RNA–Protein interactions for RNA: ENST00000534417.1

TTC17-215, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 2

Gene TTC17, Length 823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-215ENST00000534417 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
TTC17-215ENST00000534417 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
TTC17-215ENST00000534417 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
TTC17-215ENST00000534417 DCAF1Q9Y4B6 1507 aa18.91■□□□□ 0.62
TTC17-215ENST00000534417 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
TTC17-215ENST00000534417 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
TTC17-215ENST00000534417 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
TTC17-215ENST00000534417 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
TTC17-215ENST00000534417 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
TTC17-215ENST00000534417 ABCC9O60706 1549 aa18.13■□□□□ 0.49
TTC17-215ENST00000534417 NACADO15069 1562 aa18.12■□□□□ 0.49
TTC17-215ENST00000534417 SCRIBQ14160 1630 aa17.98■□□□□ 0.47
TTC17-215ENST00000534417 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
TTC17-215ENST00000534417 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
TTC17-215ENST00000534417 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
TTC17-215ENST00000534417 CECR2Q9BXF3 1484 aa17.54■□□□□ 0.4
TTC17-215ENST00000534417 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
TTC17-215ENST00000534417 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.39
TTC17-215ENST00000534417 BAZ1AQ9NRL2 1556 aaPredicted RBP17.5■□□□□ 0.39
TTC17-215ENST00000534417 WIZO95785 1651 aa17.42■□□□□ 0.38
TTC17-215ENST00000534417 SMARCA4P51532 1647 aa17.37■□□□□ 0.37
TTC17-215ENST00000534417 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
TTC17-215ENST00000534417 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
TTC17-215ENST00000534417 BICRAQ9NZM4 1560 aa17.29■□□□□ 0.36
TTC17-215ENST00000534417 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.35
TTC17-215ENST00000534417 SMARCA2P51531 1590 aa17.16■□□□□ 0.34
TTC17-215ENST00000534417 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
TTC17-215ENST00000534417 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
TTC17-215ENST00000534417 LOC105371045A0A1W2PR82 267 aa17.07■□□□□ 0.32
TTC17-215ENST00000534417 HRCP23327 699 aa16.96■□□□□ 0.31
TTC17-215ENST00000534417 ATAD2BQ9ULI0 1458 aa16.89■□□□□ 0.29
TTC17-215ENST00000534417 PCGF6Q9BYE7 350 aa16.86■□□□□ 0.29
TTC17-215ENST00000534417 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
TTC17-215ENST00000534417 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
TTC17-215ENST00000534417 EEA1Q15075 1411 aa16.85■□□□□ 0.29
TTC17-215ENST00000534417 TRIM26Q12899 539 aaPredicted RBP16.83■□□□□ 0.28
TTC17-215ENST00000534417 BAZ1BQ9UIG0 1483 aaKnown RBP16.8■□□□□ 0.28
TTC17-215ENST00000534417 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
TTC17-215ENST00000534417 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
TTC17-215ENST00000534417 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
TTC17-215ENST00000534417 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
TTC17-215ENST00000534417 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
TTC17-215ENST00000534417 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
TTC17-215ENST00000534417 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.25
TTC17-215ENST00000534417 SOGA1O94964 1423 aa16.63■□□□□ 0.25
TTC17-215ENST00000534417 KIF21BO75037 1637 aa16.63■□□□□ 0.25
TTC17-215ENST00000534417 BIVM-ERCC5R4GMW8 1640 aa16.62■□□□□ 0.25
TTC17-215ENST00000534417 TOP2BQ02880 1626 aa16.6■□□□□ 0.25
TTC17-215ENST00000534417 GOLGA3Q08378 1498 aa16.58■□□□□ 0.24
TTC17-215ENST00000534417 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
TTC17-215ENST00000534417 RUSC2Q8N2Y8 1516 aa16.55■□□□□ 0.24
TTC17-215ENST00000534417 CEP162Q5TB80 1403 aa16.54■□□□□ 0.24
TTC17-215ENST00000534417 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
TTC17-215ENST00000534417 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
TTC17-215ENST00000534417 ZEB1P37275 1124 aaPredicted RBP16.5■□□□□ 0.23
TTC17-215ENST00000534417 CFTRP13569 1480 aa16.47■□□□□ 0.23
TTC17-215ENST00000534417 ERICH3Q5RHP9 1530 aa16.41■□□□□ 0.22
TTC17-215ENST00000534417 CUX1P39880 1505 aa16.37■□□□□ 0.21
TTC17-215ENST00000534417 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
TTC17-215ENST00000534417 PPARGC1BQ86YN6 1023 aaKnown RBP16.34■□□□□ 0.21
TTC17-215ENST00000534417 PRXQ9BXM0 1461 aa16.33■□□□□ 0.2
TTC17-215ENST00000534417 RAPGEF2Q9Y4G8 1499 aa16.3■□□□□ 0.2
TTC17-215ENST00000534417 CLIP1P30622 1438 aa16.29■□□□□ 0.2
TTC17-215ENST00000534417 UBTFP17480 764 aaKnown RBP16.28■□□□□ 0.2
TTC17-215ENST00000534417 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
TTC17-215ENST00000534417 CC2D2AQ9P2K1 1620 aa16.26■□□□□ 0.19
TTC17-215ENST00000534417 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
TTC17-215ENST00000534417 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
TTC17-215ENST00000534417 POTEDQ86YR6 584 aa16.19■□□□□ 0.18
TTC17-215ENST00000534417 SENP3Q9H4L4 574 aaPredicted RBP16.17■□□□□ 0.18
TTC17-215ENST00000534417 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
TTC17-215ENST00000534417 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
TTC17-215ENST00000534417 FGD5Q6ZNL6 1462 aa16.08■□□□□ 0.16
TTC17-215ENST00000534417 FANCD2Q9BXW9 1451 aa16.06■□□□□ 0.16
TTC17-215ENST00000534417 LAMC3Q9Y6N6 1575 aa16.05■□□□□ 0.16
TTC17-215ENST00000534417 CUX2O14529 1486 aa16.04■□□□□ 0.16
TTC17-215ENST00000534417 IGF1RP08069 1367 aa16.02■□□□□ 0.16
TTC17-215ENST00000534417 MAP3K1Q13233 1512 aa16■□□□□ 0.15
TTC17-215ENST00000534417 ABCA10Q8WWZ4 1543 aa16■□□□□ 0.15
TTC17-215ENST00000534417 ARHGAP35Q9NRY4 1499 aa16■□□□□ 0.15
TTC17-215ENST00000534417 WDR97A6NE52 1622 aa15.99■□□□□ 0.15
TTC17-215ENST00000534417 CCER1Q8TC90 406 aaPredicted RBP15.99■□□□□ 0.15
TTC17-215ENST00000534417 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
TTC17-215ENST00000534417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
TTC17-215ENST00000534417 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
TTC17-215ENST00000534417 CUL7Q14999 1698 aa15.97■□□□□ 0.15
TTC17-215ENST00000534417 POLA1P09884 1462 aaPredicted RBP15.93■□□□□ 0.14
TTC17-215ENST00000534417 CARMIL1Q5VZK9 1371 aa15.93■□□□□ 0.14
TTC17-215ENST00000534417 APLP2Q06481 763 aa15.93■□□□□ 0.14
TTC17-215ENST00000534417 RRBP1Q9P2E9 1410 aaKnown RBP15.9■□□□□ 0.14
TTC17-215ENST00000534417 EFCAB5A4FU69 1503 aa15.88■□□□□ 0.13
TTC17-215ENST00000534417 NESP48681 1621 aa15.87■□□□□ 0.13
TTC17-215ENST00000534417 ABCA5Q8WWZ7 1642 aa15.87■□□□□ 0.13
TTC17-215ENST00000534417 CFAP43Q8NDM7 1665 aa15.87■□□□□ 0.13
TTC17-215ENST00000534417 CTTNBP2Q8WZ74 1663 aa15.87■□□□□ 0.13
TTC17-215ENST00000534417 TIAM1Q13009 1591 aa15.87■□□□□ 0.13
TTC17-215ENST00000534417 URB2Q14146 1524 aaKnown RBP15.86■□□□□ 0.13
TTC17-215ENST00000534417 TTBK1Q5TCY1 1321 aaPredicted RBP15.84■□□□□ 0.13
TTC17-215ENST00000534417 CLSPNQ9HAW4 1339 aa15.82■□□□□ 0.12
TTC17-215ENST00000534417 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms