RNA–Protein interactions for RNA: ENST00000533332.1

SYT13-203, Transcript of synaptotagmin 13, humanhuman

TSL 1 (best)

Gene SYT13, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT13-203ENST00000533332 NISCHQ9Y2I1 1504 aa37.26■■■■□ 3.56
SYT13-203ENST00000533332 CCDC180Q9P1Z9 1646 aa32.96■■■□□ 2.87
SYT13-203ENST00000533332 ABCC9O60706 1549 aa31.93■■■□□ 2.7
SYT13-203ENST00000533332 ZCCHC6Q5VYS8 1495 aaKnown RBP31.08■■■□□ 2.57
SYT13-203ENST00000533332 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
SYT13-203ENST00000533332 NACADO15069 1562 aa30.98■■■□□ 2.55
SYT13-203ENST00000533332 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.55
SYT13-203ENST00000533332 RB1CC1Q8TDY2 1594 aa30.91■■■□□ 2.54
SYT13-203ENST00000533332 DCAF1Q9Y4B6 1507 aa30.9■■■□□ 2.54
SYT13-203ENST00000533332 UNC13AQ9UPW8 1703 aa30.19■■■□□ 2.42
SYT13-203ENST00000533332 SCRIBQ14160 1630 aa30.02■■■□□ 2.4
SYT13-203ENST00000533332 PABPN1Q86U42 306 aaKnown RBP eCLIP29.92■■■□□ 2.38
SYT13-203ENST00000533332 BICRAQ9NZM4 1560 aa29.91■■■□□ 2.38
SYT13-203ENST00000533332 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
SYT13-203ENST00000533332 EIF4G1Q04637 1599 aaKnown RBP29.12■■■□□ 2.25
SYT13-203ENST00000533332 DNAJC5BQ9UF47 199 aa29.07■■■□□ 2.24
SYT13-203ENST00000533332 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.22
SYT13-203ENST00000533332 CC2D2AQ9P2K1 1620 aa28.9■■■□□ 2.22
SYT13-203ENST00000533332 BAZ1AQ9NRL2 1556 aaPredicted RBP28.87■■■□□ 2.21
SYT13-203ENST00000533332 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
SYT13-203ENST00000533332 MROH2BQ7Z745 1585 aa28.68■■■□□ 2.18
SYT13-203ENST00000533332 ATAD2BQ9ULI0 1458 aa28.62■■■□□ 2.17
SYT13-203ENST00000533332 SMARCA2P51531 1590 aa28.61■■■□□ 2.17
SYT13-203ENST00000533332 NCAPD3P42695 1498 aa28.61■■■□□ 2.17
SYT13-203ENST00000533332 PEG3Q9GZU2 1588 aa28.58■■■□□ 2.17
SYT13-203ENST00000533332 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
SYT13-203ENST00000533332 HMGXB3Q12766 1538 aa28.44■■■□□ 2.14
SYT13-203ENST00000533332 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.13
SYT13-203ENST00000533332 WIZO95785 1651 aa28.34■■■□□ 2.13
SYT13-203ENST00000533332 TOP2AP11388 1531 aaKnown RBP28.11■■■□□ 2.09
SYT13-203ENST00000533332 SUPT5HO00267 1087 aaKnown RBP27.99■■■□□ 2.07
SYT13-203ENST00000533332 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
SYT13-203ENST00000533332 CADPSQ9ULU8 1353 aa27.79■■■□□ 2.04
SYT13-203ENST00000533332 LAMC3Q9Y6N6 1575 aa27.76■■■□□ 2.03
SYT13-203ENST00000533332 NESP48681 1621 aa27.7■■■□□ 2.03
SYT13-203ENST00000533332 CFTRP13569 1480 aa27.68■■■□□ 2.02
SYT13-203ENST00000533332 PDS5BQ9NTI5 1447 aa27.61■■■□□ 2.01
SYT13-203ENST00000533332 ERCC6Q03468 1493 aa27.54■■■□□ 2
SYT13-203ENST00000533332 FANCD2Q9BXW9 1451 aa27.41■■□□□ 1.98
SYT13-203ENST00000533332 PRDM2Q13029 1718 aa27.4■■□□□ 1.98
SYT13-203ENST00000533332 KIF21AQ7Z4S6 1674 aa27.39■■□□□ 1.98
SYT13-203ENST00000533332 CEP164Q9UPV0 1460 aa27.35■■□□□ 1.97
SYT13-203ENST00000533332 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
SYT13-203ENST00000533332 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
SYT13-203ENST00000533332 CUX2O14529 1486 aa27.18■■□□□ 1.94
SYT13-203ENST00000533332 WDR62O43379 1518 aa27.14■■□□□ 1.94
SYT13-203ENST00000533332 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
SYT13-203ENST00000533332 URB2Q14146 1524 aaKnown RBP27.09■■□□□ 1.93
SYT13-203ENST00000533332 TOPBP1Q92547 1522 aa26.99■■□□□ 1.91
SYT13-203ENST00000533332 DNMBPQ6XZF7 1577 aa26.99■■□□□ 1.91
SYT13-203ENST00000533332 CUX1P39880 1505 aa26.88■■□□□ 1.89
SYT13-203ENST00000533332 WRNQ14191 1432 aaPredicted RBP eCLIP26.88■■□□□ 1.89
SYT13-203ENST00000533332 IFT140Q96RY7 1462 aa26.8■■□□□ 1.88
SYT13-203ENST00000533332 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
SYT13-203ENST00000533332 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
SYT13-203ENST00000533332 FGD5Q6ZNL6 1462 aa26.75■■□□□ 1.87
SYT13-203ENST00000533332 SOGA1O94964 1423 aa26.73■■□□□ 1.87
SYT13-203ENST00000533332 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
SYT13-203ENST00000533332 SYNJ1O43426 1573 aa26.71■■□□□ 1.87
SYT13-203ENST00000533332 TARBP1Q13395 1621 aaKnown RBP26.67■■□□□ 1.86
SYT13-203ENST00000533332 RAD54L2Q9Y4B4 1467 aa26.64■■□□□ 1.86
SYT13-203ENST00000533332 ZNF608Q9ULD9 1512 aaPredicted RBP26.58■■□□□ 1.85
SYT13-203ENST00000533332 ABCA10Q8WWZ4 1543 aa26.56■■□□□ 1.84
SYT13-203ENST00000533332 WDR97A6NE52 1622 aa26.54■■□□□ 1.84
SYT13-203ENST00000533332 TDRD9Q8NDG6 1382 aaKnown RBP26.51■■□□□ 1.83
SYT13-203ENST00000533332 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.83
SYT13-203ENST00000533332 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
SYT13-203ENST00000533332 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
SYT13-203ENST00000533332 GAPVD1Q14C86 1478 aa26.41■■□□□ 1.82
SYT13-203ENST00000533332 GRIN2BQ13224 1484 aa26.37■■□□□ 1.81
SYT13-203ENST00000533332 ABCA5Q8WWZ7 1642 aa26.36■■□□□ 1.81
SYT13-203ENST00000533332 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
SYT13-203ENST00000533332 KIF27Q86VH2 1401 aa26.32■■□□□ 1.8
SYT13-203ENST00000533332 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
SYT13-203ENST00000533332 ERICH3Q5RHP9 1530 aa26.25■■□□□ 1.79
SYT13-203ENST00000533332 PBRM1Q86U86 1689 aa26.25■■□□□ 1.79
SYT13-203ENST00000533332 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
SYT13-203ENST00000533332 IGF1RP08069 1367 aa26.18■■□□□ 1.78
SYT13-203ENST00000533332 OSCARQ8IYS5 282 aa26.17■■□□□ 1.78
SYT13-203ENST00000533332 CHMP7Q8WUX9 453 aaPredicted RBP26.17■■□□□ 1.78
SYT13-203ENST00000533332 SYNJ2O15056 1496 aa26.16■■□□□ 1.78
SYT13-203ENST00000533332 FBLN2P98095 1184 aa26.14■■□□□ 1.78
SYT13-203ENST00000533332 FHAD1B1AJZ9 1412 aa26.14■■□□□ 1.77
SYT13-203ENST00000533332 CHD1O14646 1710 aa26.08■■□□□ 1.77
SYT13-203ENST00000533332 RUSC2Q8N2Y8 1516 aa26.08■■□□□ 1.77
SYT13-203ENST00000533332 ADAMTS12P58397 1594 aa26.07■■□□□ 1.76
SYT13-203ENST00000533332 EEA1Q15075 1411 aa26.05■■□□□ 1.76
SYT13-203ENST00000533332 DNAJC5Q9H3Z4 198 aa26.03■■□□□ 1.76
SYT13-203ENST00000533332 CUL7Q14999 1698 aa26.03■■□□□ 1.76
SYT13-203ENST00000533332 CARMIL1Q5VZK9 1371 aa26.02■■□□□ 1.76
SYT13-203ENST00000533332 GRIN2AQ12879 1464 aa26.01■■□□□ 1.75
SYT13-203ENST00000533332 CSRNP3Q8WYN3 585 aa25.97■■□□□ 1.75
SYT13-203ENST00000533332 NUP160Q12769 1436 aa25.9■■□□□ 1.74
SYT13-203ENST00000533332 RAPGEF2Q9Y4G8 1499 aa25.89■■□□□ 1.73
SYT13-203ENST00000533332 PRXQ9BXM0 1461 aa25.88■■□□□ 1.73
SYT13-203ENST00000533332 FAM9AQ8IZU1 332 aaPredicted RBP25.83■■□□□ 1.73
SYT13-203ENST00000533332 CLASP1Q7Z460 1538 aa25.82■■□□□ 1.72
SYT13-203ENST00000533332 CEP170Q5SW79 1584 aa25.81■■□□□ 1.72
SYT13-203ENST00000533332 KIAA0586Q9BVV6 1533 aa25.76■■□□□ 1.71
SYT13-203ENST00000533332 JPH4Q96JJ6 628 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms