RNA–Protein interactions for RNA: ENST00000538551.1

AC024940.3-201, humanhuman

BASIC

Gene AC024940.3, Length 316 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC024940.3-201ENST00000538551 AEBP2Q6ZN18 517 aaPredicted RBP14.69□□□□□ -0.06
AC024940.3-201ENST00000538551 CHIC1Q5VXU3 224 aa14□□□□□ -0.17
AC024940.3-201ENST00000538551 NISCHQ9Y2I1 1504 aa12.88□□□□□ -0.35
AC024940.3-201ENST00000538551 SENP3Q9H4L4 574 aaPredicted RBP12.56□□□□□ -0.4
AC024940.3-201ENST00000538551 PHF23Q9BUL5 403 aaPredicted RBP12.4□□□□□ -0.42
AC024940.3-201ENST00000538551 FOXD1Q16676 465 aa11.68□□□□□ -0.54
AC024940.3-201ENST00000538551 CCDC180Q9P1Z9 1646 aa11.61□□□□□ -0.55
AC024940.3-201ENST00000538551 PLPPR3Q6T4P5 718 aa11.23□□□□□ -0.61
AC024940.3-201ENST00000538551 ABCC9O60706 1549 aa11.16□□□□□ -0.62
AC024940.3-201ENST00000538551 POTEDQ86YR6 584 aa11.15□□□□□ -0.62
AC024940.3-201ENST00000538551 MSH5O43196 834 aa11.09□□□□□ -0.63
AC024940.3-201ENST00000538551 PIAS4Q8N2W9 510 aaPredicted RBP10.96□□□□□ -0.65
AC024940.3-201ENST00000538551 PPP6R1Q9UPN7 881 aa10.94□□□□□ -0.66
AC024940.3-201ENST00000538551 ADRA2BP18089 450 aa10.93□□□□□ -0.66
AC024940.3-201ENST00000538551 RB1CC1Q8TDY2 1594 aa10.86□□□□□ -0.67
AC024940.3-201ENST00000538551 NACADO15069 1562 aa10.84□□□□□ -0.67
AC024940.3-201ENST00000538551 MYO15BQ96JP2 1530 aa10.79□□□□□ -0.68
AC024940.3-201ENST00000538551 ZCCHC6Q5VYS8 1495 aaKnown RBP10.75□□□□□ -0.69
AC024940.3-201ENST00000538551 DCAF1Q9Y4B6 1507 aa10.73□□□□□ -0.69
AC024940.3-201ENST00000538551 UNC13AQ9UPW8 1703 aa10.68□□□□□ -0.7
AC024940.3-201ENST00000538551 DCAF8L2P0C7V8 631 aa10.59□□□□□ -0.71
AC024940.3-201ENST00000538551 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
AC024940.3-201ENST00000538551 BICRAQ9NZM4 1560 aa10.48□□□□□ -0.73
AC024940.3-201ENST00000538551 SCRIBQ14160 1630 aa10.47□□□□□ -0.73
AC024940.3-201ENST00000538551 PABPN1Q86U42 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
AC024940.3-201ENST00000538551 EIF4G1Q04637 1599 aaKnown RBP10.22□□□□□ -0.77
AC024940.3-201ENST00000538551 CC2D2AQ9P2K1 1620 aa10.18□□□□□ -0.78
AC024940.3-201ENST00000538551 DNAJC5BQ9UF47 199 aa10.14□□□□□ -0.79
AC024940.3-201ENST00000538551 CECR2Q9BXF3 1484 aa10.07□□□□□ -0.8
AC024940.3-201ENST00000538551 SMARCA4P51532 1647 aa10.05□□□□□ -0.8
AC024940.3-201ENST00000538551 BAZ1AQ9NRL2 1556 aaPredicted RBP10.04□□□□□ -0.8
AC024940.3-201ENST00000538551 MAPK8IP2Q13387 824 aaPredicted RBP10.03□□□□□ -0.8
AC024940.3-201ENST00000538551 SCAF1Q9H7N4 1312 aaKnown RBP10.03□□□□□ -0.8
AC024940.3-201ENST00000538551 SMARCA2P51531 1590 aa9.99□□□□□ -0.81
AC024940.3-201ENST00000538551 PEG3Q9GZU2 1588 aa9.97□□□□□ -0.81
AC024940.3-201ENST00000538551 HMGXB3Q12766 1538 aa9.97□□□□□ -0.81
AC024940.3-201ENST00000538551 DMRT2Q9Y5R5 561 aa9.95□□□□□ -0.82
AC024940.3-201ENST00000538551 NCAPD3P42695 1498 aa9.93□□□□□ -0.82
AC024940.3-201ENST00000538551 ATAD2BQ9ULI0 1458 aa9.92□□□□□ -0.82
AC024940.3-201ENST00000538551 MROH2BQ7Z745 1585 aa9.89□□□□□ -0.83
AC024940.3-201ENST00000538551 BAZ1BQ9UIG0 1483 aaKnown RBP9.87□□□□□ -0.83
AC024940.3-201ENST00000538551 PPP4R3CPQ6ZMV5 832 aa9.85□□□□□ -0.83
AC024940.3-201ENST00000538551 WIZO95785 1651 aa9.83□□□□□ -0.84
AC024940.3-201ENST00000538551 LAMC3Q9Y6N6 1575 aa9.76□□□□□ -0.85
AC024940.3-201ENST00000538551 RSF1Q96T23 1441 aaPredicted RBP9.75□□□□□ -0.85
AC024940.3-201ENST00000538551 TOP2AP11388 1531 aaKnown RBP9.75□□□□□ -0.85
AC024940.3-201ENST00000538551 PRDM2Q13029 1718 aa9.72□□□□□ -0.85
AC024940.3-201ENST00000538551 KIF21AQ7Z4S6 1674 aa9.67□□□□□ -0.86
AC024940.3-201ENST00000538551 ERCC6Q03468 1493 aa9.67□□□□□ -0.86
AC024940.3-201ENST00000538551 NESP48681 1621 aa9.66□□□□□ -0.86
AC024940.3-201ENST00000538551 CNKSR2Q8WXI2 1034 aa9.65□□□□□ -0.86
AC024940.3-201ENST00000538551 THOC2Q8NI27 1593 aaKnown RBP9.63□□□□□ -0.87
AC024940.3-201ENST00000538551 CUX2O14529 1486 aa9.63□□□□□ -0.87
AC024940.3-201ENST00000538551 PDS5BQ9NTI5 1447 aa9.62□□□□□ -0.87
AC024940.3-201ENST00000538551 CADPSQ9ULU8 1353 aa9.62□□□□□ -0.87
AC024940.3-201ENST00000538551 DCAF8L1A6NGE4 600 aa9.61□□□□□ -0.87
AC024940.3-201ENST00000538551 CFTRP13569 1480 aa9.59□□□□□ -0.87
AC024940.3-201ENST00000538551 HOXD11P31277 338 aaPredicted RBP9.59□□□□□ -0.87
AC024940.3-201ENST00000538551 CACNB1Q02641 598 aaPredicted RBP9.57□□□□□ -0.88
AC024940.3-201ENST00000538551 CCDC88BA6NC98 1476 aa9.55□□□□□ -0.88
AC024940.3-201ENST00000538551 CEP164Q9UPV0 1460 aa9.55□□□□□ -0.88
AC024940.3-201ENST00000538551 RNF216Q9NWF9 866 aaPredicted RBP9.54□□□□□ -0.88
AC024940.3-201ENST00000538551 WDR62O43379 1518 aa9.54□□□□□ -0.88
AC024940.3-201ENST00000538551 MRC2Q9UBG0 1479 aa9.53□□□□□ -0.88
AC024940.3-201ENST00000538551 FANCD2Q9BXW9 1451 aa9.53□□□□□ -0.88
AC024940.3-201ENST00000538551 NCBP3Q53F19 620 aaKnown RBP9.5□□□□□ -0.89
AC024940.3-201ENST00000538551 ABCC8Q09428 1581 aa9.43□□□□□ -0.9
AC024940.3-201ENST00000538551 DNMBPQ6XZF7 1577 aa9.43□□□□□ -0.9
AC024940.3-201ENST00000538551 URB2Q14146 1524 aaKnown RBP9.43□□□□□ -0.9
AC024940.3-201ENST00000538551 SUPT5HO00267 1087 aaKnown RBP9.39□□□□□ -0.91
AC024940.3-201ENST00000538551 TOPBP1Q92547 1522 aa9.38□□□□□ -0.91
AC024940.3-201ENST00000538551 RNF39Q9H2S5 420 aa9.37□□□□□ -0.91
AC024940.3-201ENST00000538551 WDR97A6NE52 1622 aa9.35□□□□□ -0.91
AC024940.3-201ENST00000538551 IFT140Q96RY7 1462 aa9.34□□□□□ -0.91
AC024940.3-201ENST00000538551 NPM3O75607 178 aaKnown RBP9.33□□□□□ -0.92
AC024940.3-201ENST00000538551 TARBP1Q13395 1621 aaKnown RBP9.32□□□□□ -0.92
AC024940.3-201ENST00000538551 EIF4G3O43432 1585 aaKnown RBP9.32□□□□□ -0.92
AC024940.3-201ENST00000538551 BIVM-ERCC5R4GMW8 1640 aa9.31□□□□□ -0.92
AC024940.3-201ENST00000538551 POLA1P09884 1462 aaPredicted RBP9.3□□□□□ -0.92
AC024940.3-201ENST00000538551 CUX1P39880 1505 aa9.3□□□□□ -0.92
AC024940.3-201ENST00000538551 C1QBPQ07021 282 aaKnown RBP9.29□□□□□ -0.92
AC024940.3-201ENST00000538551 TOP2BQ02880 1626 aa9.28□□□□□ -0.92
AC024940.3-201ENST00000538551 FGD5Q6ZNL6 1462 aa9.28□□□□□ -0.92
AC024940.3-201ENST00000538551 PBRM1Q86U86 1689 aa9.26□□□□□ -0.93
AC024940.3-201ENST00000538551 ZNF608Q9ULD9 1512 aaPredicted RBP9.24□□□□□ -0.93
AC024940.3-201ENST00000538551 SYNJ1O43426 1573 aa9.24□□□□□ -0.93
AC024940.3-201ENST00000538551 WRNQ14191 1432 aaPredicted RBP eCLIP9.23□□□□□ -0.93
AC024940.3-201ENST00000538551 CHD1O14646 1710 aa9.23□□□□□ -0.93
AC024940.3-201ENST00000538551 ABCA5Q8WWZ7 1642 aa9.22□□□□□ -0.93
AC024940.3-201ENST00000538551 SOGA1O94964 1423 aa9.22□□□□□ -0.93
AC024940.3-201ENST00000538551 DNAJC5Q9H3Z4 198 aa9.21□□□□□ -0.94
AC024940.3-201ENST00000538551 RAD54L2Q9Y4B4 1467 aa9.21□□□□□ -0.94
AC024940.3-201ENST00000538551 ABCA10Q8WWZ4 1543 aa9.21□□□□□ -0.94
AC024940.3-201ENST00000538551 KCNA4P22459 653 aa9.19□□□□□ -0.94
AC024940.3-201ENST00000538551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.19□□□□□ -0.94
AC024940.3-201ENST00000538551 MAGI1Q96QZ7 1491 aaPredicted RBP9.18□□□□□ -0.94
AC024940.3-201ENST00000538551 AQRO60306 1485 aaKnown RBP eCLIP9.16□□□□□ -0.94
AC024940.3-201ENST00000538551 GRIN2BQ13224 1484 aa9.16□□□□□ -0.94
AC024940.3-201ENST00000538551 GAPVD1Q14C86 1478 aa9.15□□□□□ -0.94
AC024940.3-201ENST00000538551 SNAPC4Q5SXM2 1469 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms