RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 NISCHQ9Y2I1 1504 aa41.95■■■■■ 4.31
CLP1-204ENST00000529773 CCDC180Q9P1Z9 1646 aa37.2■■■■□ 3.55
CLP1-204ENST00000529773 ABCC9O60706 1549 aa35.79■■■■□ 3.32
CLP1-204ENST00000529773 ZCCHC6Q5VYS8 1495 aaKnown RBP35.09■■■■□ 3.21
CLP1-204ENST00000529773 MYO15BQ96JP2 1530 aa34.86■■■■□ 3.17
CLP1-204ENST00000529773 DCAF1Q9Y4B6 1507 aa34.85■■■■□ 3.17
CLP1-204ENST00000529773 NACADO15069 1562 aa34.83■■■■□ 3.17
CLP1-204ENST00000529773 RB1CC1Q8TDY2 1594 aa34.73■■■■□ 3.15
CLP1-204ENST00000529773 DCAF8L2P0C7V8 631 aa34.53■■■■□ 3.12
CLP1-204ENST00000529773 UNC13AQ9UPW8 1703 aa33.96■■■■□ 3.03
CLP1-204ENST00000529773 SCRIBQ14160 1630 aa33.83■■■■□ 3.01
CLP1-204ENST00000529773 BICRAQ9NZM4 1560 aa33.7■■■□□ 2.99
CLP1-204ENST00000529773 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
CLP1-204ENST00000529773 PABPN1Q86U42 306 aaKnown RBP eCLIP33.43■■■□□ 2.94
CLP1-204ENST00000529773 EIF4G1Q04637 1599 aaKnown RBP32.75■■■□□ 2.83
CLP1-204ENST00000529773 CECR2Q9BXF3 1484 aa32.58■■■□□ 2.81
CLP1-204ENST00000529773 BAZ1AQ9NRL2 1556 aaPredicted RBP32.5■■■□□ 2.79
CLP1-204ENST00000529773 SMARCA4P51532 1647 aa32.48■■■□□ 2.79
CLP1-204ENST00000529773 CC2D2AQ9P2K1 1620 aa32.48■■■□□ 2.79
CLP1-204ENST00000529773 DNAJC5BQ9UF47 199 aa32.44■■■□□ 2.78
CLP1-204ENST00000529773 MROH2BQ7Z745 1585 aa32.31■■■□□ 2.76
CLP1-204ENST00000529773 PEG3Q9GZU2 1588 aa32.24■■■□□ 2.75
CLP1-204ENST00000529773 ATAD2BQ9ULI0 1458 aa32.18■■■□□ 2.74
CLP1-204ENST00000529773 SMARCA2P51531 1590 aa32.18■■■□□ 2.74
CLP1-204ENST00000529773 NCAPD3P42695 1498 aa32.12■■■□□ 2.73
CLP1-204ENST00000529773 RSF1Q96T23 1441 aaPredicted RBP32.09■■■□□ 2.73
CLP1-204ENST00000529773 HMGXB3Q12766 1538 aa32.05■■■□□ 2.72
CLP1-204ENST00000529773 WIZO95785 1651 aa31.96■■■□□ 2.71
CLP1-204ENST00000529773 BAZ1BQ9UIG0 1483 aaKnown RBP31.9■■■□□ 2.7
CLP1-204ENST00000529773 TOP2AP11388 1531 aaKnown RBP31.72■■■□□ 2.67
CLP1-204ENST00000529773 SUPT5HO00267 1087 aaKnown RBP31.34■■■□□ 2.61
CLP1-204ENST00000529773 CCDC88BA6NC98 1476 aa31.27■■■□□ 2.6
CLP1-204ENST00000529773 LAMC3Q9Y6N6 1575 aa31.21■■■□□ 2.59
CLP1-204ENST00000529773 CADPSQ9ULU8 1353 aa31.15■■■□□ 2.58
CLP1-204ENST00000529773 NESP48681 1621 aa31.13■■■□□ 2.57
CLP1-204ENST00000529773 CFTRP13569 1480 aa31.11■■■□□ 2.57
CLP1-204ENST00000529773 PRDM2Q13029 1718 aa30.95■■■□□ 2.54
CLP1-204ENST00000529773 PDS5BQ9NTI5 1447 aa30.92■■■□□ 2.54
CLP1-204ENST00000529773 KIF21AQ7Z4S6 1674 aa30.81■■■□□ 2.52
CLP1-204ENST00000529773 ERCC6Q03468 1493 aa30.81■■■□□ 2.52
CLP1-204ENST00000529773 FANCD2Q9BXW9 1451 aa30.79■■■□□ 2.52
CLP1-204ENST00000529773 CEP164Q9UPV0 1460 aa30.72■■■□□ 2.51
CLP1-204ENST00000529773 THOC2Q8NI27 1593 aaKnown RBP30.69■■■□□ 2.5
CLP1-204ENST00000529773 MRC2Q9UBG0 1479 aa30.61■■■□□ 2.49
CLP1-204ENST00000529773 WDR62O43379 1518 aa30.56■■■□□ 2.48
CLP1-204ENST00000529773 URB2Q14146 1524 aaKnown RBP30.48■■■□□ 2.47
CLP1-204ENST00000529773 CUX2O14529 1486 aa30.47■■■□□ 2.47
CLP1-204ENST00000529773 ABCC8Q09428 1581 aa30.41■■■□□ 2.46
CLP1-204ENST00000529773 DNMBPQ6XZF7 1577 aa30.4■■■□□ 2.46
CLP1-204ENST00000529773 TOPBP1Q92547 1522 aa30.37■■■□□ 2.45
CLP1-204ENST00000529773 CUX1P39880 1505 aa30.3■■■□□ 2.44
CLP1-204ENST00000529773 WRNQ14191 1432 aaPredicted RBP eCLIP30.22■■■□□ 2.43
CLP1-204ENST00000529773 BIVM-ERCC5R4GMW8 1640 aa30.2■■■□□ 2.43
CLP1-204ENST00000529773 TOP2BQ02880 1626 aa30.18■■■□□ 2.42
CLP1-204ENST00000529773 SYNJ1O43426 1573 aa30.17■■■□□ 2.42
CLP1-204ENST00000529773 POLA1P09884 1462 aaPredicted RBP30.14■■■□□ 2.42
CLP1-204ENST00000529773 FGD5Q6ZNL6 1462 aa30.11■■■□□ 2.41
CLP1-204ENST00000529773 IFT140Q96RY7 1462 aa30.08■■■□□ 2.41
CLP1-204ENST00000529773 TARBP1Q13395 1621 aaKnown RBP30.05■■■□□ 2.4
CLP1-204ENST00000529773 SOGA1O94964 1423 aa29.95■■■□□ 2.38
CLP1-204ENST00000529773 WDR97A6NE52 1622 aa29.94■■■□□ 2.38
CLP1-204ENST00000529773 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
CLP1-204ENST00000529773 ABCA10Q8WWZ4 1543 aa29.89■■■□□ 2.38
CLP1-204ENST00000529773 ZNF608Q9ULD9 1512 aaPredicted RBP29.86■■■□□ 2.37
CLP1-204ENST00000529773 EIF4G3O43432 1585 aaKnown RBP29.82■■■□□ 2.36
CLP1-204ENST00000529773 ABCA5Q8WWZ7 1642 aa29.77■■■□□ 2.36
CLP1-204ENST00000529773 AQRO60306 1485 aaKnown RBP eCLIP29.71■■■□□ 2.35
CLP1-204ENST00000529773 TDRD9Q8NDG6 1382 aaKnown RBP29.69■■■□□ 2.34
CLP1-204ENST00000529773 TRIM41Q8WV44 630 aa29.65■■■□□ 2.34
CLP1-204ENST00000529773 GAPVD1Q14C86 1478 aa29.65■■■□□ 2.34
CLP1-204ENST00000529773 CHIC1Q5VXU3 224 aa29.61■■■□□ 2.33
CLP1-204ENST00000529773 GRIN2BQ13224 1484 aa29.61■■■□□ 2.33
CLP1-204ENST00000529773 PBRM1Q86U86 1689 aa29.6■■■□□ 2.33
CLP1-204ENST00000529773 KIF27Q86VH2 1401 aa29.55■■■□□ 2.32
CLP1-204ENST00000529773 ERICH3Q5RHP9 1530 aa29.55■■■□□ 2.32
CLP1-204ENST00000529773 MAGI1Q96QZ7 1491 aaPredicted RBP29.53■■■□□ 2.32
CLP1-204ENST00000529773 SNAPC4Q5SXM2 1469 aa29.49■■■□□ 2.31
CLP1-204ENST00000529773 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
CLP1-204ENST00000529773 SYNJ2O15056 1496 aa29.38■■■□□ 2.29
CLP1-204ENST00000529773 IGF1RP08069 1367 aa29.38■■■□□ 2.29
CLP1-204ENST00000529773 RUSC2Q8N2Y8 1516 aa29.37■■■□□ 2.29
CLP1-204ENST00000529773 CUL7Q14999 1698 aa29.37■■■□□ 2.29
CLP1-204ENST00000529773 FHAD1B1AJZ9 1412 aa29.35■■■□□ 2.29
CLP1-204ENST00000529773 EEA1Q15075 1411 aa29.33■■■□□ 2.29
CLP1-204ENST00000529773 CHD1O14646 1710 aa29.33■■■□□ 2.29
CLP1-204ENST00000529773 GRIN2AQ12879 1464 aa29.24■■■□□ 2.27
CLP1-204ENST00000529773 CARMIL1Q5VZK9 1371 aa29.19■■■□□ 2.26
CLP1-204ENST00000529773 CHMP7Q8WUX9 453 aaPredicted RBP29.18■■■□□ 2.26
CLP1-204ENST00000529773 PRXQ9BXM0 1461 aa29.17■■■□□ 2.26
CLP1-204ENST00000529773 NUP160Q12769 1436 aa29.14■■■□□ 2.26
CLP1-204ENST00000529773 OSCARQ8IYS5 282 aa29.12■■■□□ 2.25
CLP1-204ENST00000529773 FBLN2P98095 1184 aa29.11■■■□□ 2.25
CLP1-204ENST00000529773 RAPGEF2Q9Y4G8 1499 aa29.1■■■□□ 2.25
CLP1-204ENST00000529773 CLASP1Q7Z460 1538 aa29.1■■■□□ 2.25
CLP1-204ENST00000529773 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
CLP1-204ENST00000529773 CSRNP3Q8WYN3 585 aa29.08■■■□□ 2.25
CLP1-204ENST00000529773 KIF21BO75037 1637 aa29.02■■■□□ 2.24
CLP1-204ENST00000529773 FAM9AQ8IZU1 332 aaPredicted RBP28.92■■■□□ 2.22
CLP1-204ENST00000529773 KIAA0586Q9BVV6 1533 aa28.92■■■□□ 2.22
CLP1-204ENST00000529773 DNAJC5Q9H3Z4 198 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms