RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
TRAF3IP2-212ENST00000532708 CCDC180Q9P1Z9 1646 aa25.14■■□□□ 1.62
TRAF3IP2-212ENST00000532708 ABCC9O60706 1549 aa24.5■■□□□ 1.51
TRAF3IP2-212ENST00000532708 DCAF8L2P0C7V8 631 aa23.84■■□□□ 1.41
TRAF3IP2-212ENST00000532708 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
TRAF3IP2-212ENST00000532708 NACADO15069 1562 aa23.61■■□□□ 1.37
TRAF3IP2-212ENST00000532708 RB1CC1Q8TDY2 1594 aa23.59■■□□□ 1.37
TRAF3IP2-212ENST00000532708 MYO15BQ96JP2 1530 aa23.5■■□□□ 1.35
TRAF3IP2-212ENST00000532708 DCAF1Q9Y4B6 1507 aa23.5■■□□□ 1.35
TRAF3IP2-212ENST00000532708 UNC13AQ9UPW8 1703 aa23.1■■□□□ 1.29
TRAF3IP2-212ENST00000532708 SCRIBQ14160 1630 aa23.06■■□□□ 1.28
TRAF3IP2-212ENST00000532708 PABPN1Q86U42 306 aaKnown RBP eCLIP22.99■■□□□ 1.27
TRAF3IP2-212ENST00000532708 BICRAQ9NZM4 1560 aa22.9■■□□□ 1.26
TRAF3IP2-212ENST00000532708 SHROOM4Q9ULL8 1493 aa22.76■■□□□ 1.23
TRAF3IP2-212ENST00000532708 DNAJC5BQ9UF47 199 aa22.33■■□□□ 1.17
TRAF3IP2-212ENST00000532708 EIF4G1Q04637 1599 aaKnown RBP22.27■■□□□ 1.16
TRAF3IP2-212ENST00000532708 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
TRAF3IP2-212ENST00000532708 CC2D2AQ9P2K1 1620 aa22.14■■□□□ 1.13
TRAF3IP2-212ENST00000532708 SMARCA4P51532 1647 aa22.04■■□□□ 1.12
TRAF3IP2-212ENST00000532708 BAZ1AQ9NRL2 1556 aaPredicted RBP22.03■■□□□ 1.12
TRAF3IP2-212ENST00000532708 MROH2BQ7Z745 1585 aa21.98■■□□□ 1.11
TRAF3IP2-212ENST00000532708 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
TRAF3IP2-212ENST00000532708 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
TRAF3IP2-212ENST00000532708 RSF1Q96T23 1441 aaPredicted RBP21.81■■□□□ 1.08
TRAF3IP2-212ENST00000532708 NCAPD3P42695 1498 aa21.8■■□□□ 1.08
TRAF3IP2-212ENST00000532708 PEG3Q9GZU2 1588 aa21.78■■□□□ 1.08
TRAF3IP2-212ENST00000532708 WIZO95785 1651 aa21.76■■□□□ 1.07
TRAF3IP2-212ENST00000532708 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
TRAF3IP2-212ENST00000532708 HMGXB3Q12766 1538 aa21.69■■□□□ 1.06
TRAF3IP2-212ENST00000532708 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
TRAF3IP2-212ENST00000532708 TOP2AP11388 1531 aaKnown RBP21.49■■□□□ 1.03
TRAF3IP2-212ENST00000532708 CCDC88BA6NC98 1476 aa21.29■■□□□ 1
TRAF3IP2-212ENST00000532708 NESP48681 1621 aa21.28■■□□□ 1
TRAF3IP2-212ENST00000532708 CADPSQ9ULU8 1353 aa21.2■□□□□ 0.98
TRAF3IP2-212ENST00000532708 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
TRAF3IP2-212ENST00000532708 CFTRP13569 1480 aa21.11■□□□□ 0.97
TRAF3IP2-212ENST00000532708 ERCC6Q03468 1493 aa21.08■□□□□ 0.96
TRAF3IP2-212ENST00000532708 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
TRAF3IP2-212ENST00000532708 KIF21AQ7Z4S6 1674 aa21■□□□□ 0.95
TRAF3IP2-212ENST00000532708 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
TRAF3IP2-212ENST00000532708 PRDM2Q13029 1718 aa20.94■□□□□ 0.94
TRAF3IP2-212ENST00000532708 CEP164Q9UPV0 1460 aa20.9■□□□□ 0.94
TRAF3IP2-212ENST00000532708 THOC2Q8NI27 1593 aaKnown RBP20.84■□□□□ 0.93
TRAF3IP2-212ENST00000532708 MRC2Q9UBG0 1479 aa20.81■□□□□ 0.92
TRAF3IP2-212ENST00000532708 URB2Q14146 1524 aaKnown RBP20.75■□□□□ 0.91
TRAF3IP2-212ENST00000532708 WDR62O43379 1518 aa20.73■□□□□ 0.91
TRAF3IP2-212ENST00000532708 CUX2O14529 1486 aa20.71■□□□□ 0.91
TRAF3IP2-212ENST00000532708 TOPBP1Q92547 1522 aa20.66■□□□□ 0.9
TRAF3IP2-212ENST00000532708 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
TRAF3IP2-212ENST00000532708 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
TRAF3IP2-212ENST00000532708 CUX1P39880 1505 aa20.6■□□□□ 0.89
TRAF3IP2-212ENST00000532708 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
TRAF3IP2-212ENST00000532708 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
TRAF3IP2-212ENST00000532708 SYNJ1O43426 1573 aa20.49■□□□□ 0.87
TRAF3IP2-212ENST00000532708 FGD5Q6ZNL6 1462 aa20.49■□□□□ 0.87
TRAF3IP2-212ENST00000532708 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
TRAF3IP2-212ENST00000532708 RAD54L2Q9Y4B4 1467 aa20.45■□□□□ 0.86
TRAF3IP2-212ENST00000532708 IFT140Q96RY7 1462 aa20.44■□□□□ 0.86
TRAF3IP2-212ENST00000532708 BIVM-ERCC5R4GMW8 1640 aa20.44■□□□□ 0.86
TRAF3IP2-212ENST00000532708 SOGA1O94964 1423 aa20.44■□□□□ 0.86
TRAF3IP2-212ENST00000532708 TARBP1Q13395 1621 aaKnown RBP20.4■□□□□ 0.86
TRAF3IP2-212ENST00000532708 ZNF608Q9ULD9 1512 aaPredicted RBP20.39■□□□□ 0.85
TRAF3IP2-212ENST00000532708 TDRD9Q8NDG6 1382 aaKnown RBP20.33■□□□□ 0.84
TRAF3IP2-212ENST00000532708 AQRO60306 1485 aaKnown RBP eCLIP20.32■□□□□ 0.84
TRAF3IP2-212ENST00000532708 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
TRAF3IP2-212ENST00000532708 EIF4G3O43432 1585 aaKnown RBP20.28■□□□□ 0.84
TRAF3IP2-212ENST00000532708 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.83
TRAF3IP2-212ENST00000532708 WDR97A6NE52 1622 aa20.27■□□□□ 0.83
TRAF3IP2-212ENST00000532708 GAPVD1Q14C86 1478 aa20.19■□□□□ 0.82
TRAF3IP2-212ENST00000532708 CHIC1Q5VXU3 224 aa20.19■□□□□ 0.82
TRAF3IP2-212ENST00000532708 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
TRAF3IP2-212ENST00000532708 GRIN2BQ13224 1484 aa20.13■□□□□ 0.81
TRAF3IP2-212ENST00000532708 PBRM1Q86U86 1689 aa20.11■□□□□ 0.81
TRAF3IP2-212ENST00000532708 SNAPC4Q5SXM2 1469 aa20.1■□□□□ 0.81
TRAF3IP2-212ENST00000532708 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
TRAF3IP2-212ENST00000532708 FBLN2P98095 1184 aa20.07■□□□□ 0.8
TRAF3IP2-212ENST00000532708 RUSC2Q8N2Y8 1516 aa20.05■□□□□ 0.8
TRAF3IP2-212ENST00000532708 MAGI1Q96QZ7 1491 aaPredicted RBP20.04■□□□□ 0.8
TRAF3IP2-212ENST00000532708 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.8
TRAF3IP2-212ENST00000532708 IGF1RP08069 1367 aa20.01■□□□□ 0.79
TRAF3IP2-212ENST00000532708 CHMP7Q8WUX9 453 aaPredicted RBP20.01■□□□□ 0.79
TRAF3IP2-212ENST00000532708 CHD1O14646 1710 aa19.99■□□□□ 0.79
TRAF3IP2-212ENST00000532708 OSCARQ8IYS5 282 aa19.97■□□□□ 0.79
TRAF3IP2-212ENST00000532708 SYNJ2O15056 1496 aa19.97■□□□□ 0.79
TRAF3IP2-212ENST00000532708 ADAMTS12P58397 1594 aa19.96■□□□□ 0.79
TRAF3IP2-212ENST00000532708 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
TRAF3IP2-212ENST00000532708 FAM9AQ8IZU1 332 aaPredicted RBP19.92■□□□□ 0.78
TRAF3IP2-212ENST00000532708 CARMIL1Q5VZK9 1371 aa19.89■□□□□ 0.77
TRAF3IP2-212ENST00000532708 GRIN2AQ12879 1464 aa19.89■□□□□ 0.77
TRAF3IP2-212ENST00000532708 CUL7Q14999 1698 aa19.88■□□□□ 0.77
TRAF3IP2-212ENST00000532708 DNAJC5Q9H3Z4 198 aa19.87■□□□□ 0.77
TRAF3IP2-212ENST00000532708 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
TRAF3IP2-212ENST00000532708 EEA1Q15075 1411 aa19.82■□□□□ 0.76
TRAF3IP2-212ENST00000532708 CEP170Q5SW79 1584 aa19.79■□□□□ 0.76
TRAF3IP2-212ENST00000532708 RAPGEF2Q9Y4G8 1499 aa19.78■□□□□ 0.76
TRAF3IP2-212ENST00000532708 NUP160Q12769 1436 aa19.77■□□□□ 0.76
TRAF3IP2-212ENST00000532708 PRXQ9BXM0 1461 aa19.76■□□□□ 0.75
TRAF3IP2-212ENST00000532708 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
TRAF3IP2-212ENST00000532708 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
TRAF3IP2-212ENST00000532708 KIAA0586Q9BVV6 1533 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms