RNA–Protein interactions for RNA: ENST00000532962.5

ALKBH3-210, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 1 (best)

Gene ALKBH3, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-210ENST00000532962 NISCHQ9Y2I1 1504 aa41.24■■■■■ 4.19
ALKBH3-210ENST00000532962 CCDC180Q9P1Z9 1646 aa36.04■■■■□ 3.36
ALKBH3-210ENST00000532962 ZCCHC6Q5VYS8 1495 aaKnown RBP34.59■■■■□ 3.13
ALKBH3-210ENST00000532962 DCAF8L2P0C7V8 631 aa34.17■■■■□ 3.06
ALKBH3-210ENST00000532962 ABCC9O60706 1549 aa34.15■■■■□ 3.06
ALKBH3-210ENST00000532962 DCAF1Q9Y4B6 1507 aa34.11■■■■□ 3.05
ALKBH3-210ENST00000532962 MYO15BQ96JP2 1530 aa33.75■■■□□ 2.99
ALKBH3-210ENST00000532962 NACADO15069 1562 aa33.61■■■□□ 2.97
ALKBH3-210ENST00000532962 SHROOM4Q9ULL8 1493 aa33.57■■■□□ 2.96
ALKBH3-210ENST00000532962 RB1CC1Q8TDY2 1594 aa33.35■■■□□ 2.93
ALKBH3-210ENST00000532962 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
ALKBH3-210ENST00000532962 UNC13AQ9UPW8 1703 aa32.62■■■□□ 2.81
ALKBH3-210ENST00000532962 SUPT5HO00267 1087 aaKnown RBP32.29■■■□□ 2.76
ALKBH3-210ENST00000532962 BICRAQ9NZM4 1560 aa32.26■■■□□ 2.76
ALKBH3-210ENST00000532962 PABPN1Q86U42 306 aaKnown RBP eCLIP32.19■■■□□ 2.74
ALKBH3-210ENST00000532962 DNAJC5BQ9UF47 199 aa32.1■■■□□ 2.73
ALKBH3-210ENST00000532962 CECR2Q9BXF3 1484 aa32.01■■■□□ 2.72
ALKBH3-210ENST00000532962 RSF1Q96T23 1441 aaPredicted RBP31.93■■■□□ 2.7
ALKBH3-210ENST00000532962 BAZ1AQ9NRL2 1556 aaPredicted RBP31.87■■■□□ 2.69
ALKBH3-210ENST00000532962 MROH2BQ7Z745 1585 aa31.84■■■□□ 2.69
ALKBH3-210ENST00000532962 SMARCA4P51532 1647 aa31.72■■■□□ 2.67
ALKBH3-210ENST00000532962 WIZO95785 1651 aa31.59■■■□□ 2.65
ALKBH3-210ENST00000532962 EIF4G1Q04637 1599 aaKnown RBP31.32■■■□□ 2.61
ALKBH3-210ENST00000532962 PEG3Q9GZU2 1588 aa31.32■■■□□ 2.61
ALKBH3-210ENST00000532962 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
ALKBH3-210ENST00000532962 SMARCA2P51531 1590 aa31.25■■■□□ 2.59
ALKBH3-210ENST00000532962 ATAD2BQ9ULI0 1458 aa31.22■■■□□ 2.59
ALKBH3-210ENST00000532962 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
ALKBH3-210ENST00000532962 NCAPD3P42695 1498 aa30.99■■■□□ 2.55
ALKBH3-210ENST00000532962 CCDC88BA6NC98 1476 aa30.95■■■□□ 2.54
ALKBH3-210ENST00000532962 HMGXB3Q12766 1538 aa30.93■■■□□ 2.54
ALKBH3-210ENST00000532962 CC2D2AQ9P2K1 1620 aa30.9■■■□□ 2.54
ALKBH3-210ENST00000532962 CHIC1Q5VXU3 224 aa30.82■■■□□ 2.52
ALKBH3-210ENST00000532962 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
ALKBH3-210ENST00000532962 CFTRP13569 1480 aa30.26■■■□□ 2.43
ALKBH3-210ENST00000532962 ABCC8Q09428 1581 aa30.23■■■□□ 2.43
ALKBH3-210ENST00000532962 CADPSQ9ULU8 1353 aa30.2■■■□□ 2.42
ALKBH3-210ENST00000532962 PRDM2Q13029 1718 aa30.14■■■□□ 2.42
ALKBH3-210ENST00000532962 WRNQ14191 1432 aaPredicted RBP eCLIP30.09■■■□□ 2.41
ALKBH3-210ENST00000532962 LAMC3Q9Y6N6 1575 aa29.97■■■□□ 2.39
ALKBH3-210ENST00000532962 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
ALKBH3-210ENST00000532962 NESP48681 1621 aa29.92■■■□□ 2.38
ALKBH3-210ENST00000532962 FANCD2Q9BXW9 1451 aa29.86■■■□□ 2.37
ALKBH3-210ENST00000532962 TOP2BQ02880 1626 aa29.85■■■□□ 2.37
ALKBH3-210ENST00000532962 BIVM-ERCC5R4GMW8 1640 aa29.82■■■□□ 2.36
ALKBH3-210ENST00000532962 FAM9AQ8IZU1 332 aaPredicted RBP29.81■■■□□ 2.36
ALKBH3-210ENST00000532962 CUX1P39880 1505 aa29.79■■■□□ 2.36
ALKBH3-210ENST00000532962 PDS5BQ9NTI5 1447 aa29.78■■■□□ 2.36
ALKBH3-210ENST00000532962 CEP164Q9UPV0 1460 aa29.7■■■□□ 2.34
ALKBH3-210ENST00000532962 EEA1Q15075 1411 aa29.66■■■□□ 2.34
ALKBH3-210ENST00000532962 SOGA1O94964 1423 aa29.65■■■□□ 2.34
ALKBH3-210ENST00000532962 LOC105371045A0A1W2PR82 267 aa29.64■■■□□ 2.34
ALKBH3-210ENST00000532962 KIF21AQ7Z4S6 1674 aa29.59■■■□□ 2.33
ALKBH3-210ENST00000532962 DNMBPQ6XZF7 1577 aa29.58■■■□□ 2.33
ALKBH3-210ENST00000532962 RUSC2Q8N2Y8 1516 aa29.52■■■□□ 2.32
ALKBH3-210ENST00000532962 TOPBP1Q92547 1522 aa29.52■■■□□ 2.32
ALKBH3-210ENST00000532962 CSRNP3Q8WYN3 585 aa29.5■■■□□ 2.31
ALKBH3-210ENST00000532962 FGD5Q6ZNL6 1462 aa29.49■■■□□ 2.31
ALKBH3-210ENST00000532962 URB2Q14146 1524 aaKnown RBP29.47■■■□□ 2.31
ALKBH3-210ENST00000532962 EHMT2Q96KQ7 1210 aa29.39■■■□□ 2.29
ALKBH3-210ENST00000532962 KIF27Q86VH2 1401 aa29.38■■■□□ 2.29
ALKBH3-210ENST00000532962 ERCC6Q03468 1493 aa29.38■■■□□ 2.29
ALKBH3-210ENST00000532962 MRC2Q9UBG0 1479 aa29.37■■■□□ 2.29
ALKBH3-210ENST00000532962 POLA1P09884 1462 aaPredicted RBP29.34■■■□□ 2.29
ALKBH3-210ENST00000532962 DNAJC5Q9H3Z4 198 aa29.31■■■□□ 2.28
ALKBH3-210ENST00000532962 CUX2O14529 1486 aa29.3■■■□□ 2.28
ALKBH3-210ENST00000532962 RAD54L2Q9Y4B4 1467 aa29.26■■■□□ 2.27
ALKBH3-210ENST00000532962 KIF21BO75037 1637 aa29.23■■■□□ 2.27
ALKBH3-210ENST00000532962 ABCA10Q8WWZ4 1543 aa29.23■■■□□ 2.27
ALKBH3-210ENST00000532962 GOLGA3Q08378 1498 aa29.22■■■□□ 2.27
ALKBH3-210ENST00000532962 WDR62O43379 1518 aa29.18■■■□□ 2.26
ALKBH3-210ENST00000532962 UBTFP17480 764 aaKnown RBP29.14■■■□□ 2.26
ALKBH3-210ENST00000532962 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
ALKBH3-210ENST00000532962 TNIKQ9UKE5 1360 aa29.11■■■□□ 2.25
ALKBH3-210ENST00000532962 THOC2Q8NI27 1593 aaKnown RBP29.1■■■□□ 2.25
ALKBH3-210ENST00000532962 PRXQ9BXM0 1461 aa29.1■■■□□ 2.25
ALKBH3-210ENST00000532962 IGF1RP08069 1367 aa29.09■■■□□ 2.25
ALKBH3-210ENST00000532962 TARBP1Q13395 1621 aaKnown RBP29.07■■■□□ 2.24
ALKBH3-210ENST00000532962 ERICH3Q5RHP9 1530 aa29.06■■■□□ 2.24
ALKBH3-210ENST00000532962 RAPGEF2Q9Y4G8 1499 aa29.06■■■□□ 2.24
ALKBH3-210ENST00000532962 IFT140Q96RY7 1462 aa29■■■□□ 2.23
ALKBH3-210ENST00000532962 TDRD9Q8NDG6 1382 aaKnown RBP28.99■■■□□ 2.23
ALKBH3-210ENST00000532962 ABCA5Q8WWZ7 1642 aa28.99■■■□□ 2.23
ALKBH3-210ENST00000532962 CARMIL1Q5VZK9 1371 aa28.97■■■□□ 2.23
ALKBH3-210ENST00000532962 GAPVD1Q14C86 1478 aa28.97■■■□□ 2.23
ALKBH3-210ENST00000532962 CEP162Q5TB80 1403 aa28.91■■■□□ 2.22
ALKBH3-210ENST00000532962 CUL7Q14999 1698 aa28.91■■■□□ 2.22
ALKBH3-210ENST00000532962 AQRO60306 1485 aaKnown RBP eCLIP28.82■■■□□ 2.22e-6■■■■■ 36
ALKBH3-210ENST00000532962 PBRM1Q86U86 1689 aa28.81■■■□□ 2.2
ALKBH3-210ENST00000532962 ZNF608Q9ULD9 1512 aaPredicted RBP28.79■■■□□ 2.2
ALKBH3-210ENST00000532962 GRIN2BQ13224 1484 aa28.77■■■□□ 2.2
ALKBH3-210ENST00000532962 CLIP1P30622 1438 aa28.74■■■□□ 2.19
ALKBH3-210ENST00000532962 EIF4G3O43432 1585 aaKnown RBP28.7■■■□□ 2.19
ALKBH3-210ENST00000532962 RANGAP1P46060 587 aaPredicted RBP28.67■■■□□ 2.18
ALKBH3-210ENST00000532962 FHAD1B1AJZ9 1412 aa28.66■■■□□ 2.18
ALKBH3-210ENST00000532962 ADAMTS12P58397 1594 aa28.62■■■□□ 2.17
ALKBH3-210ENST00000532962 SNAPC4Q5SXM2 1469 aa28.57■■■□□ 2.16
ALKBH3-210ENST00000532962 CTTNBP2Q8WZ74 1663 aa28.57■■■□□ 2.16
ALKBH3-210ENST00000532962 MAGI1Q96QZ7 1491 aaPredicted RBP28.53■■■□□ 2.16
ALKBH3-210ENST00000532962 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms