RNA–Protein interactions for RNA: ENST00000530354.1

AP004607.3-201, humanhuman

BASIC

Gene AP004607.3, Length 3,915 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004607.3-201ENST00000530354 NISCHQ9Y2I1 1504 aa12.9□□□□□ -0.35
AP004607.3-201ENST00000530354 DCAF8L2P0C7V8 631 aa11.16□□□□□ -0.62
AP004607.3-201ENST00000530354 CCDC180Q9P1Z9 1646 aa11.1□□□□□ -0.63
AP004607.3-201ENST00000530354 ABCC9O60706 1549 aa10.9□□□□□ -0.66
AP004607.3-201ENST00000530354 SHROOM4Q9ULL8 1493 aa10.81□□□□□ -0.68
AP004607.3-201ENST00000530354 ZCCHC6Q5VYS8 1495 aaKnown RBP10.77□□□□□ -0.68
AP004607.3-201ENST00000530354 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
AP004607.3-201ENST00000530354 NACADO15069 1562 aa10.47□□□□□ -0.73
AP004607.3-201ENST00000530354 RB1CC1Q8TDY2 1594 aa10.43□□□□□ -0.74
AP004607.3-201ENST00000530354 SUPT5HO00267 1087 aaKnown RBP10.43□□□□□ -0.74
AP004607.3-201ENST00000530354 SCRIBQ14160 1630 aa10.42□□□□□ -0.74
AP004607.3-201ENST00000530354 MYO15BQ96JP2 1530 aa10.41□□□□□ -0.74
AP004607.3-201ENST00000530354 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
AP004607.3-201ENST00000530354 CECR2Q9BXF3 1484 aa10.11□□□□□ -0.79
AP004607.3-201ENST00000530354 BICRAQ9NZM4 1560 aa10.05□□□□□ -0.8
AP004607.3-201ENST00000530354 UNC13AQ9UPW8 1703 aa10.05□□□□□ -0.8
AP004607.3-201ENST00000530354 RSF1Q96T23 1441 aaPredicted RBP10.04□□□□□ -0.8
AP004607.3-201ENST00000530354 MROH2BQ7Z745 1585 aa10□□□□□ -0.81
AP004607.3-201ENST00000530354 BAZ1AQ9NRL2 1556 aaPredicted RBP9.96□□□□□ -0.81
AP004607.3-201ENST00000530354 SMARCA4P51532 1647 aa9.88□□□□□ -0.83
AP004607.3-201ENST00000530354 WIZO95785 1651 aa9.88□□□□□ -0.83
AP004607.3-201ENST00000530354 EIF4G1Q04637 1599 aaKnown RBP9.83□□□□□ -0.84
AP004607.3-201ENST00000530354 ATAD2BQ9ULI0 1458 aa9.82□□□□□ -0.84
AP004607.3-201ENST00000530354 BAZ1BQ9UIG0 1483 aaKnown RBP9.81□□□□□ -0.84
AP004607.3-201ENST00000530354 CHIC1Q5VXU3 224 aa9.79□□□□□ -0.84
AP004607.3-201ENST00000530354 SMARCA2P51531 1590 aa9.77□□□□□ -0.85
AP004607.3-201ENST00000530354 TOP2AP11388 1531 aaKnown RBP9.74□□□□□ -0.85
AP004607.3-201ENST00000530354 TRIM41Q8WV44 630 aa9.74□□□□□ -0.85
AP004607.3-201ENST00000530354 CCDC88BA6NC98 1476 aa9.74□□□□□ -0.85
AP004607.3-201ENST00000530354 DNAJC5BQ9UF47 199 aa9.72□□□□□ -0.85
AP004607.3-201ENST00000530354 NCAPD3P42695 1498 aa9.72□□□□□ -0.85
AP004607.3-201ENST00000530354 CC2D2AQ9P2K1 1620 aa9.71□□□□□ -0.85
AP004607.3-201ENST00000530354 FAM9AQ8IZU1 332 aaPredicted RBP9.68□□□□□ -0.86
AP004607.3-201ENST00000530354 PEG3Q9GZU2 1588 aa9.67□□□□□ -0.86
AP004607.3-201ENST00000530354 EHMT2Q96KQ7 1210 aa9.65□□□□□ -0.86
AP004607.3-201ENST00000530354 HMGXB3Q12766 1538 aa9.62□□□□□ -0.87
AP004607.3-201ENST00000530354 CADPSQ9ULU8 1353 aa9.55□□□□□ -0.88
AP004607.3-201ENST00000530354 ABCC8Q09428 1581 aa9.53□□□□□ -0.88
AP004607.3-201ENST00000530354 LOC105371045A0A1W2PR82 267 aa9.52□□□□□ -0.89
AP004607.3-201ENST00000530354 WRNQ14191 1432 aaPredicted RBP eCLIP9.5□□□□□ -0.89
AP004607.3-201ENST00000530354 NESP48681 1621 aa9.5□□□□□ -0.89
AP004607.3-201ENST00000530354 CFTRP13569 1480 aa9.49□□□□□ -0.89
AP004607.3-201ENST00000530354 FANCD2Q9BXW9 1451 aa9.43□□□□□ -0.9
AP004607.3-201ENST00000530354 PDS5BQ9NTI5 1447 aa9.43□□□□□ -0.9
AP004607.3-201ENST00000530354 UBTFP17480 764 aaKnown RBP9.39□□□□□ -0.91
AP004607.3-201ENST00000530354 CSRNP3Q8WYN3 585 aa9.39□□□□□ -0.91
AP004607.3-201ENST00000530354 SOGA1O94964 1423 aa9.39□□□□□ -0.91
AP004607.3-201ENST00000530354 RANGAP1P46060 587 aaPredicted RBP9.38□□□□□ -0.91
AP004607.3-201ENST00000530354 ERCC6Q03468 1493 aa9.38□□□□□ -0.91
AP004607.3-201ENST00000530354 CEP164Q9UPV0 1460 aa9.37□□□□□ -0.91
AP004607.3-201ENST00000530354 SYNJ1O43426 1573 aa9.36□□□□□ -0.91
AP004607.3-201ENST00000530354 LAMC3Q9Y6N6 1575 aa9.35□□□□□ -0.91
AP004607.3-201ENST00000530354 RUSC2Q8N2Y8 1516 aa9.34□□□□□ -0.91
AP004607.3-201ENST00000530354 CUX1P39880 1505 aa9.33□□□□□ -0.92
AP004607.3-201ENST00000530354 FGD5Q6ZNL6 1462 aa9.29□□□□□ -0.92
AP004607.3-201ENST00000530354 CUX2O14529 1486 aa9.29□□□□□ -0.92
AP004607.3-201ENST00000530354 RAD54L2Q9Y4B4 1467 aa9.29□□□□□ -0.92
AP004607.3-201ENST00000530354 TOP2BQ02880 1626 aa9.29□□□□□ -0.92
AP004607.3-201ENST00000530354 KIF27Q86VH2 1401 aa9.28□□□□□ -0.92
AP004607.3-201ENST00000530354 TOPBP1Q92547 1522 aa9.28□□□□□ -0.92
AP004607.3-201ENST00000530354 TDRD9Q8NDG6 1382 aaKnown RBP9.28□□□□□ -0.92
AP004607.3-201ENST00000530354 URB2Q14146 1524 aaKnown RBP9.27□□□□□ -0.93
AP004607.3-201ENST00000530354 EEA1Q15075 1411 aa9.27□□□□□ -0.93
AP004607.3-201ENST00000530354 POLA1P09884 1462 aaPredicted RBP9.24□□□□□ -0.93
AP004607.3-201ENST00000530354 MRC2Q9UBG0 1479 aa9.24□□□□□ -0.93
AP004607.3-201ENST00000530354 DNMBPQ6XZF7 1577 aa9.24□□□□□ -0.93
AP004607.3-201ENST00000530354 FBLN2P98095 1184 aa9.23□□□□□ -0.93
AP004607.3-201ENST00000530354 KIF21AQ7Z4S6 1674 aa9.22□□□□□ -0.93
AP004607.3-201ENST00000530354 BIVM-ERCC5R4GMW8 1640 aa9.21□□□□□ -0.93
AP004607.3-201ENST00000530354 IGF1RP08069 1367 aa9.2□□□□□ -0.94
AP004607.3-201ENST00000530354 PRDM2Q13029 1718 aa9.2□□□□□ -0.94
AP004607.3-201ENST00000530354 CARMIL1Q5VZK9 1371 aa9.19□□□□□ -0.94
AP004607.3-201ENST00000530354 PPARGC1BQ86YN6 1023 aaKnown RBP9.19□□□□□ -0.94
AP004607.3-201ENST00000530354 TTBK1Q5TCY1 1321 aaPredicted RBP9.19□□□□□ -0.94
AP004607.3-201ENST00000530354 AQRO60306 1485 aaKnown RBP eCLIP9.18□□□□□ -0.94
AP004607.3-201ENST00000530354 GOLGA3Q08378 1498 aa9.18□□□□□ -0.94
AP004607.3-201ENST00000530354 RAPGEF2Q9Y4G8 1499 aa9.17□□□□□ -0.94
AP004607.3-201ENST00000530354 P3H3Q8IVL6 736 aa9.16□□□□□ -0.94
AP004607.3-201ENST00000530354 GAPVD1Q14C86 1478 aa9.15□□□□□ -0.94
AP004607.3-201ENST00000530354 TNIKQ9UKE5 1360 aa9.15□□□□□ -0.95
AP004607.3-201ENST00000530354 CHMP7Q8WUX9 453 aaPredicted RBP9.15□□□□□ -0.95
AP004607.3-201ENST00000530354 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.95
AP004607.3-201ENST00000530354 ATP1B4Q9UN42 357 aaPredicted RBP9.14□□□□□ -0.95
AP004607.3-201ENST00000530354 APLP2Q06481 763 aa9.12□□□□□ -0.95
AP004607.3-201ENST00000530354 IFT140Q96RY7 1462 aa9.12□□□□□ -0.95
AP004607.3-201ENST00000530354 ZNF608Q9ULD9 1512 aaPredicted RBP9.12□□□□□ -0.95
AP004607.3-201ENST00000530354 CEP162Q5TB80 1403 aa9.12□□□□□ -0.95
AP004607.3-201ENST00000530354 WDR62O43379 1518 aa9.11□□□□□ -0.95
AP004607.3-201ENST00000530354 PRXQ9BXM0 1461 aa9.1□□□□□ -0.95
AP004607.3-201ENST00000530354 CLIP1P30622 1438 aa9.09□□□□□ -0.95
AP004607.3-201ENST00000530354 GRIN2BQ13224 1484 aa9.07□□□□□ -0.96
AP004607.3-201ENST00000530354 PCGF6Q9BYE7 350 aa9.06□□□□□ -0.96
AP004607.3-201ENST00000530354 THOC2Q8NI27 1593 aaKnown RBP9.06□□□□□ -0.96
AP004607.3-201ENST00000530354 KIF21BO75037 1637 aa9.05□□□□□ -0.96
AP004607.3-201ENST00000530354 TARBP1Q13395 1621 aaKnown RBP9.04□□□□□ -0.96
AP004607.3-201ENST00000530354 FHAD1B1AJZ9 1412 aa9.03□□□□□ -0.96
AP004607.3-201ENST00000530354 SNAPC4Q5SXM2 1469 aa9.03□□□□□ -0.96
AP004607.3-201ENST00000530354 ERICH3Q5RHP9 1530 aa9.02□□□□□ -0.96
AP004607.3-201ENST00000530354 ARID3CA6NKF2 412 aa9.01□□□□□ -0.97
AP004607.3-201ENST00000530354 ABCA5Q8WWZ7 1642 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms