RNA–Protein interactions for RNA: ENST00000531936.1

CNIH2-205, Transcript of cornichon family AMPA receptor auxiliary protein 2, humanhuman

TSL 2

Gene CNIH2, Length 625 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH2-205ENST00000531936 NISCHQ9Y2I1 1504 aa33.44■■■□□ 2.94
CNIH2-205ENST00000531936 CCDC180Q9P1Z9 1646 aa29.51■■■□□ 2.31
CNIH2-205ENST00000531936 ABCC9O60706 1549 aa28.83■■■□□ 2.21
CNIH2-205ENST00000531936 DCAF8L2P0C7V8 631 aa28.06■■■□□ 2.08
CNIH2-205ENST00000531936 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
CNIH2-205ENST00000531936 NACADO15069 1562 aa27.8■■■□□ 2.04
CNIH2-205ENST00000531936 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
CNIH2-205ENST00000531936 MYO15BQ96JP2 1530 aa27.7■■■□□ 2.02
CNIH2-205ENST00000531936 DCAF1Q9Y4B6 1507 aa27.66■■■□□ 2.02
CNIH2-205ENST00000531936 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
CNIH2-205ENST00000531936 SCRIBQ14160 1630 aa27.01■■□□□ 1.92
CNIH2-205ENST00000531936 UNC13AQ9UPW8 1703 aa26.95■■□□□ 1.9
CNIH2-205ENST00000531936 BICRAQ9NZM4 1560 aa26.87■■□□□ 1.89
CNIH2-205ENST00000531936 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
CNIH2-205ENST00000531936 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
CNIH2-205ENST00000531936 EIF4G1Q04637 1599 aaKnown RBP26.18■■□□□ 1.78
CNIH2-205ENST00000531936 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
CNIH2-205ENST00000531936 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
CNIH2-205ENST00000531936 BAZ1AQ9NRL2 1556 aaPredicted RBP25.9■■□□□ 1.74
CNIH2-205ENST00000531936 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
CNIH2-205ENST00000531936 MROH2BQ7Z745 1585 aa25.77■■□□□ 1.72
CNIH2-205ENST00000531936 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
CNIH2-205ENST00000531936 NCAPD3P42695 1498 aa25.7■■□□□ 1.7
CNIH2-205ENST00000531936 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
CNIH2-205ENST00000531936 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
CNIH2-205ENST00000531936 PEG3Q9GZU2 1588 aa25.59■■□□□ 1.69
CNIH2-205ENST00000531936 BAZ1BQ9UIG0 1483 aaKnown RBP25.53■■□□□ 1.68
CNIH2-205ENST00000531936 HMGXB3Q12766 1538 aa25.52■■□□□ 1.68
CNIH2-205ENST00000531936 WIZO95785 1651 aa25.45■■□□□ 1.66
CNIH2-205ENST00000531936 SUPT5HO00267 1087 aaKnown RBP25.23■■□□□ 1.63
CNIH2-205ENST00000531936 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
CNIH2-205ENST00000531936 CADPSQ9ULU8 1353 aa25■■□□□ 1.59
CNIH2-205ENST00000531936 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
CNIH2-205ENST00000531936 NESP48681 1621 aa24.97■■□□□ 1.59
CNIH2-205ENST00000531936 LAMC3Q9Y6N6 1575 aa24.92■■□□□ 1.58
CNIH2-205ENST00000531936 ERCC6Q03468 1493 aa24.86■■□□□ 1.57
CNIH2-205ENST00000531936 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
CNIH2-205ENST00000531936 CFTRP13569 1480 aa24.85■■□□□ 1.57
CNIH2-205ENST00000531936 FANCD2Q9BXW9 1451 aa24.67■■□□□ 1.54
CNIH2-205ENST00000531936 CEP164Q9UPV0 1460 aa24.61■■□□□ 1.53
CNIH2-205ENST00000531936 KIF21AQ7Z4S6 1674 aa24.56■■□□□ 1.52
CNIH2-205ENST00000531936 MRC2Q9UBG0 1479 aa24.52■■□□□ 1.52
CNIH2-205ENST00000531936 CUX2O14529 1486 aa24.47■■□□□ 1.51
CNIH2-205ENST00000531936 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
CNIH2-205ENST00000531936 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
CNIH2-205ENST00000531936 WDR62O43379 1518 aa24.39■■□□□ 1.49
CNIH2-205ENST00000531936 URB2Q14146 1524 aaKnown RBP24.37■■□□□ 1.49
CNIH2-205ENST00000531936 ABCC8Q09428 1581 aa24.33■■□□□ 1.48
CNIH2-205ENST00000531936 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
CNIH2-205ENST00000531936 DNMBPQ6XZF7 1577 aa24.23■■□□□ 1.47
CNIH2-205ENST00000531936 CUX1P39880 1505 aa24.15■■□□□ 1.46
CNIH2-205ENST00000531936 WRNQ14191 1432 aaPredicted RBP eCLIP24.15■■□□□ 1.46
CNIH2-205ENST00000531936 IFT140Q96RY7 1462 aa24.1■■□□□ 1.45
CNIH2-205ENST00000531936 POLA1P09884 1462 aaPredicted RBP24.08■■□□□ 1.45
CNIH2-205ENST00000531936 SOGA1O94964 1423 aa24.07■■□□□ 1.44
CNIH2-205ENST00000531936 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
CNIH2-205ENST00000531936 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
CNIH2-205ENST00000531936 TOP2BQ02880 1626 aa23.98■■□□□ 1.43
CNIH2-205ENST00000531936 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
CNIH2-205ENST00000531936 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
CNIH2-205ENST00000531936 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
CNIH2-205ENST00000531936 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
CNIH2-205ENST00000531936 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
CNIH2-205ENST00000531936 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.42
CNIH2-205ENST00000531936 ABCA10Q8WWZ4 1543 aa23.84■■□□□ 1.41
CNIH2-205ENST00000531936 TRIM41Q8WV44 630 aa23.83■■□□□ 1.41
CNIH2-205ENST00000531936 EIF4G3O43432 1585 aaKnown RBP23.78■■□□□ 1.4
CNIH2-205ENST00000531936 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
CNIH2-205ENST00000531936 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
CNIH2-205ENST00000531936 GRIN2BQ13224 1484 aa23.72■■□□□ 1.39
CNIH2-205ENST00000531936 FBLN2P98095 1184 aa23.66■■□□□ 1.38
CNIH2-205ENST00000531936 KIF27Q86VH2 1401 aa23.65■■□□□ 1.38
CNIH2-205ENST00000531936 ABCA5Q8WWZ7 1642 aa23.64■■□□□ 1.38
CNIH2-205ENST00000531936 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.37
CNIH2-205ENST00000531936 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
CNIH2-205ENST00000531936 OSCARQ8IYS5 282 aa23.63■■□□□ 1.37
CNIH2-205ENST00000531936 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
CNIH2-205ENST00000531936 MAGI1Q96QZ7 1491 aaPredicted RBP23.61■■□□□ 1.37
CNIH2-205ENST00000531936 DNAJC5Q9H3Z4 198 aa23.57■■□□□ 1.36
CNIH2-205ENST00000531936 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
CNIH2-205ENST00000531936 IGF1RP08069 1367 aa23.54■■□□□ 1.36
CNIH2-205ENST00000531936 SYNJ2O15056 1496 aa23.53■■□□□ 1.36
CNIH2-205ENST00000531936 PBRM1Q86U86 1689 aa23.52■■□□□ 1.36
CNIH2-205ENST00000531936 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
CNIH2-205ENST00000531936 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
CNIH2-205ENST00000531936 ADAMTS12P58397 1594 aa23.41■■□□□ 1.34
CNIH2-205ENST00000531936 CARMIL1Q5VZK9 1371 aa23.4■■□□□ 1.34
CNIH2-205ENST00000531936 GRIN2AQ12879 1464 aa23.39■■□□□ 1.34
CNIH2-205ENST00000531936 CHD1O14646 1710 aa23.39■■□□□ 1.33
CNIH2-205ENST00000531936 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
CNIH2-205ENST00000531936 FAM9AQ8IZU1 332 aaPredicted RBP23.33■■□□□ 1.33
CNIH2-205ENST00000531936 EEA1Q15075 1411 aa23.33■■□□□ 1.32
CNIH2-205ENST00000531936 CUL7Q14999 1698 aa23.32■■□□□ 1.32
CNIH2-205ENST00000531936 NUP160Q12769 1436 aa23.28■■□□□ 1.32
CNIH2-205ENST00000531936 RAPGEF2Q9Y4G8 1499 aa23.25■■□□□ 1.31
CNIH2-205ENST00000531936 CLASP1Q7Z460 1538 aa23.22■■□□□ 1.31
CNIH2-205ENST00000531936 PRXQ9BXM0 1461 aa23.21■■□□□ 1.31
CNIH2-205ENST00000531936 CEP170Q5SW79 1584 aa23.21■■□□□ 1.31
CNIH2-205ENST00000531936 JPH4Q96JJ6 628 aa23.16■■□□□ 1.3
CNIH2-205ENST00000531936 KIAA0586Q9BVV6 1533 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms