RNA–Protein interactions for RNA: ENST00000534267.5

CDKL1-209, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 2

Gene CDKL1, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-209ENST00000534267 AEBP2Q6ZN18 517 aaPredicted RBP22.22■■□□□ 1.15
CDKL1-209ENST00000534267 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
CDKL1-209ENST00000534267 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
CDKL1-209ENST00000534267 CCDC180Q9P1Z9 1646 aa19.26■□□□□ 0.67
CDKL1-209ENST00000534267 SENP3Q9H4L4 574 aaPredicted RBP18.8■□□□□ 0.6
CDKL1-209ENST00000534267 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
CDKL1-209ENST00000534267 ABCC9O60706 1549 aa18.65■□□□□ 0.58
CDKL1-209ENST00000534267 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.53
CDKL1-209ENST00000534267 MYO15BQ96JP2 1530 aa18.23■□□□□ 0.51
CDKL1-209ENST00000534267 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
CDKL1-209ENST00000534267 NACADO15069 1562 aa18.15■□□□□ 0.5
CDKL1-209ENST00000534267 DCAF8L2P0C7V8 631 aa18.14■□□□□ 0.49
CDKL1-209ENST00000534267 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
CDKL1-209ENST00000534267 FOXD1Q16676 465 aa17.61■□□□□ 0.41
CDKL1-209ENST00000534267 BICRAQ9NZM4 1560 aa17.58■□□□□ 0.41
CDKL1-209ENST00000534267 SCRIBQ14160 1630 aa17.56■□□□□ 0.4
CDKL1-209ENST00000534267 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDKL1-209ENST00000534267 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
CDKL1-209ENST00000534267 SHROOM4Q9ULL8 1493 aa17.42■□□□□ 0.38
CDKL1-209ENST00000534267 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
CDKL1-209ENST00000534267 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
CDKL1-209ENST00000534267 EIF4G1Q04637 1599 aaKnown RBP17.03■□□□□ 0.32
CDKL1-209ENST00000534267 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
CDKL1-209ENST00000534267 MROH2BQ7Z745 1585 aa16.92■□□□□ 0.3
CDKL1-209ENST00000534267 PLPPR3Q6T4P5 718 aa16.9■□□□□ 0.3
CDKL1-209ENST00000534267 SMARCA4P51532 1647 aa16.89■□□□□ 0.29
CDKL1-209ENST00000534267 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
CDKL1-209ENST00000534267 CC2D2AQ9P2K1 1620 aa16.87■□□□□ 0.29
CDKL1-209ENST00000534267 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
CDKL1-209ENST00000534267 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
CDKL1-209ENST00000534267 PEG3Q9GZU2 1588 aa16.82■□□□□ 0.28
CDKL1-209ENST00000534267 SMARCA2P51531 1590 aa16.75■□□□□ 0.27
CDKL1-209ENST00000534267 HMGXB3Q12766 1538 aa16.67■□□□□ 0.26
CDKL1-209ENST00000534267 WIZO95785 1651 aa16.64■□□□□ 0.25
CDKL1-209ENST00000534267 BAZ1BQ9UIG0 1483 aaKnown RBP16.62■□□□□ 0.25
CDKL1-209ENST00000534267 PPP6R1Q9UPN7 881 aa16.61■□□□□ 0.25
CDKL1-209ENST00000534267 ADRA2BP18089 450 aa16.56■□□□□ 0.24
CDKL1-209ENST00000534267 SUPT5HO00267 1087 aaKnown RBP16.53■□□□□ 0.24
CDKL1-209ENST00000534267 TOP2AP11388 1531 aaKnown RBP16.53■□□□□ 0.24
CDKL1-209ENST00000534267 PIAS4Q8N2W9 510 aaPredicted RBP16.47■□□□□ 0.23
CDKL1-209ENST00000534267 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
CDKL1-209ENST00000534267 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
CDKL1-209ENST00000534267 MSH5O43196 834 aa16.32■□□□□ 0.2
CDKL1-209ENST00000534267 CFTRP13569 1480 aa16.3■□□□□ 0.2
CDKL1-209ENST00000534267 NESP48681 1621 aa16.26■□□□□ 0.19
CDKL1-209ENST00000534267 LAMC3Q9Y6N6 1575 aa16.21■□□□□ 0.19
CDKL1-209ENST00000534267 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
CDKL1-209ENST00000534267 FANCD2Q9BXW9 1451 aa16.08■□□□□ 0.16
CDKL1-209ENST00000534267 ERCC6Q03468 1493 aa15.99■□□□□ 0.15
CDKL1-209ENST00000534267 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
CDKL1-209ENST00000534267 MRC2Q9UBG0 1479 aa15.94■□□□□ 0.14
CDKL1-209ENST00000534267 URB2Q14146 1524 aaKnown RBP15.93■□□□□ 0.14
CDKL1-209ENST00000534267 KIF21AQ7Z4S6 1674 aa15.92■□□□□ 0.14
CDKL1-209ENST00000534267 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
CDKL1-209ENST00000534267 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
CDKL1-209ENST00000534267 WDR62O43379 1518 aa15.89■□□□□ 0.13
CDKL1-209ENST00000534267 ABCC8Q09428 1581 aa15.87■□□□□ 0.13
CDKL1-209ENST00000534267 TOPBP1Q92547 1522 aa15.85■□□□□ 0.13
CDKL1-209ENST00000534267 POTEDQ86YR6 584 aa15.85■□□□□ 0.13
CDKL1-209ENST00000534267 CUX1P39880 1505 aa15.84■□□□□ 0.13
CDKL1-209ENST00000534267 WRNQ14191 1432 aaPredicted RBP eCLIP15.83■□□□□ 0.12
CDKL1-209ENST00000534267 CUX2O14529 1486 aa15.83■□□□□ 0.12
CDKL1-209ENST00000534267 DNMBPQ6XZF7 1577 aa15.8■□□□□ 0.12
CDKL1-209ENST00000534267 POLA1P09884 1462 aaPredicted RBP15.75■□□□□ 0.11
CDKL1-209ENST00000534267 TOP2BQ02880 1626 aa15.73■□□□□ 0.11
CDKL1-209ENST00000534267 SYNJ1O43426 1573 aa15.73■□□□□ 0.11
CDKL1-209ENST00000534267 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.11
CDKL1-209ENST00000534267 SOGA1O94964 1423 aa15.7■□□□□ 0.1
CDKL1-209ENST00000534267 IFT140Q96RY7 1462 aa15.69■□□□□ 0.1
CDKL1-209ENST00000534267 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
CDKL1-209ENST00000534267 RAD54L2Q9Y4B4 1467 aa15.67■□□□□ 0.1
CDKL1-209ENST00000534267 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
CDKL1-209ENST00000534267 TRIM41Q8WV44 630 aa15.64■□□□□ 0.09
CDKL1-209ENST00000534267 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
CDKL1-209ENST00000534267 ZNF608Q9ULD9 1512 aaPredicted RBP15.61■□□□□ 0.09
CDKL1-209ENST00000534267 TDRD9Q8NDG6 1382 aaKnown RBP15.6■□□□□ 0.09
CDKL1-209ENST00000534267 AQRO60306 1485 aaKnown RBP eCLIP15.57■□□□□ 0.08
CDKL1-209ENST00000534267 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
CDKL1-209ENST00000534267 IGF1RP08069 1367 aa15.5■□□□□ 0.07
CDKL1-209ENST00000534267 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
CDKL1-209ENST00000534267 KIF27Q86VH2 1401 aa15.48■□□□□ 0.07
CDKL1-209ENST00000534267 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.07
CDKL1-209ENST00000534267 GRIN2BQ13224 1484 aa15.46■□□□□ 0.07
CDKL1-209ENST00000534267 RUSC2Q8N2Y8 1516 aa15.45■□□□□ 0.06
CDKL1-209ENST00000534267 EIF4G3O43432 1585 aaKnown RBP15.44■□□□□ 0.06
CDKL1-209ENST00000534267 ERICH3Q5RHP9 1530 aa15.41■□□□□ 0.06
CDKL1-209ENST00000534267 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
CDKL1-209ENST00000534267 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
CDKL1-209ENST00000534267 EEA1Q15075 1411 aa15.36■□□□□ 0.05
CDKL1-209ENST00000534267 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
CDKL1-209ENST00000534267 FHAD1B1AJZ9 1412 aa15.35■□□□□ 0.05
CDKL1-209ENST00000534267 CARMIL1Q5VZK9 1371 aa15.34■□□□□ 0.05
CDKL1-209ENST00000534267 SYNJ2O15056 1496 aa15.33■□□□□ 0.05
CDKL1-209ENST00000534267 PRXQ9BXM0 1461 aa15.33■□□□□ 0.04
CDKL1-209ENST00000534267 CHMP7Q8WUX9 453 aaPredicted RBP15.3■□□□□ 0.04
CDKL1-209ENST00000534267 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
CDKL1-209ENST00000534267 ADAMTS12P58397 1594 aa15.27■□□□□ 0.03
CDKL1-209ENST00000534267 PBRM1Q86U86 1689 aa15.26■□□□□ 0.03
CDKL1-209ENST00000534267 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
CDKL1-209ENST00000534267 NUP160Q12769 1436 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms