RNA–Protein interactions for RNA: ENST00000536944.2

AP003170.1-201, humanhuman

BASIC

Gene AP003170.1, Length 1,030 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003170.1-201ENST00000536944 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
AP003170.1-201ENST00000536944 CCDC180Q9P1Z9 1646 aa19.56■□□□□ 0.72
AP003170.1-201ENST00000536944 ABCC9O60706 1549 aa18.89■□□□□ 0.61
AP003170.1-201ENST00000536944 ZCCHC6Q5VYS8 1495 aaKnown RBP18.45■□□□□ 0.54
AP003170.1-201ENST00000536944 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.54
AP003170.1-201ENST00000536944 NACADO15069 1562 aa18.38■□□□□ 0.53
AP003170.1-201ENST00000536944 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
AP003170.1-201ENST00000536944 DCAF1Q9Y4B6 1507 aa18.35■□□□□ 0.53
AP003170.1-201ENST00000536944 DCAF8L2P0C7V8 631 aa18.3■□□□□ 0.52
AP003170.1-201ENST00000536944 SCRIBQ14160 1630 aa17.78■□□□□ 0.44
AP003170.1-201ENST00000536944 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
AP003170.1-201ENST00000536944 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
AP003170.1-201ENST00000536944 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
AP003170.1-201ENST00000536944 PABPN1Q86U42 306 aaKnown RBP eCLIP17.65■□□□□ 0.42
AP003170.1-201ENST00000536944 EIF4G1Q04637 1599 aaKnown RBP17.25■□□□□ 0.35
AP003170.1-201ENST00000536944 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
AP003170.1-201ENST00000536944 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
AP003170.1-201ENST00000536944 CECR2Q9BXF3 1484 aa17.09■□□□□ 0.33
AP003170.1-201ENST00000536944 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
AP003170.1-201ENST00000536944 SMARCA4P51532 1647 aa17.06■□□□□ 0.32
AP003170.1-201ENST00000536944 SMARCA2P51531 1590 aa16.99■□□□□ 0.31
AP003170.1-201ENST00000536944 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
AP003170.1-201ENST00000536944 NCAPD3P42695 1498 aa16.95■□□□□ 0.3
AP003170.1-201ENST00000536944 ATAD2BQ9ULI0 1458 aa16.95■□□□□ 0.3
AP003170.1-201ENST00000536944 PEG3Q9GZU2 1588 aa16.94■□□□□ 0.3
AP003170.1-201ENST00000536944 HMGXB3Q12766 1538 aa16.9■□□□□ 0.3
AP003170.1-201ENST00000536944 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
AP003170.1-201ENST00000536944 BAZ1BQ9UIG0 1483 aaKnown RBP16.85■□□□□ 0.29
AP003170.1-201ENST00000536944 WIZO95785 1651 aa16.73■□□□□ 0.27
AP003170.1-201ENST00000536944 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
AP003170.1-201ENST00000536944 SUPT5HO00267 1087 aaKnown RBP16.51■□□□□ 0.23
AP003170.1-201ENST00000536944 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
AP003170.1-201ENST00000536944 CADPSQ9ULU8 1353 aa16.46■□□□□ 0.23
AP003170.1-201ENST00000536944 CCDC88BA6NC98 1476 aa16.43■□□□□ 0.22
AP003170.1-201ENST00000536944 PDS5BQ9NTI5 1447 aa16.4■□□□□ 0.22
AP003170.1-201ENST00000536944 CFTRP13569 1480 aa16.4■□□□□ 0.22
AP003170.1-201ENST00000536944 ERCC6Q03468 1493 aa16.35■□□□□ 0.21
AP003170.1-201ENST00000536944 NESP48681 1621 aa16.35■□□□□ 0.21
AP003170.1-201ENST00000536944 FANCD2Q9BXW9 1451 aa16.25■□□□□ 0.19
AP003170.1-201ENST00000536944 CEP164Q9UPV0 1460 aa16.25■□□□□ 0.19
AP003170.1-201ENST00000536944 MRC2Q9UBG0 1479 aa16.18■□□□□ 0.18
AP003170.1-201ENST00000536944 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
AP003170.1-201ENST00000536944 CUX2O14529 1486 aa16.16■□□□□ 0.18
AP003170.1-201ENST00000536944 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.18
AP003170.1-201ENST00000536944 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
AP003170.1-201ENST00000536944 ABCC8Q09428 1581 aa16.11■□□□□ 0.17
AP003170.1-201ENST00000536944 WDR62O43379 1518 aa16.1■□□□□ 0.17
AP003170.1-201ENST00000536944 URB2Q14146 1524 aaKnown RBP16.03■□□□□ 0.16
AP003170.1-201ENST00000536944 DNMBPQ6XZF7 1577 aa16.01■□□□□ 0.15
AP003170.1-201ENST00000536944 TOPBP1Q92547 1522 aa15.99■□□□□ 0.15
AP003170.1-201ENST00000536944 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
AP003170.1-201ENST00000536944 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
AP003170.1-201ENST00000536944 CUX1P39880 1505 aa15.9■□□□□ 0.14
AP003170.1-201ENST00000536944 POLA1P09884 1462 aaPredicted RBP15.87■□□□□ 0.13
AP003170.1-201ENST00000536944 FGD5Q6ZNL6 1462 aa15.85■□□□□ 0.13
AP003170.1-201ENST00000536944 TOP2BQ02880 1626 aa15.85■□□□□ 0.13
AP003170.1-201ENST00000536944 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.13
AP003170.1-201ENST00000536944 SOGA1O94964 1423 aa15.83■□□□□ 0.12
AP003170.1-201ENST00000536944 WDR97A6NE52 1622 aa15.8■□□□□ 0.12
AP003170.1-201ENST00000536944 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
AP003170.1-201ENST00000536944 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
AP003170.1-201ENST00000536944 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
AP003170.1-201ENST00000536944 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
AP003170.1-201ENST00000536944 ZNF608Q9ULD9 1512 aaPredicted RBP15.7■□□□□ 0.1
AP003170.1-201ENST00000536944 EIF4G3O43432 1585 aaKnown RBP15.69■□□□□ 0.1
AP003170.1-201ENST00000536944 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
AP003170.1-201ENST00000536944 TDRD9Q8NDG6 1382 aaKnown RBP15.66■□□□□ 0.1
AP003170.1-201ENST00000536944 AQRO60306 1485 aaKnown RBP eCLIP15.65■□□□□ 0.1
AP003170.1-201ENST00000536944 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
AP003170.1-201ENST00000536944 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
AP003170.1-201ENST00000536944 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
AP003170.1-201ENST00000536944 ABCA5Q8WWZ7 1642 aa15.63■□□□□ 0.09
AP003170.1-201ENST00000536944 MAGI1Q96QZ7 1491 aaPredicted RBP15.61■□□□□ 0.09
AP003170.1-201ENST00000536944 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.09
AP003170.1-201ENST00000536944 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
AP003170.1-201ENST00000536944 SYNJ2O15056 1496 aa15.52■□□□□ 0.08
AP003170.1-201ENST00000536944 PBRM1Q86U86 1689 aa15.52■□□□□ 0.08
AP003170.1-201ENST00000536944 CHIC1Q5VXU3 224 aa15.52■□□□□ 0.08
AP003170.1-201ENST00000536944 FHAD1B1AJZ9 1412 aa15.51■□□□□ 0.07
AP003170.1-201ENST00000536944 EEA1Q15075 1411 aa15.51■□□□□ 0.07
AP003170.1-201ENST00000536944 CHMP7Q8WUX9 453 aaPredicted RBP15.49■□□□□ 0.07
AP003170.1-201ENST00000536944 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
AP003170.1-201ENST00000536944 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
AP003170.1-201ENST00000536944 IGF1RP08069 1367 aa15.47■□□□□ 0.07
AP003170.1-201ENST00000536944 CUL7Q14999 1698 aa15.46■□□□□ 0.07
AP003170.1-201ENST00000536944 FBLN2P98095 1184 aa15.45■□□□□ 0.06
AP003170.1-201ENST00000536944 GRIN2AQ12879 1464 aa15.43■□□□□ 0.06
AP003170.1-201ENST00000536944 CARMIL1Q5VZK9 1371 aa15.41■□□□□ 0.06
AP003170.1-201ENST00000536944 CHD1O14646 1710 aa15.37■□□□□ 0.05
AP003170.1-201ENST00000536944 NUP160Q12769 1436 aa15.36■□□□□ 0.05
AP003170.1-201ENST00000536944 RAPGEF2Q9Y4G8 1499 aa15.36■□□□□ 0.05
AP003170.1-201ENST00000536944 DNAJC5Q9H3Z4 198 aa15.36■□□□□ 0.05
AP003170.1-201ENST00000536944 RUSC2Q8N2Y8 1516 aa15.36■□□□□ 0.05
AP003170.1-201ENST00000536944 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
AP003170.1-201ENST00000536944 PRXQ9BXM0 1461 aa15.33■□□□□ 0.04
AP003170.1-201ENST00000536944 CLASP1Q7Z460 1538 aa15.32■□□□□ 0.04
AP003170.1-201ENST00000536944 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
AP003170.1-201ENST00000536944 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.04
AP003170.1-201ENST00000536944 FAM9AQ8IZU1 332 aaPredicted RBP15.23■□□□□ 0.03
AP003170.1-201ENST00000536944 KIF21BO75037 1637 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms