RNA–Protein interactions for RNA: ENST00000534865.1

MMP17-202, Transcript of matrix metallopeptidase 17, humanhuman

TSL 3

Gene MMP17, Length 1,510 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-202ENST00000534865 NISCHQ9Y2I1 1504 aa40.89■■■■■ 4.14
MMP17-202ENST00000534865 CCDC180Q9P1Z9 1646 aa36.28■■■■□ 3.4
MMP17-202ENST00000534865 ABCC9O60706 1549 aa35.17■■■■□ 3.22
MMP17-202ENST00000534865 ZCCHC6Q5VYS8 1495 aaKnown RBP34.13■■■■□ 3.05
MMP17-202ENST00000534865 DCAF8L2P0C7V8 631 aa34.04■■■■□ 3.04
MMP17-202ENST00000534865 NACADO15069 1562 aa34.01■■■■□ 3.03
MMP17-202ENST00000534865 RB1CC1Q8TDY2 1594 aa33.99■■■■□ 3.03
MMP17-202ENST00000534865 MYO15BQ96JP2 1530 aa33.89■■■■□ 3.02
MMP17-202ENST00000534865 DCAF1Q9Y4B6 1507 aa33.85■■■■□ 3.01
MMP17-202ENST00000534865 UNC13AQ9UPW8 1703 aa33.23■■■□□ 2.91
MMP17-202ENST00000534865 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
MMP17-202ENST00000534865 BICRAQ9NZM4 1560 aa32.91■■■□□ 2.86
MMP17-202ENST00000534865 PABPN1Q86U42 306 aaKnown RBP eCLIP32.88■■■□□ 2.85
MMP17-202ENST00000534865 SHROOM4Q9ULL8 1493 aa32.64■■■□□ 2.82
MMP17-202ENST00000534865 EIF4G1Q04637 1599 aaKnown RBP32.05■■■□□ 2.72
MMP17-202ENST00000534865 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
MMP17-202ENST00000534865 CC2D2AQ9P2K1 1620 aa31.85■■■□□ 2.69
MMP17-202ENST00000534865 CECR2Q9BXF3 1484 aa31.8■■■□□ 2.68
MMP17-202ENST00000534865 BAZ1AQ9NRL2 1556 aaPredicted RBP31.7■■■□□ 2.66
MMP17-202ENST00000534865 SMARCA4P51532 1647 aa31.69■■■□□ 2.66
MMP17-202ENST00000534865 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.64
MMP17-202ENST00000534865 SMARCA2P51531 1590 aa31.43■■■□□ 2.62
MMP17-202ENST00000534865 ATAD2BQ9ULI0 1458 aa31.42■■■□□ 2.62
MMP17-202ENST00000534865 PEG3Q9GZU2 1588 aa31.36■■■□□ 2.61
MMP17-202ENST00000534865 NCAPD3P42695 1498 aa31.35■■■□□ 2.61
MMP17-202ENST00000534865 HMGXB3Q12766 1538 aa31.26■■■□□ 2.59
MMP17-202ENST00000534865 RSF1Q96T23 1441 aaPredicted RBP31.25■■■□□ 2.59
MMP17-202ENST00000534865 BAZ1BQ9UIG0 1483 aaKnown RBP31.21■■■□□ 2.59
MMP17-202ENST00000534865 WIZO95785 1651 aa31.2■■■□□ 2.59
MMP17-202ENST00000534865 TOP2AP11388 1531 aaKnown RBP30.9■■■□□ 2.54
MMP17-202ENST00000534865 SUPT5HO00267 1087 aaKnown RBP30.68■■■□□ 2.5
MMP17-202ENST00000534865 LAMC3Q9Y6N6 1575 aa30.52■■■□□ 2.48
MMP17-202ENST00000534865 NESP48681 1621 aa30.51■■■□□ 2.47
MMP17-202ENST00000534865 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
MMP17-202ENST00000534865 CADPSQ9ULU8 1353 aa30.46■■■□□ 2.47
MMP17-202ENST00000534865 CFTRP13569 1480 aa30.35■■■□□ 2.45
MMP17-202ENST00000534865 ERCC6Q03468 1493 aa30.32■■■□□ 2.44
MMP17-202ENST00000534865 PDS5BQ9NTI5 1447 aa30.29■■■□□ 2.44
MMP17-202ENST00000534865 PRDM2Q13029 1718 aa30.21■■■□□ 2.43
MMP17-202ENST00000534865 KIF21AQ7Z4S6 1674 aa30.2■■■□□ 2.43
MMP17-202ENST00000534865 FANCD2Q9BXW9 1451 aa30.12■■■□□ 2.41
MMP17-202ENST00000534865 CEP164Q9UPV0 1460 aa30.08■■■□□ 2.41
MMP17-202ENST00000534865 THOC2Q8NI27 1593 aaKnown RBP30.02■■■□□ 2.4
MMP17-202ENST00000534865 MRC2Q9UBG0 1479 aa29.96■■■□□ 2.39
MMP17-202ENST00000534865 CUX2O14529 1486 aa29.89■■■□□ 2.38
MMP17-202ENST00000534865 WDR62O43379 1518 aa29.85■■■□□ 2.37
MMP17-202ENST00000534865 URB2Q14146 1524 aaKnown RBP29.79■■■□□ 2.36
MMP17-202ENST00000534865 ABCC8Q09428 1581 aa29.71■■■□□ 2.35
MMP17-202ENST00000534865 DNMBPQ6XZF7 1577 aa29.68■■■□□ 2.34
MMP17-202ENST00000534865 TOPBP1Q92547 1522 aa29.67■■■□□ 2.34
MMP17-202ENST00000534865 CUX1P39880 1505 aa29.55■■■□□ 2.32
MMP17-202ENST00000534865 WRNQ14191 1432 aaPredicted RBP eCLIP29.48■■■□□ 2.31
MMP17-202ENST00000534865 POLA1P09884 1462 aaPredicted RBP29.44■■■□□ 2.3
MMP17-202ENST00000534865 IFT140Q96RY7 1462 aa29.42■■■□□ 2.3
MMP17-202ENST00000534865 FGD5Q6ZNL6 1462 aa29.41■■■□□ 2.3
MMP17-202ENST00000534865 TOP2BQ02880 1626 aa29.39■■■□□ 2.3
MMP17-202ENST00000534865 BIVM-ERCC5R4GMW8 1640 aa29.39■■■□□ 2.3
MMP17-202ENST00000534865 SYNJ1O43426 1573 aa29.39■■■□□ 2.29
MMP17-202ENST00000534865 TARBP1Q13395 1621 aaKnown RBP29.33■■■□□ 2.29
MMP17-202ENST00000534865 SOGA1O94964 1423 aa29.31■■■□□ 2.28
MMP17-202ENST00000534865 RAD54L2Q9Y4B4 1467 aa29.29■■■□□ 2.28
MMP17-202ENST00000534865 ZNF608Q9ULD9 1512 aaPredicted RBP29.24■■■□□ 2.27
MMP17-202ENST00000534865 WDR97A6NE52 1622 aa29.19■■■□□ 2.26
MMP17-202ENST00000534865 EIF4G3O43432 1585 aaKnown RBP29.18■■■□□ 2.26
MMP17-202ENST00000534865 ABCA10Q8WWZ4 1543 aa29.14■■■□□ 2.26
MMP17-202ENST00000534865 AQRO60306 1485 aaKnown RBP eCLIP29.11■■■□□ 2.252e-6■■■■□ 20.4
MMP17-202ENST00000534865 TDRD9Q8NDG6 1382 aaKnown RBP29.1■■■□□ 2.25
MMP17-202ENST00000534865 ABCA5Q8WWZ7 1642 aa29.01■■■□□ 2.24
MMP17-202ENST00000534865 GAPVD1Q14C86 1478 aa29■■■□□ 2.23
MMP17-202ENST00000534865 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
MMP17-202ENST00000534865 GRIN2BQ13224 1484 aa28.96■■■□□ 2.23
MMP17-202ENST00000534865 PBRM1Q86U86 1689 aa28.95■■■□□ 2.22
MMP17-202ENST00000534865 SNAPC4Q5SXM2 1469 aa28.87■■■□□ 2.21
MMP17-202ENST00000534865 MAGI1Q96QZ7 1491 aaPredicted RBP28.86■■■□□ 2.21
MMP17-202ENST00000534865 KIF27Q86VH2 1401 aa28.85■■■□□ 2.21
MMP17-202ENST00000534865 ERICH3Q5RHP9 1530 aa28.81■■■□□ 2.2
MMP17-202ENST00000534865 CHD1O14646 1710 aa28.77■■■□□ 2.2
MMP17-202ENST00000534865 CHIC1Q5VXU3 224 aa28.77■■■□□ 2.2
MMP17-202ENST00000534865 SYNJ2O15056 1496 aa28.73■■■□□ 2.19
MMP17-202ENST00000534865 FBLN2P98095 1184 aa28.73■■■□□ 2.19
MMP17-202ENST00000534865 ADAMTS12P58397 1594 aa28.72■■■□□ 2.19
MMP17-202ENST00000534865 CHMP7Q8WUX9 453 aaPredicted RBP28.69■■■□□ 2.18
MMP17-202ENST00000534865 OSCARQ8IYS5 282 aa28.69■■■□□ 2.18
MMP17-202ENST00000534865 FHAD1B1AJZ9 1412 aa28.67■■■□□ 2.18
MMP17-202ENST00000534865 IGF1RP08069 1367 aa28.65■■■□□ 2.18
MMP17-202ENST00000534865 CUL7Q14999 1698 aa28.63■■■□□ 2.17
MMP17-202ENST00000534865 RUSC2Q8N2Y8 1516 aa28.62■■■□□ 2.17
MMP17-202ENST00000534865 DNAJC5Q9H3Z4 198 aa28.59■■■□□ 2.17
MMP17-202ENST00000534865 GRIN2AQ12879 1464 aa28.58■■■□□ 2.17
MMP17-202ENST00000534865 CARMIL1Q5VZK9 1371 aa28.51■■■□□ 2.15
MMP17-202ENST00000534865 EEA1Q15075 1411 aa28.49■■■□□ 2.15
MMP17-202ENST00000534865 NUP160Q12769 1436 aa28.43■■■□□ 2.14
MMP17-202ENST00000534865 CLASP1Q7Z460 1538 aa28.43■■■□□ 2.14
MMP17-202ENST00000534865 CEP170Q5SW79 1584 aa28.43■■■□□ 2.14
MMP17-202ENST00000534865 RAPGEF2Q9Y4G8 1499 aa28.39■■■□□ 2.13
MMP17-202ENST00000534865 CSRNP3Q8WYN3 585 aa28.38■■■□□ 2.13
MMP17-202ENST00000534865 FAM9AQ8IZU1 332 aaPredicted RBP28.35■■■□□ 2.13
MMP17-202ENST00000534865 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
MMP17-202ENST00000534865 KIAA0586Q9BVV6 1533 aa28.24■■■□□ 2.11
MMP17-202ENST00000534865 ARHGEF11O15085 1522 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms