RNA–Protein interactions for RNA: ENST00000534446.1

LONRF1-209, Transcript of LON peptidase N-terminal domain and ring finger 1, humanhuman

TSL 3

Gene LONRF1, Length 679 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF1-209ENST00000534446 NISCHQ9Y2I1 1504 aa23.98■■□□□ 1.43
LONRF1-209ENST00000534446 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
LONRF1-209ENST00000534446 ABCC9O60706 1549 aa20.7■□□□□ 0.9
LONRF1-209ENST00000534446 ZCCHC6Q5VYS8 1495 aaKnown RBP20.02■□□□□ 0.8
LONRF1-209ENST00000534446 NACADO15069 1562 aa19.95■□□□□ 0.78
LONRF1-209ENST00000534446 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
LONRF1-209ENST00000534446 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
LONRF1-209ENST00000534446 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
LONRF1-209ENST00000534446 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
LONRF1-209ENST00000534446 PABPN1Q86U42 306 aaKnown RBP eCLIP19.4■□□□□ 0.7
LONRF1-209ENST00000534446 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.7
LONRF1-209ENST00000534446 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
LONRF1-209ENST00000534446 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
LONRF1-209ENST00000534446 SHROOM4Q9ULL8 1493 aa19.18■□□□□ 0.66
LONRF1-209ENST00000534446 DNAJC5BQ9UF47 199 aa18.99■□□□□ 0.63
LONRF1-209ENST00000534446 EIF4G1Q04637 1599 aaKnown RBP18.83■□□□□ 0.6
LONRF1-209ENST00000534446 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.59
LONRF1-209ENST00000534446 CECR2Q9BXF3 1484 aa18.7■□□□□ 0.58
LONRF1-209ENST00000534446 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
LONRF1-209ENST00000534446 SMARCA4P51532 1647 aa18.55■□□□□ 0.56
LONRF1-209ENST00000534446 MROH2BQ7Z745 1585 aa18.49■□□□□ 0.55
LONRF1-209ENST00000534446 ATAD2BQ9ULI0 1458 aa18.48■□□□□ 0.55
LONRF1-209ENST00000534446 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
LONRF1-209ENST00000534446 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
LONRF1-209ENST00000534446 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
LONRF1-209ENST00000534446 HMGXB3Q12766 1538 aa18.34■□□□□ 0.53
LONRF1-209ENST00000534446 RSF1Q96T23 1441 aaPredicted RBP18.34■□□□□ 0.53
LONRF1-209ENST00000534446 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
LONRF1-209ENST00000534446 WIZO95785 1651 aa18.23■□□□□ 0.51
LONRF1-209ENST00000534446 TOP2AP11388 1531 aaKnown RBP18.08■□□□□ 0.49
LONRF1-209ENST00000534446 NESP48681 1621 aa17.96■□□□□ 0.47
LONRF1-209ENST00000534446 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
LONRF1-209ENST00000534446 SUPT5HO00267 1087 aaKnown RBP17.9■□□□□ 0.46
LONRF1-209ENST00000534446 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
LONRF1-209ENST00000534446 LAMC3Q9Y6N6 1575 aa17.89■□□□□ 0.45
LONRF1-209ENST00000534446 CFTRP13569 1480 aa17.84■□□□□ 0.45
LONRF1-209ENST00000534446 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
LONRF1-209ENST00000534446 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
LONRF1-209ENST00000534446 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
LONRF1-209ENST00000534446 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.42
LONRF1-209ENST00000534446 CEP164Q9UPV0 1460 aa17.64■□□□□ 0.41
LONRF1-209ENST00000534446 THOC2Q8NI27 1593 aaKnown RBP17.64■□□□□ 0.41
LONRF1-209ENST00000534446 CUX2O14529 1486 aa17.63■□□□□ 0.41
LONRF1-209ENST00000534446 MRC2Q9UBG0 1479 aa17.62■□□□□ 0.41
LONRF1-209ENST00000534446 WDR62O43379 1518 aa17.56■□□□□ 0.4
LONRF1-209ENST00000534446 PRDM2Q13029 1718 aa17.54■□□□□ 0.4
LONRF1-209ENST00000534446 URB2Q14146 1524 aaKnown RBP17.52■□□□□ 0.4
LONRF1-209ENST00000534446 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
LONRF1-209ENST00000534446 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
LONRF1-209ENST00000534446 DNMBPQ6XZF7 1577 aa17.39■□□□□ 0.37
LONRF1-209ENST00000534446 CUX1P39880 1505 aa17.33■□□□□ 0.37
LONRF1-209ENST00000534446 POLA1P09884 1462 aaPredicted RBP17.3■□□□□ 0.36
LONRF1-209ENST00000534446 IFT140Q96RY7 1462 aa17.3■□□□□ 0.36
LONRF1-209ENST00000534446 WRNQ14191 1432 aaPredicted RBP eCLIP17.26■□□□□ 0.35
LONRF1-209ENST00000534446 FGD5Q6ZNL6 1462 aa17.25■□□□□ 0.35
LONRF1-209ENST00000534446 RAD54L2Q9Y4B4 1467 aa17.22■□□□□ 0.35
LONRF1-209ENST00000534446 SOGA1O94964 1423 aa17.21■□□□□ 0.35
LONRF1-209ENST00000534446 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.35
LONRF1-209ENST00000534446 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
LONRF1-209ENST00000534446 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
LONRF1-209ENST00000534446 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
LONRF1-209ENST00000534446 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
LONRF1-209ENST00000534446 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
LONRF1-209ENST00000534446 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
LONRF1-209ENST00000534446 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
LONRF1-209ENST00000534446 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
LONRF1-209ENST00000534446 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
LONRF1-209ENST00000534446 GAPVD1Q14C86 1478 aa17.01■□□□□ 0.31
LONRF1-209ENST00000534446 GRIN2BQ13224 1484 aa17■□□□□ 0.31
LONRF1-209ENST00000534446 DNAJC5Q9H3Z4 198 aa16.99■□□□□ 0.31
LONRF1-209ENST00000534446 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
LONRF1-209ENST00000534446 SNAPC4Q5SXM2 1469 aa16.97■□□□□ 0.31
LONRF1-209ENST00000534446 MAGI1Q96QZ7 1491 aaPredicted RBP16.94■□□□□ 0.3
LONRF1-209ENST00000534446 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
LONRF1-209ENST00000534446 TRIM41Q8WV44 630 aa16.89■□□□□ 0.29
LONRF1-209ENST00000534446 KIF27Q86VH2 1401 aa16.88■□□□□ 0.29
LONRF1-209ENST00000534446 ERICH3Q5RHP9 1530 aa16.88■□□□□ 0.29
LONRF1-209ENST00000534446 SYNJ2O15056 1496 aa16.87■□□□□ 0.29
LONRF1-209ENST00000534446 PBRM1Q86U86 1689 aa16.87■□□□□ 0.29
LONRF1-209ENST00000534446 FBLN2P98095 1184 aa16.86■□□□□ 0.29
LONRF1-209ENST00000534446 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
LONRF1-209ENST00000534446 IGF1RP08069 1367 aa16.85■□□□□ 0.29
LONRF1-209ENST00000534446 FHAD1B1AJZ9 1412 aa16.83■□□□□ 0.28
LONRF1-209ENST00000534446 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
LONRF1-209ENST00000534446 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
LONRF1-209ENST00000534446 CHD1O14646 1710 aa16.79■□□□□ 0.28
LONRF1-209ENST00000534446 RUSC2Q8N2Y8 1516 aa16.78■□□□□ 0.28
LONRF1-209ENST00000534446 GRIN2AQ12879 1464 aa16.78■□□□□ 0.28
LONRF1-209ENST00000534446 NUP160Q12769 1436 aa16.74■□□□□ 0.27
LONRF1-209ENST00000534446 CLASP1Q7Z460 1538 aa16.72■□□□□ 0.27
LONRF1-209ENST00000534446 CARMIL1Q5VZK9 1371 aa16.72■□□□□ 0.27
LONRF1-209ENST00000534446 CUL7Q14999 1698 aa16.69■□□□□ 0.26
LONRF1-209ENST00000534446 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
LONRF1-209ENST00000534446 EEA1Q15075 1411 aa16.63■□□□□ 0.25
LONRF1-209ENST00000534446 PRXQ9BXM0 1461 aa16.63■□□□□ 0.25
LONRF1-209ENST00000534446 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
LONRF1-209ENST00000534446 RAPGEF2Q9Y4G8 1499 aa16.62■□□□□ 0.25
LONRF1-209ENST00000534446 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
LONRF1-209ENST00000534446 KIAA0586Q9BVV6 1533 aa16.58■□□□□ 0.24
LONRF1-209ENST00000534446 RIMBP3CA6NJZ7 1639 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms