RNA–Protein interactions for RNA: ENST00000531322.1

CHST1-202, Transcript of carbohydrate sulfotransferase 1, humanhuman

TSL 2

Gene CHST1, Length 1,361 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST1-202ENST00000531322 NISCHQ9Y2I1 1504 aa53.64■■■■■ 6.18
CHST1-202ENST00000531322 CCDC180Q9P1Z9 1646 aa47.53■■■■■ 5.2
CHST1-202ENST00000531322 ABCC9O60706 1549 aa46.18■■■■■ 4.98
CHST1-202ENST00000531322 ZCCHC6Q5VYS8 1495 aaKnown RBP44.73■■■■■ 4.75
CHST1-202ENST00000531322 DCAF8L2P0C7V8 631 aa44.68■■■■■ 4.74
CHST1-202ENST00000531322 NACADO15069 1562 aa44.66■■■■■ 4.74
CHST1-202ENST00000531322 RB1CC1Q8TDY2 1594 aa44.61■■■■■ 4.73
CHST1-202ENST00000531322 MYO15BQ96JP2 1530 aa44.54■■■■■ 4.72
CHST1-202ENST00000531322 DCAF1Q9Y4B6 1507 aa44.45■■■■■ 4.71
CHST1-202ENST00000531322 UNC13AQ9UPW8 1703 aa43.51■■■■■ 4.56
CHST1-202ENST00000531322 SCRIBQ14160 1630 aa43.33■■■■■ 4.53
CHST1-202ENST00000531322 PABPN1Q86U42 306 aaKnown RBP eCLIP43.23■■■■■ 4.51
CHST1-202ENST00000531322 BICRAQ9NZM4 1560 aa43.21■■■■■ 4.51
CHST1-202ENST00000531322 SHROOM4Q9ULL8 1493 aa42.88■■■■■ 4.46
CHST1-202ENST00000531322 DNAJC5BQ9UF47 199 aa42.51■■■■■ 4.4
CHST1-202ENST00000531322 EIF4G1Q04637 1599 aaKnown RBP42.06■■■■■ 4.32
CHST1-202ENST00000531322 CC2D2AQ9P2K1 1620 aa41.8■■■■■ 4.28
CHST1-202ENST00000531322 CECR2Q9BXF3 1484 aa41.72■■■■■ 4.27
CHST1-202ENST00000531322 BAZ1AQ9NRL2 1556 aaPredicted RBP41.56■■■■■ 4.24
CHST1-202ENST00000531322 SMARCA4P51532 1647 aa41.52■■■■■ 4.24
CHST1-202ENST00000531322 MROH2BQ7Z745 1585 aa41.31■■■■■ 4.2
CHST1-202ENST00000531322 ATAD2BQ9ULI0 1458 aa41.26■■■■■ 4.19
CHST1-202ENST00000531322 SMARCA2P51531 1590 aa41.23■■■■■ 4.19
CHST1-202ENST00000531322 NCAPD3P42695 1498 aa41.22■■■■■ 4.19
CHST1-202ENST00000531322 PEG3Q9GZU2 1588 aa41.16■■■■■ 4.18
CHST1-202ENST00000531322 HMGXB3Q12766 1538 aa41.02■■■■■ 4.16
CHST1-202ENST00000531322 RSF1Q96T23 1441 aaPredicted RBP40.99■■■■■ 4.15
CHST1-202ENST00000531322 BAZ1BQ9UIG0 1483 aaKnown RBP40.92■■■■■ 4.14
CHST1-202ENST00000531322 WIZO95785 1651 aa40.85■■■■■ 4.13
CHST1-202ENST00000531322 TOP2AP11388 1531 aaKnown RBP40.48■■■■■ 4.07
CHST1-202ENST00000531322 SUPT5HO00267 1087 aaKnown RBP40.15■■■■■ 4.02
CHST1-202ENST00000531322 LAMC3Q9Y6N6 1575 aa40.05■■■■■ 4
CHST1-202ENST00000531322 NESP48681 1621 aa40.04■■■■■ 4
CHST1-202ENST00000531322 CADPSQ9ULU8 1353 aa40.03■■■■■ 4
CHST1-202ENST00000531322 CCDC88BA6NC98 1476 aa40.01■■■■■ 4
CHST1-202ENST00000531322 CFTRP13569 1480 aa39.85■■■■□ 3.97
CHST1-202ENST00000531322 ERCC6Q03468 1493 aa39.81■■■■□ 3.96
CHST1-202ENST00000531322 PDS5BQ9NTI5 1447 aa39.81■■■■□ 3.96
CHST1-202ENST00000531322 KIF21AQ7Z4S6 1674 aa39.55■■■■□ 3.92
CHST1-202ENST00000531322 FANCD2Q9BXW9 1451 aa39.53■■■■□ 3.92
CHST1-202ENST00000531322 PRDM2Q13029 1718 aa39.48■■■■□ 3.91
CHST1-202ENST00000531322 CEP164Q9UPV0 1460 aa39.45■■■■□ 3.91
CHST1-202ENST00000531322 THOC2Q8NI27 1593 aaKnown RBP39.37■■■■□ 3.89
CHST1-202ENST00000531322 MRC2Q9UBG0 1479 aa39.33■■■■□ 3.89
CHST1-202ENST00000531322 CUX2O14529 1486 aa39.32■■■■□ 3.88
CHST1-202ENST00000531322 WDR62O43379 1518 aa39.2■■■■□ 3.87
CHST1-202ENST00000531322 URB2Q14146 1524 aaKnown RBP39.1■■■■□ 3.85
CHST1-202ENST00000531322 ABCC8Q09428 1581 aa39.01■■■■□ 3.84
CHST1-202ENST00000531322 TOPBP1Q92547 1522 aa38.93■■■■□ 3.82
CHST1-202ENST00000531322 DNMBPQ6XZF7 1577 aa38.91■■■■□ 3.82
CHST1-202ENST00000531322 DNAJC5Q9H3Z4 198 aa38.83■■■■□ 3.81
CHST1-202ENST00000531322 CUX1P39880 1505 aa38.73■■■■□ 3.79
CHST1-202ENST00000531322 IFT140Q96RY7 1462 aa38.64■■■■□ 3.78
CHST1-202ENST00000531322 WRNQ14191 1432 aaPredicted RBP eCLIP38.64■■■■□ 3.78
CHST1-202ENST00000531322 POLA1P09884 1462 aaPredicted RBP38.63■■■■□ 3.77
CHST1-202ENST00000531322 FGD5Q6ZNL6 1462 aa38.56■■■■□ 3.76
CHST1-202ENST00000531322 TOP2BQ02880 1626 aa38.5■■■■□ 3.75
CHST1-202ENST00000531322 SOGA1O94964 1423 aa38.5■■■■□ 3.75
CHST1-202ENST00000531322 BIVM-ERCC5R4GMW8 1640 aa38.47■■■■□ 3.75
CHST1-202ENST00000531322 SYNJ1O43426 1573 aa38.47■■■■□ 3.75
CHST1-202ENST00000531322 TARBP1Q13395 1621 aaKnown RBP38.47■■■■□ 3.75
CHST1-202ENST00000531322 RAD54L2Q9Y4B4 1467 aa38.43■■■■□ 3.74
CHST1-202ENST00000531322 ZNF608Q9ULD9 1512 aaPredicted RBP38.39■■■■□ 3.74
CHST1-202ENST00000531322 ABCA10Q8WWZ4 1543 aa38.24■■■■□ 3.71
CHST1-202ENST00000531322 WDR97A6NE52 1622 aa38.24■■■■□ 3.71
CHST1-202ENST00000531322 AQRO60306 1485 aaKnown RBP eCLIP38.23■■■■□ 3.71
CHST1-202ENST00000531322 EIF4G3O43432 1585 aaKnown RBP38.23■■■■□ 3.71
CHST1-202ENST00000531322 TDRD9Q8NDG6 1382 aaKnown RBP38.22■■■■□ 3.71
CHST1-202ENST00000531322 GAPVD1Q14C86 1478 aa38.05■■■■□ 3.68
CHST1-202ENST00000531322 ABCA5Q8WWZ7 1642 aa38.01■■■■□ 3.68
CHST1-202ENST00000531322 GRIN2BQ13224 1484 aa38.01■■■■□ 3.68
CHST1-202ENST00000531322 TRIM41Q8WV44 630 aa37.96■■■■□ 3.67
CHST1-202ENST00000531322 MAGI1Q96QZ7 1491 aaPredicted RBP37.88■■■■□ 3.65
CHST1-202ENST00000531322 PBRM1Q86U86 1689 aa37.87■■■■□ 3.65
CHST1-202ENST00000531322 SNAPC4Q5SXM2 1469 aa37.86■■■■□ 3.65
CHST1-202ENST00000531322 KIF27Q86VH2 1401 aa37.83■■■■□ 3.65
CHST1-202ENST00000531322 ERICH3Q5RHP9 1530 aa37.79■■■■□ 3.64
CHST1-202ENST00000531322 OSCARQ8IYS5 282 aa37.78■■■■□ 3.64
CHST1-202ENST00000531322 FBLN2P98095 1184 aa37.72■■■■□ 3.63
CHST1-202ENST00000531322 SYNJ2O15056 1496 aa37.72■■■■□ 3.63
CHST1-202ENST00000531322 CHMP7Q8WUX9 453 aaPredicted RBP37.7■■■■□ 3.63
CHST1-202ENST00000531322 CHIC1Q5VXU3 224 aa37.68■■■■□ 3.62
CHST1-202ENST00000531322 CHD1O14646 1710 aa37.67■■■■□ 3.62
CHST1-202ENST00000531322 IGF1RP08069 1367 aa37.64■■■■□ 3.62
CHST1-202ENST00000531322 FHAD1B1AJZ9 1412 aa37.63■■■■□ 3.62
CHST1-202ENST00000531322 ADAMTS12P58397 1594 aa37.62■■■■□ 3.61
CHST1-202ENST00000531322 RUSC2Q8N2Y8 1516 aa37.51■■■■□ 3.59
CHST1-202ENST00000531322 GRIN2AQ12879 1464 aa37.5■■■■□ 3.59
CHST1-202ENST00000531322 CUL7Q14999 1698 aa37.48■■■■□ 3.59
CHST1-202ENST00000531322 CARMIL1Q5VZK9 1371 aa37.42■■■■□ 3.58
CHST1-202ENST00000531322 NUP160Q12769 1436 aa37.34■■■■□ 3.57
CHST1-202ENST00000531322 EEA1Q15075 1411 aa37.33■■■■□ 3.57
CHST1-202ENST00000531322 CLASP1Q7Z460 1538 aa37.31■■■■□ 3.56
CHST1-202ENST00000531322 CEP170Q5SW79 1584 aa37.26■■■■□ 3.56
CHST1-202ENST00000531322 CSRNP3Q8WYN3 585 aa37.24■■■■□ 3.55
CHST1-202ENST00000531322 RAPGEF2Q9Y4G8 1499 aa37.22■■■■□ 3.55
CHST1-202ENST00000531322 PRXQ9BXM0 1461 aa37.17■■■■□ 3.54
CHST1-202ENST00000531322 ARHGEF11O15085 1522 aa37.1■■■■□ 3.53
CHST1-202ENST00000531322 FAM9AQ8IZU1 332 aaPredicted RBP37.08■■■■□ 3.53
CHST1-202ENST00000531322 KIAA0586Q9BVV6 1533 aa37.08■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms