.27■□□□□ 0.51
RIMKLB-208ENST00000538758 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
RIMKLB-208ENST00000538758 PABPN1Q86U42 306 aaKnown RBP eCLIP17.93■□□□□ 0.46
RIMKLB-208ENST00000538758 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
RIMKLB-208ENST00000538758 SCRIBQ14160 1630 aa17.83■□□□□ 0.45
RIMKLB-208ENST00000538758 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
RIMKLB-208ENST00000538758 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
RIMKLB-208ENST00000538758 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
RIMKLB-208ENST00000538758 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
RIMKLB-208ENST00000538758 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
RIMKLB-208ENST00000538758 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
RIMKLB-208ENST00000538758 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
RIMKLB-208ENST00000538758 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
RIMKLB-208ENST00000538758 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.32
RIMKLB-208ENST00000538758 ATAD2BQ9ULI0 1458 aa17■□□□□ 0.31
RIMKLB-208ENST00000538758 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
RIMKLB-208ENST00000538758 SMARCA2P51531 1590 aa16.93■□□□□ 0.3
RIMKLB-208ENST00000538758 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.3
RIMKLB-208ENST00000538758 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
RIMKLB-208ENST00000538758 WIZO95785 1651 aa16.83■□□□□ 0.28
RIMKLB-208ENST00000538758 HMGXB3Q12766 1538 aa16.83■□□□□ 0.28
RIMKLB-208ENST00000538758 BAZ1BQ9UIG0 1483 aaKnown RBP16.83■□□□□ 0.28
RIMKLB-208ENST00000538758 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
RIMKLB-208ENST00000538758 TOP2AP11388 1531 aaKnown RBP16.62■□□□□ 0.25
RIMKLB-208ENST00000538758 SUPT5HO00267 1087 aaKnown RBP16.59■□□□□ 0.25
RIMKLB-208ENST00000538758 NESP48681 1621 aa16.56■□□□□ 0.24
RIMKLB-208ENST00000538758 CADPSQ9ULU8 1353 aa16.51■□□□□ 0.23
RIMKLB-208ENST00000538758 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
RIMKLB-208ENST00000538758 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
RIMKLB-208ENST00000538758 ERCC6Q03468 1493 aa16.41■□□□□ 0.22
RIMKLB-208ENST00000538758 CFTRP13569 1480 aa16.4■□□□□ 0.22
RIMKLB-208ENST00000538758 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
RIMKLB-208ENST00000538758 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
RIMKLB-208ENST00000538758 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
RIMKLB-208ENST00000538758 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
RIMKLB-208ENST00000538758 THOC2Q8NI27 1593 aaKnown RBP16.21■□□□□ 0.18
RIMKLB-208ENST00000538758 CUX2O14529 1486 aa16.19■□□□□ 0.18
RIMKLB-208ENST00000538758 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
RIMKLB-208ENST00000538758 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
RIMKLB-208ENST00000538758 WDR62O43379 1518 aa16.12■□□□□ 0.17
RIMKLB-208ENST00000538758 URB2Q14146 1524 aaKnown RBP16.12■□□□□ 0.17
RIMKLB-208ENST00000538758 AEBP2Q6ZN18 517 aaPredicted RBP16.1■□□□□ 0.17
RIMKLB-208ENST00000538758 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
RIMKLB-208ENST00000538758 ABCC8Q09428 1581 aa16.03■□□□□ 0.16
RIMKLB-208ENST00000538758 DNMBPQ6XZF7 1577 aa15.99■□□□□ 0.15
RIMKLB-208ENST00000538758 CUX1P39880 1505 aa15.95■□□□□ 0.14
RIMKLB-208ENST00000538758 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
RIMKLB-208ENST00000538758 IFT140Q96RY7 1462 aa15.9■□□□□ 0.14
RIMKLB-208ENST00000538758 SOGA1O94964 1423 aa15.88■□□□□ 0.13
RIMKLB-208ENST00000538758 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
RIMKLB-208ENST00000538758 FGD5Q6ZNL6 1462 aa15.87■□□□□ 0.13
RIMKLB-208ENST00000538758 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
RIMKLB-208ENST00000538758 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
RIMKLB-208ENST00000538758 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.13
RIMKLB-208ENST00000538758 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
RIMKLB-208ENST00000538758 TOP2BQ02880 1626 aa15.81■□□□□ 0.12
RIMKLB-208ENST00000538758 AQRO60306 1485 aaKnown RBP eCLIP15.8■□□□□ 0.12
RIMKLB-208ENST00000538758 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
RIMKLB-208ENST00000538758 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
RIMKLB-208ENST00000538758 ABCA10Q8WWZ4 1543 aa15.72■□□□□ 0.11
RIMKLB-208ENST00000538758 EIF4G3O43432 1585 aaKnown RBP15.71■□□□□ 0.11
RIMKLB-208ENST00000538758 DNAJC5Q9H3Z4 198 aa15.7■□□□□ 0.1
RIMKLB-208ENST00000538758 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
RIMKLB-208ENST00000538758 GAPVD1Q14C86 1478 aa15.67■□□□□ 0.1
RIMKLB-208ENST00000538758 OSCARQ8IYS5 282 aa15.65■□□□□ 0.1
RIMKLB-208ENST00000538758 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
RIMKLB-208ENST00000538758 GRIN2BQ13224 1484 aa15.64■□□□□ 0.09
RIMKLB-208ENST00000538758 FBLN2P98095 1184 aa15.62■□□□□ 0.09
RIMKLB-208ENST00000538758 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
RIMKLB-208ENST00000538758 SNAPC4Q5SXM2 1469 aa15.59■□□□□ 0.09
RIMKLB-208ENST00000538758 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
RIMKLB-208ENST00000538758 MAGI1Q96QZ7 1491 aaPredicted RBP15.57■□□□□ 0.08
RIMKLB-208ENST00000538758 PBRM1Q86U86 1689 aa15.56■□□□□ 0.08
RIMKLB-208ENST00000538758 KIF27Q86VH2 1401 aa15.54■□□□□ 0.08
RIMKLB-208ENST00000538758 IGF1RP08069 1367 aa15.54■□□□□ 0.08
RIMKLB-208ENST00000538758 ERICH3Q5RHP9 1530 aa15.53■□□□□ 0.08
RIMKLB-208ENST00000538758 SYNJ2O15056 1496 aa15.52■□□□□ 0.08
RIMKLB-208ENST00000538758 CHD1O14646 1710 aa15.51■□□□□ 0.07
RIMKLB-208ENST00000538758 RUSC2Q8N2Y8 1516 aa15.49■□□□□ 0.07
RIMKLB-208ENST00000538758 FHAD1B1AJZ9 1412 aa15.49■□□□□ 0.07
RIMKLB-208ENST00000538758 ADAMTS12P58397 1594 aa15.45■□□□□ 0.06
RIMKLB-208ENST00000538758 CARMIL1Q5VZK9 1371 aa15.43■□□□□ 0.06
RIMKLB-208ENST00000538758 GRIN2AQ12879 1464 aa15.43■□□□□ 0.06
RIMKLB-208ENST00000538758 NUP160Q12769 1436 aa15.37■□□□□ 0.05
RIMKLB-208ENST00000538758 CUL7Q14999 1698 aa15.36■□□□□ 0.05
RIMKLB-208ENST00000538758 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
RIMKLB-208ENST00000538758 CLASP1Q7Z460 1538 aa15.36■□□□□ 0.05
RIMKLB-208ENST00000538758 CEP170Q5SW79 1584 aa15.34■□□□□ 0.05
RIMKLB-208ENST00000538758 FAM9AQ8IZU1 332 aaPredicted RBP15.34■□□□□ 0.05
RIMKLB-208ENST00000538758 JPH4Q96JJ6 628 aa15.31■□□□□ 0.04
RIMKLB-208ENST00000538758 RAPGEF2Q9Y4G8 1499 aa15.31■□□□□ 0.04
RIMKLB-208ENST00000538758 ARHGEF11O15085 1522 aa15.29■□□□□ 0.04
RIMKLB-208ENST00000538758 EEA1Q15075 1411 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms