RNA–Protein interactions for RNA: ENST00000531950.1

HHLA3-207, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HHLA3, Length 541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-207ENST00000531950 NISCHQ9Y2I1 1504 aa18.2■□□□□ 0.5
HHLA3-207ENST00000531950 CCDC180Q9P1Z9 1646 aa15.92■□□□□ 0.14
HHLA3-207ENST00000531950 ABCC9O60706 1549 aa15.58■□□□□ 0.09
HHLA3-207ENST00000531950 DCAF8L2P0C7V8 631 aa15.29■□□□□ 0.04
HHLA3-207ENST00000531950 ZCCHC6Q5VYS8 1495 aaKnown RBP15.19■□□□□ 0.02
HHLA3-207ENST00000531950 NACADO15069 1562 aa15□□□□□ -0.01
HHLA3-207ENST00000531950 DCAF1Q9Y4B6 1507 aa15□□□□□ -0.01
HHLA3-207ENST00000531950 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
HHLA3-207ENST00000531950 RB1CC1Q8TDY2 1594 aa14.96□□□□□ -0.01
HHLA3-207ENST00000531950 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
HHLA3-207ENST00000531950 SCRIBQ14160 1630 aa14.69□□□□□ -0.06
HHLA3-207ENST00000531950 SHROOM4Q9ULL8 1493 aa14.67□□□□□ -0.06
HHLA3-207ENST00000531950 BICRAQ9NZM4 1560 aa14.55□□□□□ -0.08
HHLA3-207ENST00000531950 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.08
HHLA3-207ENST00000531950 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
HHLA3-207ENST00000531950 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
HHLA3-207ENST00000531950 EIF4G1Q04637 1599 aaKnown RBP14.13□□□□□ -0.15
HHLA3-207ENST00000531950 MROH2BQ7Z745 1585 aa14.07□□□□□ -0.16
HHLA3-207ENST00000531950 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
HHLA3-207ENST00000531950 SMARCA4P51532 1647 aa14.02□□□□□ -0.16
HHLA3-207ENST00000531950 CC2D2AQ9P2K1 1620 aa14.02□□□□□ -0.16
HHLA3-207ENST00000531950 RSF1Q96T23 1441 aaPredicted RBP14.02□□□□□ -0.16
HHLA3-207ENST00000531950 ATAD2BQ9ULI0 1458 aa13.97□□□□□ -0.17
HHLA3-207ENST00000531950 SUPT5HO00267 1087 aaKnown RBP13.92□□□□□ -0.18
HHLA3-207ENST00000531950 NCAPD3P42695 1498 aa13.91□□□□□ -0.18
HHLA3-207ENST00000531950 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
HHLA3-207ENST00000531950 WIZO95785 1651 aa13.87□□□□□ -0.19
HHLA3-207ENST00000531950 PEG3Q9GZU2 1588 aa13.86□□□□□ -0.19
HHLA3-207ENST00000531950 BAZ1BQ9UIG0 1483 aaKnown RBP13.84□□□□□ -0.19
HHLA3-207ENST00000531950 HMGXB3Q12766 1538 aa13.79□□□□□ -0.2
HHLA3-207ENST00000531950 TOP2AP11388 1531 aaKnown RBP13.73□□□□□ -0.21
HHLA3-207ENST00000531950 CCDC88BA6NC98 1476 aa13.65□□□□□ -0.22
HHLA3-207ENST00000531950 NESP48681 1621 aa13.56□□□□□ -0.24
HHLA3-207ENST00000531950 CADPSQ9ULU8 1353 aa13.56□□□□□ -0.24
HHLA3-207ENST00000531950 CFTRP13569 1480 aa13.49□□□□□ -0.25
HHLA3-207ENST00000531950 AEBP2Q6ZN18 517 aaPredicted RBP13.43□□□□□ -0.26
HHLA3-207ENST00000531950 LAMC3Q9Y6N6 1575 aa13.42□□□□□ -0.26
HHLA3-207ENST00000531950 PDS5BQ9NTI5 1447 aa13.4□□□□□ -0.26
HHLA3-207ENST00000531950 CHIC1Q5VXU3 224 aa13.38□□□□□ -0.27
HHLA3-207ENST00000531950 ERCC6Q03468 1493 aa13.37□□□□□ -0.27
HHLA3-207ENST00000531950 FANCD2Q9BXW9 1451 aa13.37□□□□□ -0.27
HHLA3-207ENST00000531950 CEP164Q9UPV0 1460 aa13.3□□□□□ -0.28
HHLA3-207ENST00000531950 KIF21AQ7Z4S6 1674 aa13.25□□□□□ -0.29
HHLA3-207ENST00000531950 MRC2Q9UBG0 1479 aa13.24□□□□□ -0.29
HHLA3-207ENST00000531950 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
HHLA3-207ENST00000531950 ABCC8Q09428 1581 aa13.2□□□□□ -0.3
HHLA3-207ENST00000531950 THOC2Q8NI27 1593 aaKnown RBP13.19□□□□□ -0.3
HHLA3-207ENST00000531950 WRNQ14191 1432 aaPredicted RBP eCLIP13.18□□□□□ -0.3
HHLA3-207ENST00000531950 CUX1P39880 1505 aa13.18□□□□□ -0.3
HHLA3-207ENST00000531950 TOPBP1Q92547 1522 aa13.17□□□□□ -0.3
HHLA3-207ENST00000531950 WDR62O43379 1518 aa13.16□□□□□ -0.3
HHLA3-207ENST00000531950 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
HHLA3-207ENST00000531950 DNMBPQ6XZF7 1577 aa13.12□□□□□ -0.31
HHLA3-207ENST00000531950 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
HHLA3-207ENST00000531950 CUX2O14529 1486 aa13.1□□□□□ -0.31
HHLA3-207ENST00000531950 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
HHLA3-207ENST00000531950 POLA1P09884 1462 aaPredicted RBP13.09□□□□□ -0.31
HHLA3-207ENST00000531950 FGD5Q6ZNL6 1462 aa13.09□□□□□ -0.31
HHLA3-207ENST00000531950 RAD54L2Q9Y4B4 1467 aa13.09□□□□□ -0.31
HHLA3-207ENST00000531950 SOGA1O94964 1423 aa13.07□□□□□ -0.32
HHLA3-207ENST00000531950 TOP2BQ02880 1626 aa13.05□□□□□ -0.32
HHLA3-207ENST00000531950 IFT140Q96RY7 1462 aa13.03□□□□□ -0.32
HHLA3-207ENST00000531950 TDRD9Q8NDG6 1382 aaKnown RBP13.02□□□□□ -0.33
HHLA3-207ENST00000531950 ZNF608Q9ULD9 1512 aaPredicted RBP13.01□□□□□ -0.33
HHLA3-207ENST00000531950 BIVM-ERCC5R4GMW8 1640 aa13□□□□□ -0.33
HHLA3-207ENST00000531950 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.33
HHLA3-207ENST00000531950 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.33
HHLA3-207ENST00000531950 ABCA10Q8WWZ4 1543 aa12.95□□□□□ -0.34
HHLA3-207ENST00000531950 RUSC2Q8N2Y8 1516 aa12.9□□□□□ -0.34
HHLA3-207ENST00000531950 FAM9AQ8IZU1 332 aaPredicted RBP12.89□□□□□ -0.35
HHLA3-207ENST00000531950 GAPVD1Q14C86 1478 aa12.89□□□□□ -0.35
HHLA3-207ENST00000531950 KIF27Q86VH2 1401 aa12.88□□□□□ -0.35
HHLA3-207ENST00000531950 IGF1RP08069 1367 aa12.87□□□□□ -0.35
HHLA3-207ENST00000531950 EIF4G3O43432 1585 aaKnown RBP12.85□□□□□ -0.35
HHLA3-207ENST00000531950 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
HHLA3-207ENST00000531950 WDR97A6NE52 1622 aa12.84□□□□□ -0.35
HHLA3-207ENST00000531950 ABCA5Q8WWZ7 1642 aa12.82□□□□□ -0.36
HHLA3-207ENST00000531950 FBLN2P98095 1184 aa12.82□□□□□ -0.36
HHLA3-207ENST00000531950 SNAPC4Q5SXM2 1469 aa12.82□□□□□ -0.36
HHLA3-207ENST00000531950 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
HHLA3-207ENST00000531950 CHMP7Q8WUX9 453 aaPredicted RBP12.78□□□□□ -0.36
HHLA3-207ENST00000531950 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
HHLA3-207ENST00000531950 ERICH3Q5RHP9 1530 aa12.76□□□□□ -0.37
HHLA3-207ENST00000531950 FHAD1B1AJZ9 1412 aa12.75□□□□□ -0.37
HHLA3-207ENST00000531950 EHMT2Q96KQ7 1210 aa12.75□□□□□ -0.37
HHLA3-207ENST00000531950 MAGI1Q96QZ7 1491 aaPredicted RBP12.75□□□□□ -0.37
HHLA3-207ENST00000531950 EEA1Q15075 1411 aa12.73□□□□□ -0.37
HHLA3-207ENST00000531950 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
HHLA3-207ENST00000531950 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
HHLA3-207ENST00000531950 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
HHLA3-207ENST00000531950 ADAMTS12P58397 1594 aa12.7□□□□□ -0.38
HHLA3-207ENST00000531950 PRXQ9BXM0 1461 aa12.7□□□□□ -0.38
HHLA3-207ENST00000531950 GRIN2AQ12879 1464 aa12.67□□□□□ -0.38
HHLA3-207ENST00000531950 RAPGEF2Q9Y4G8 1499 aa12.67□□□□□ -0.38
HHLA3-207ENST00000531950 LOC105371045A0A1W2PR82 267 aa12.63□□□□□ -0.39
HHLA3-207ENST00000531950 NUP160Q12769 1436 aa12.62□□□□□ -0.39
HHLA3-207ENST00000531950 CUL7Q14999 1698 aa12.62□□□□□ -0.39
HHLA3-207ENST00000531950 UBTFP17480 764 aaKnown RBP12.6□□□□□ -0.39
HHLA3-207ENST00000531950 CHD1O14646 1710 aa12.59□□□□□ -0.39
HHLA3-207ENST00000531950 CEP170Q5SW79 1584 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms