RNA–Protein interactions for RNA: ENST00000534114.5

IFT46-211, Transcript of intraflagellar transport 46, humanhuman

TSL 3

Gene IFT46, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-211ENST00000534114 NISCHQ9Y2I1 1504 aa23.3■■□□□ 1.32
IFT46-211ENST00000534114 CCDC180Q9P1Z9 1646 aa20.43■□□□□ 0.86
IFT46-211ENST00000534114 ZCCHC6Q5VYS8 1495 aaKnown RBP19.58■□□□□ 0.72
IFT46-211ENST00000534114 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
IFT46-211ENST00000534114 MYO15BQ96JP2 1530 aa19.3■□□□□ 0.68
IFT46-211ENST00000534114 ABCC9O60706 1549 aa19.15■□□□□ 0.66
IFT46-211ENST00000534114 NACADO15069 1562 aa19.07■□□□□ 0.64
IFT46-211ENST00000534114 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
IFT46-211ENST00000534114 RB1CC1Q8TDY2 1594 aa18.87■□□□□ 0.61
IFT46-211ENST00000534114 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
IFT46-211ENST00000534114 SCRIBQ14160 1630 aa18.54■□□□□ 0.56
IFT46-211ENST00000534114 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
IFT46-211ENST00000534114 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
IFT46-211ENST00000534114 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
IFT46-211ENST00000534114 RSF1Q96T23 1441 aaPredicted RBP18.01■□□□□ 0.47
IFT46-211ENST00000534114 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
IFT46-211ENST00000534114 CECR2Q9BXF3 1484 aa17.98■□□□□ 0.47
IFT46-211ENST00000534114 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
IFT46-211ENST00000534114 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
IFT46-211ENST00000534114 SMARCA4P51532 1647 aa17.89■□□□□ 0.45
IFT46-211ENST00000534114 PEG3Q9GZU2 1588 aa17.82■□□□□ 0.44
IFT46-211ENST00000534114 SMARCA2P51531 1590 aa17.71■□□□□ 0.43
IFT46-211ENST00000534114 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
IFT46-211ENST00000534114 WIZO95785 1651 aa17.68■□□□□ 0.42
IFT46-211ENST00000534114 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
IFT46-211ENST00000534114 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
IFT46-211ENST00000534114 NCAPD3P42695 1498 aa17.6■□□□□ 0.41
IFT46-211ENST00000534114 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
IFT46-211ENST00000534114 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
IFT46-211ENST00000534114 CCDC88BA6NC98 1476 aa17.41■□□□□ 0.38
IFT46-211ENST00000534114 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
IFT46-211ENST00000534114 CHIC1Q5VXU3 224 aa17.24■□□□□ 0.35
IFT46-211ENST00000534114 CFTRP13569 1480 aa17.15■□□□□ 0.34
IFT46-211ENST00000534114 CADPSQ9ULU8 1353 aa17.09■□□□□ 0.33
IFT46-211ENST00000534114 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
IFT46-211ENST00000534114 LAMC3Q9Y6N6 1575 aa16.99■□□□□ 0.31
IFT46-211ENST00000534114 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
IFT46-211ENST00000534114 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.31
IFT46-211ENST00000534114 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
IFT46-211ENST00000534114 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
IFT46-211ENST00000534114 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
IFT46-211ENST00000534114 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
IFT46-211ENST00000534114 FANCD2Q9BXW9 1451 aa16.85■□□□□ 0.29
IFT46-211ENST00000534114 EEA1Q15075 1411 aa16.83■□□□□ 0.28
IFT46-211ENST00000534114 BIVM-ERCC5R4GMW8 1640 aa16.82■□□□□ 0.28
IFT46-211ENST00000534114 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
IFT46-211ENST00000534114 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
IFT46-211ENST00000534114 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.28
IFT46-211ENST00000534114 NESP48681 1621 aa16.77■□□□□ 0.27
IFT46-211ENST00000534114 CUX1P39880 1505 aa16.76■□□□□ 0.27
IFT46-211ENST00000534114 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
IFT46-211ENST00000534114 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
IFT46-211ENST00000534114 SOGA1O94964 1423 aa16.61■□□□□ 0.25
IFT46-211ENST00000534114 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
IFT46-211ENST00000534114 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
IFT46-211ENST00000534114 FGD5Q6ZNL6 1462 aa16.6■□□□□ 0.25
IFT46-211ENST00000534114 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
IFT46-211ENST00000534114 KIF27Q86VH2 1401 aa16.58■□□□□ 0.24
IFT46-211ENST00000534114 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.24
IFT46-211ENST00000534114 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
IFT46-211ENST00000534114 ABCA10Q8WWZ4 1543 aa16.55■□□□□ 0.24
IFT46-211ENST00000534114 WDR62O43379 1518 aa16.54■□□□□ 0.24
IFT46-211ENST00000534114 ERCC6Q03468 1493 aa16.5■□□□□ 0.23
IFT46-211ENST00000534114 KIF21BO75037 1637 aa16.49■□□□□ 0.23
IFT46-211ENST00000534114 RUSC2Q8N2Y8 1516 aa16.49■□□□□ 0.23
IFT46-211ENST00000534114 FAM9AQ8IZU1 332 aaPredicted RBP16.47■□□□□ 0.23
IFT46-211ENST00000534114 WDR97A6NE52 1622 aa16.47■□□□□ 0.23
IFT46-211ENST00000534114 CUX2O14529 1486 aa16.47■□□□□ 0.23
IFT46-211ENST00000534114 PRXQ9BXM0 1461 aa16.46■□□□□ 0.23
IFT46-211ENST00000534114 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
IFT46-211ENST00000534114 GOLGA3Q08378 1498 aa16.45■□□□□ 0.22
IFT46-211ENST00000534114 THOC2Q8NI27 1593 aaKnown RBP16.44■□□□□ 0.22
IFT46-211ENST00000534114 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
IFT46-211ENST00000534114 LOC105371045A0A1W2PR82 267 aa16.42■□□□□ 0.22
IFT46-211ENST00000534114 IGF1RP08069 1367 aa16.41■□□□□ 0.22
IFT46-211ENST00000534114 TNIKQ9UKE5 1360 aa16.41■□□□□ 0.22
IFT46-211ENST00000534114 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
IFT46-211ENST00000534114 RAD54L2Q9Y4B4 1467 aa16.4■□□□□ 0.22
IFT46-211ENST00000534114 ABCA5Q8WWZ7 1642 aa16.37■□□□□ 0.21
IFT46-211ENST00000534114 CUL7Q14999 1698 aa16.34■□□□□ 0.21
IFT46-211ENST00000534114 GAPVD1Q14C86 1478 aa16.33■□□□□ 0.2
IFT46-211ENST00000534114 RAPGEF2Q9Y4G8 1499 aa16.31■□□□□ 0.2
IFT46-211ENST00000534114 CARMIL1Q5VZK9 1371 aa16.31■□□□□ 0.2
IFT46-211ENST00000534114 GRIN2BQ13224 1484 aa16.27■□□□□ 0.19
IFT46-211ENST00000534114 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
IFT46-211ENST00000534114 UBTFP17480 764 aaKnown RBP16.25■□□□□ 0.19
IFT46-211ENST00000534114 CEP162Q5TB80 1403 aa16.24■□□□□ 0.19
IFT46-211ENST00000534114 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.19
IFT46-211ENST00000534114 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
IFT46-211ENST00000534114 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.18
IFT46-211ENST00000534114 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
IFT46-211ENST00000534114 PBRM1Q86U86 1689 aa16.17■□□□□ 0.18
IFT46-211ENST00000534114 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
IFT46-211ENST00000534114 ADAMTS12P58397 1594 aa16.15■□□□□ 0.18
IFT46-211ENST00000534114 CLIP1P30622 1438 aa16.14■□□□□ 0.17
IFT46-211ENST00000534114 SYNJ2O15056 1496 aa16.08■□□□□ 0.16
IFT46-211ENST00000534114 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
IFT46-211ENST00000534114 SNAPC4Q5SXM2 1469 aa16.07■□□□□ 0.16
IFT46-211ENST00000534114 EFCAB5A4FU69 1503 aa16.06■□□□□ 0.16
IFT46-211ENST00000534114 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms