RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
CIT-209ENST00000538073 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
CIT-209ENST00000538073 NISCHQ9Y2I1 1504 aa19.14■□□□□ 0.65
CIT-209ENST00000538073 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
CIT-209ENST00000538073 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
CIT-209ENST00000538073 CCDC180Q9P1Z9 1646 aa16.92■□□□□ 0.3
CIT-209ENST00000538073 FOXD1Q16676 465 aa16.55■□□□□ 0.24
CIT-209ENST00000538073 ABCC9O60706 1549 aa16.24■□□□□ 0.19
CIT-209ENST00000538073 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
CIT-209ENST00000538073 DCAF1Q9Y4B6 1507 aa15.88■□□□□ 0.13
CIT-209ENST00000538073 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
CIT-209ENST00000538073 POTEDQ86YR6 584 aa15.84■□□□□ 0.13
CIT-209ENST00000538073 NACADO15069 1562 aa15.83■□□□□ 0.13
CIT-209ENST00000538073 DCAF8L2P0C7V8 631 aa15.78■□□□□ 0.12
CIT-209ENST00000538073 RB1CC1Q8TDY2 1594 aa15.77■□□□□ 0.11
CIT-209ENST00000538073 MSH5O43196 834 aa15.64■□□□□ 0.09
CIT-209ENST00000538073 UNC13AQ9UPW8 1703 aa15.45■□□□□ 0.06
CIT-209ENST00000538073 PIAS4Q8N2W9 510 aaPredicted RBP15.43■□□□□ 0.06
CIT-209ENST00000538073 SCRIBQ14160 1630 aa15.41■□□□□ 0.06
CIT-209ENST00000538073 BICRAQ9NZM4 1560 aa15.32■□□□□ 0.04
CIT-209ENST00000538073 PLPPR3Q6T4P5 718 aa15.3■□□□□ 0.04
CIT-209ENST00000538073 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
CIT-209ENST00000538073 PPP6R1Q9UPN7 881 aa15.2■□□□□ 0.02
CIT-209ENST00000538073 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
CIT-209ENST00000538073 ADRA2BP18089 450 aa15.17■□□□□ 0.02
CIT-209ENST00000538073 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
CIT-209ENST00000538073 EIF4G1Q04637 1599 aaKnown RBP14.87□□□□□ -0.03
CIT-209ENST00000538073 CECR2Q9BXF3 1484 aa14.86□□□□□ -0.03
CIT-209ENST00000538073 BAZ1AQ9NRL2 1556 aaPredicted RBP14.81□□□□□ -0.04
CIT-209ENST00000538073 SMARCA4P51532 1647 aa14.8□□□□□ -0.04
CIT-209ENST00000538073 MROH2BQ7Z745 1585 aa14.75□□□□□ -0.05
CIT-209ENST00000538073 CC2D2AQ9P2K1 1620 aa14.73□□□□□ -0.05
CIT-209ENST00000538073 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
CIT-209ENST00000538073 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
CIT-209ENST00000538073 ATAD2BQ9ULI0 1458 aa14.64□□□□□ -0.07
CIT-209ENST00000538073 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
CIT-209ENST00000538073 NCAPD3P42695 1498 aa14.61□□□□□ -0.07
CIT-209ENST00000538073 WIZO95785 1651 aa14.6□□□□□ -0.07
CIT-209ENST00000538073 HMGXB3Q12766 1538 aa14.57□□□□□ -0.08
CIT-209ENST00000538073 BAZ1BQ9UIG0 1483 aaKnown RBP14.52□□□□□ -0.08
CIT-209ENST00000538073 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.09
CIT-209ENST00000538073 SUPT5HO00267 1087 aaKnown RBP14.42□□□□□ -0.1
CIT-209ENST00000538073 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
CIT-209ENST00000538073 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
CIT-209ENST00000538073 CADPSQ9ULU8 1353 aa14.18□□□□□ -0.14
CIT-209ENST00000538073 CFTRP13569 1480 aa14.17□□□□□ -0.14
CIT-209ENST00000538073 NESP48681 1621 aa14.15□□□□□ -0.14
CIT-209ENST00000538073 PRDM2Q13029 1718 aa14.1□□□□□ -0.15
CIT-209ENST00000538073 PDS5BQ9NTI5 1447 aa14.04□□□□□ -0.16
CIT-209ENST00000538073 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
CIT-209ENST00000538073 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
CIT-209ENST00000538073 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
CIT-209ENST00000538073 DMRT2Q9Y5R5 561 aa13.99□□□□□ -0.17
CIT-209ENST00000538073 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
CIT-209ENST00000538073 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.17
CIT-209ENST00000538073 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
CIT-209ENST00000538073 MRC2Q9UBG0 1479 aa13.9□□□□□ -0.18
CIT-209ENST00000538073 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
CIT-209ENST00000538073 WDR62O43379 1518 aa13.86□□□□□ -0.19
CIT-209ENST00000538073 URB2Q14146 1524 aaKnown RBP13.86□□□□□ -0.19
CIT-209ENST00000538073 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
CIT-209ENST00000538073 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.19
CIT-209ENST00000538073 CUX1P39880 1505 aa13.82□□□□□ -0.2
CIT-209ENST00000538073 TOPBP1Q92547 1522 aa13.82□□□□□ -0.2
CIT-209ENST00000538073 WRNQ14191 1432 aaPredicted RBP eCLIP13.81□□□□□ -0.2
CIT-209ENST00000538073 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
CIT-209ENST00000538073 SYNJ1O43426 1573 aa13.78□□□□□ -0.2
CIT-209ENST00000538073 TOP2BQ02880 1626 aa13.78□□□□□ -0.2
CIT-209ENST00000538073 CUX2O14529 1486 aa13.77□□□□□ -0.21
CIT-209ENST00000538073 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
CIT-209ENST00000538073 FGD5Q6ZNL6 1462 aa13.72□□□□□ -0.21
CIT-209ENST00000538073 TARBP1Q13395 1621 aaKnown RBP13.68□□□□□ -0.22
CIT-209ENST00000538073 IFT140Q96RY7 1462 aa13.67□□□□□ -0.22
CIT-209ENST00000538073 CACNB1Q02641 598 aaPredicted RBP13.66□□□□□ -0.22
CIT-209ENST00000538073 RAD54L2Q9Y4B4 1467 aa13.65□□□□□ -0.22
CIT-209ENST00000538073 SOGA1O94964 1423 aa13.64□□□□□ -0.23
CIT-209ENST00000538073 WDR97A6NE52 1622 aa13.64□□□□□ -0.23
CIT-209ENST00000538073 TRIM41Q8WV44 630 aa13.63□□□□□ -0.23
CIT-209ENST00000538073 ABCA10Q8WWZ4 1543 aa13.61□□□□□ -0.23
CIT-209ENST00000538073 ZNF608Q9ULD9 1512 aaPredicted RBP13.57□□□□□ -0.24
CIT-209ENST00000538073 EIF4G3O43432 1585 aaKnown RBP13.54□□□□□ -0.24
CIT-209ENST00000538073 ABCA5Q8WWZ7 1642 aa13.54□□□□□ -0.24
CIT-209ENST00000538073 DCAF8L1A6NGE4 600 aa13.54□□□□□ -0.24
CIT-209ENST00000538073 TDRD9Q8NDG6 1382 aaKnown RBP13.54□□□□□ -0.24
CIT-209ENST00000538073 DNAJC5Q9H3Z4 198 aa13.53□□□□□ -0.24
CIT-209ENST00000538073 AQRO60306 1485 aaKnown RBP eCLIP13.53□□□□□ -0.243e-8■■■□□ 16
CIT-209ENST00000538073 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
CIT-209ENST00000538073 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
CIT-209ENST00000538073 PBRM1Q86U86 1689 aa13.49□□□□□ -0.25
CIT-209ENST00000538073 GRIN2BQ13224 1484 aa13.47□□□□□ -0.25
CIT-209ENST00000538073 ERICH3Q5RHP9 1530 aa13.46□□□□□ -0.25
CIT-209ENST00000538073 RUSC2Q8N2Y8 1516 aa13.46□□□□□ -0.25
CIT-209ENST00000538073 EEA1Q15075 1411 aa13.43□□□□□ -0.26
CIT-209ENST00000538073 IGF1RP08069 1367 aa13.43□□□□□ -0.26
CIT-209ENST00000538073 MAGI1Q96QZ7 1491 aaPredicted RBP13.42□□□□□ -0.26
CIT-209ENST00000538073 SNAPC4Q5SXM2 1469 aa13.41□□□□□ -0.26
CIT-209ENST00000538073 ADAMTS12P58397 1594 aa13.39□□□□□ -0.27
CIT-209ENST00000538073 CUL7Q14999 1698 aa13.38□□□□□ -0.27
CIT-209ENST00000538073 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
CIT-209ENST00000538073 SYNJ2O15056 1496 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms